EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002239 (Gene tree)
Gene ID: 100931138
Gene Symbol: NOP53
Alias: GLTSCR2|PICT-1|PICT1
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 8064 bases
Position: chrGL849940.1:26652-34715
Accession: 4333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002528	Nop53	PF07767.11	9.1e-82	1	1
ENSSHAP00000002529	Nop53	PF07767.11	4.4e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002556	NOP53-201	3883	-	ENSSHAP00000002528	411 (aa)	-	G3VH74
ENSSHAT00000002557	NOP53-202	3743	-	ENSSHAP00000002529	402 (aa)	-	G3VH75

Gene Model

Click here to download ENSSHAG00000002239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002239	NOP53	100	67.813	ENSG00000105373	NOP53	98	87.500	Homo_sapiens
ENSSHAG00000002239	NOP53	99	45.050	ENSAPOG00000006446	nop53	85	45.545	Acanthochromis_polyacanthus
ENSSHAG00000002239	NOP53	99	62.796	ENSAMEG00000015214	NOP53	85	63.397	Ailuropoda_melanoleuca
ENSSHAG00000002239	NOP53	86	43.490	ENSACIG00000002467	nop53	98	47.009	Amphilophus_citrinellus
ENSSHAG00000002239	NOP53	99	44.039	ENSAOCG00000007002	nop53	85	44.776	Amphiprion_ocellaris
ENSSHAG00000002239	NOP53	99	45.074	ENSAPEG00000024564	nop53	85	45.320	Amphiprion_percula
ENSSHAG00000002239	NOP53	95	45.802	ENSATEG00000021860	nop53	84	46.272	Anabas_testudineus
ENSSHAG00000002239	NOP53	71	61.224	ENSACAG00000011362	-	100	61.224	Anolis_carolinensis
ENSSHAG00000002239	NOP53	99	64.516	ENSANAG00000007933	NOP53	89	65.012	Aotus_nancymaae
ENSSHAG00000002239	NOP53	99	45.926	ENSACLG00000011832	nop53	85	45.926	Astatotilapia_calliptera
ENSSHAG00000002239	NOP53	99	47.407	ENSAMXG00000014883	nop53	85	48.649	Astyanax_mexicanus
ENSSHAG00000002239	NOP53	100	66.344	ENSBTAG00000021192	NOP53	77	67.317	Bos_taurus
ENSSHAG00000002239	NOP53	100	67.883	ENSCJAG00000011385	NOP53	84	68.627	Callithrix_jacchus
ENSSHAG00000002239	NOP53	99	66.505	ENSCAFG00000004080	NOP53	84	67.482	Canis_familiaris
ENSSHAG00000002239	NOP53	99	67.568	ENSCHIG00000009393	NOP53	84	68.564	Capra_hircus
ENSSHAG00000002239	NOP53	99	60.000	ENSTSYG00000036631	NOP53	82	60.794	Carlito_syrichta
ENSSHAG00000002239	NOP53	98	67.920	ENSCAPG00000013148	NOP53	99	67.929	Cavia_aperea
ENSSHAG00000002239	NOP53	99	67.488	ENSCPOG00000015665	NOP53	84	67.494	Cavia_porcellus
ENSSHAG00000002239	NOP53	100	68.550	ENSCCAG00000025477	NOP53	84	69.287	Cebus_capucinus
ENSSHAG00000002239	NOP53	100	68.796	ENSCATG00000032842	NOP53	84	69.059	Cercocebus_atys
ENSSHAG00000002239	NOP53	100	66.910	ENSCLAG00000001860	NOP53	84	66.910	Chinchilla_lanigera
ENSSHAG00000002239	NOP53	100	67.813	ENSCSAG00000002928	NOP53	84	68.564	Chlorocebus_sabaeus
ENSSHAG00000002239	NOP53	100	61.125	ENSCPBG00000009047	NOP53	96	63.300	Chrysemys_picta_bellii
ENSSHAG00000002239	NOP53	100	30.288	ENSCING00000021395	-	92	30.769	Ciona_intestinalis
ENSSHAG00000002239	NOP53	100	31.517	ENSCSAVG00000006009	-	91	32.143	Ciona_savignyi
ENSSHAG00000002239	NOP53	100	60.197	ENSCANG00000039648	NOP53	83	60.891	Colobus_angolensis_palliatus
ENSSHAG00000002239	NOP53	100	66.748	ENSCGRG00001019033	Nop53	85	67.153	Cricetulus_griseus_chok1gshd
ENSSHAG00000002239	NOP53	99	44.140	ENSCSEG00000014834	nop53	85	44.776	Cynoglossus_semilaevis
ENSSHAG00000002239	NOP53	99	45.477	ENSCVAG00000005940	nop53	85	46.929	Cyprinodon_variegatus
ENSSHAG00000002239	NOP53	99	50.856	ENSDARG00000100452	nop53	99	53.846	Danio_rerio
ENSSHAG00000002239	NOP53	100	68.796	ENSDNOG00000005165	NOP53	76	69.727	Dasypus_novemcinctus
ENSSHAG00000002239	NOP53	54	62.557	ENSDORG00000016339	-	74	62.791	Dipodomys_ordii
ENSSHAG00000002239	NOP53	63	32.830	FBgn0030061	CG1785	55	31.679	Drosophila_melanogaster
ENSSHAG00000002239	NOP53	52	68.981	ENSETEG00000003679	-	57	68.981	Echinops_telfairi
ENSSHAG00000002239	NOP53	100	41.294	ENSEBUG00000012747	nop53	85	43.223	Eptatretus_burgeri
ENSSHAG00000002239	NOP53	100	66.748	ENSEASG00005004345	NOP53	81	68.473	Equus_asinus_asinus
ENSSHAG00000002239	NOP53	100	66.184	ENSECAG00000026850	NOP53	81	67.883	Equus_caballus
ENSSHAG00000002239	NOP53	100	56.204	ENSEEUG00000005287	NOP53	84	57.353	Erinaceus_europaeus
ENSSHAG00000002239	NOP53	99	47.101	ENSELUG00000001525	nop53	86	47.420	Esox_lucius
ENSSHAG00000002239	NOP53	100	66.667	ENSFCAG00000010861	NOP53	85	67.640	Felis_catus
ENSSHAG00000002239	NOP53	99	54.808	ENSFDAG00000010478	NOP53	82	54.854	Fukomys_damarensis
ENSSHAG00000002239	NOP53	99	46.324	ENSFHEG00000017763	nop53	83	46.420	Fundulus_heteroclitus
ENSSHAG00000002239	NOP53	99	43.276	ENSGMOG00000014299	nop53	85	43.276	Gadus_morhua
ENSSHAG00000002239	NOP53	100	56.386	ENSGALG00000039473	NOP53	68	56.790	Gallus_gallus
ENSSHAG00000002239	NOP53	99	46.731	ENSGAFG00000013301	nop53	84	47.826	Gambusia_affinis
ENSSHAG00000002239	NOP53	99	44.526	ENSGACG00000005766	nop53	84	45.297	Gasterosteus_aculeatus
ENSSHAG00000002239	NOP53	99	62.779	ENSGGOG00000024728	-	84	64.810	Gorilla_gorilla
ENSSHAG00000002239	NOP53	88	70.556	ENSGGOG00000005462	NOP53	82	68.229	Gorilla_gorilla
ENSSHAG00000002239	NOP53	99	45.926	ENSHBUG00000023625	nop53	85	45.926	Haplochromis_burtoni
ENSSHAG00000002239	NOP53	99	65.931	ENSHGLG00000018240	NOP53	84	66.584	Heterocephalus_glaber_female
ENSSHAG00000002239	NOP53	84	79.528	ENSHGLG00100015613	NOP53	80	79.528	Heterocephalus_glaber_male
ENSSHAG00000002239	NOP53	99	42.619	ENSHCOG00000017133	nop53	85	43.269	Hippocampus_comes
ENSSHAG00000002239	NOP53	99	49.876	ENSIPUG00000008154	nop53	75	50.253	Ictalurus_punctatus
ENSSHAG00000002239	NOP53	100	67.813	ENSSTOG00000022092	NOP53	84	68.486	Ictidomys_tridecemlineatus
ENSSHAG00000002239	NOP53	99	66.667	ENSJJAG00000007854	Nop53	84	67.654	Jaculus_jaculus
ENSSHAG00000002239	NOP53	95	42.159	ENSKMAG00000020756	nop53	84	43.299	Kryptolebias_marmoratus
ENSSHAG00000002239	NOP53	99	44.526	ENSLBEG00000011432	nop53	85	44.526	Labrus_bergylta
ENSSHAG00000002239	NOP53	100	50.966	ENSLACG00000018320	NOP53	100	52.736	Latimeria_chalumnae
ENSSHAG00000002239	NOP53	99	46.914	ENSLOCG00000014178	nop53	85	49.114	Lepisosteus_oculatus
ENSSHAG00000002239	NOP53	100	68.215	ENSMFAG00000045103	NOP53	84	69.458	Macaca_fascicularis
ENSSHAG00000002239	NOP53	100	68.780	ENSMMUG00000013348	NOP53	98	87.500	Macaca_mulatta
ENSSHAG00000002239	NOP53	100	68.215	ENSMNEG00000042540	NOP53	81	69.458	Macaca_nemestrina
ENSSHAG00000002239	NOP53	99	58.250	ENSMLEG00000032475	NOP53	84	58.663	Mandrillus_leucophaeus
ENSSHAG00000002239	NOP53	99	45.455	ENSMAMG00000012652	nop53	85	45.833	Mastacembelus_armatus
ENSSHAG00000002239	NOP53	94	45.897	ENSMZEG00005005033	nop53	89	45.897	Maylandia_zebra
ENSSHAG00000002239	NOP53	100	66.667	ENSMAUG00000012617	Nop53	84	66.667	Mesocricetus_auratus
ENSSHAG00000002239	NOP53	99	68.719	ENSMICG00000005580	NOP53	88	69.479	Microcebus_murinus
ENSSHAG00000002239	NOP53	99	68.734	ENSMOCG00000008367	Nop53	84	68.812	Microtus_ochrogaster
ENSSHAG00000002239	NOP53	99	46.210	ENSMMOG00000006515	nop53	84	46.210	Mola_mola
ENSSHAG00000002239	NOP53	100	86.104	ENSMODG00000008721	NOP53	79	88.579	Monodelphis_domestica
ENSSHAG00000002239	NOP53	99	45.161	ENSMALG00000020350	nop53	81	46.750	Monopterus_albus
ENSSHAG00000002239	NOP53	100	67.312	MGP_CAROLIEiJ_G0029218	Nop53	100	71.809	Mus_caroli
ENSSHAG00000002239	NOP53	100	67.312	ENSMUSG00000041560	Nop53	85	68.049	Mus_musculus
ENSSHAG00000002239	NOP53	100	66.828	MGP_PahariEiJ_G0021074	-	100	71.277	Mus_pahari
ENSSHAG00000002239	NOP53	100	67.070	MGP_SPRETEiJ_G0030298	Nop53	100	71.809	Mus_spretus
ENSSHAG00000002239	NOP53	100	67.470	ENSMPUG00000004456	NOP53	85	67.718	Mustela_putorius_furo
ENSSHAG00000002239	NOP53	63	82.677	ENSMLUG00000027066	-	100	71.642	Myotis_lucifugus
ENSSHAG00000002239	NOP53	99	67.246	ENSNGAG00000019894	Nop53	84	67.250	Nannospalax_galili
ENSSHAG00000002239	NOP53	99	40.898	ENSNBRG00000002057	nop53	81	42.159	Neolamprologus_brichardi
ENSSHAG00000002239	NOP53	100	68.305	ENSNLEG00000003143	NOP53	84	69.059	Nomascus_leucogenys
ENSSHAG00000002239	NOP53	89	76.124	ENSMEUG00000002525	-	98	76.124	Notamacropus_eugenii
ENSSHAG00000002239	NOP53	99	65.937	ENSODEG00000006707	NOP53	84	67.241	Octodon_degus
ENSSHAG00000002239	NOP53	99	45.946	ENSONIG00000016624	nop53	85	45.946	Oreochromis_niloticus
ENSSHAG00000002239	NOP53	99	45.297	ENSORLG00000008659	nop53	84	46.040	Oryzias_latipes
ENSSHAG00000002239	NOP53	99	42.928	ENSORLG00020019916	nop53	81	45.013	Oryzias_latipes_hni
ENSSHAG00000002239	NOP53	99	46.420	ENSORLG00015001315	nop53	85	47.264	Oryzias_latipes_hsok
ENSSHAG00000002239	NOP53	99	47.174	ENSOMEG00000018244	nop53	85	47.343	Oryzias_melastigma
ENSSHAG00000002239	NOP53	99	81.579	ENSOGAG00000024300	NOP53	75	86.567	Otolemur_garnettii
ENSSHAG00000002239	NOP53	99	52.404	ENSOARG00000011414	NOP53	85	53.365	Ovis_aries
ENSSHAG00000002239	NOP53	88	61.111	ENSPPAG00000032995	-	80	57.292	Pan_paniscus
ENSSHAG00000002239	NOP53	99	62.408	ENSPPAG00000029337	-	83	63.291	Pan_paniscus
ENSSHAG00000002239	NOP53	100	65.848	ENSPPAG00000002927	-	84	66.584	Pan_paniscus
ENSSHAG00000002239	NOP53	100	66.667	ENSPPRG00000008954	NOP53	85	67.640	Panthera_pardus
ENSSHAG00000002239	NOP53	99	61.916	ENSPTRG00000052493	-	83	62.785	Pan_troglodytes
ENSSHAG00000002239	NOP53	99	63.704	ENSPTRG00000043520	-	84	64.428	Pan_troglodytes
ENSSHAG00000002239	NOP53	100	68.305	ENSPTRG00000011215	NOP53	84	69.059	Pan_troglodytes
ENSSHAG00000002239	NOP53	100	68.059	ENSPANG00000002964	NOP53	84	69.059	Papio_anubis
ENSSHAG00000002239	NOP53	99	46.829	ENSPKIG00000000127	nop53	84	47.619	Paramormyrops_kingsleyae
ENSSHAG00000002239	NOP53	99	45.255	ENSPMGG00000021579	nop53	85	46.329	Periophthalmus_magnuspinnatus
ENSSHAG00000002239	NOP53	100	68.039	ENSPEMG00000006856	Nop53	84	68.039	Peromyscus_maniculatus_bairdii
ENSSHAG00000002239	NOP53	54	37.445	ENSPMAG00000001501	-	81	38.182	Petromyzon_marinus
ENSSHAG00000002239	NOP53	99	83.831	ENSPCIG00000016718	NOP53	85	83.920	Phascolarctos_cinereus
ENSSHAG00000002239	NOP53	99	45.985	ENSPFOG00000002839	nop53	85	47.101	Poecilia_formosa
ENSSHAG00000002239	NOP53	54	44.843	ENSPLAG00000009285	-	66	44.843	Poecilia_latipinna
ENSSHAG00000002239	NOP53	99	45.985	ENSPLAG00000006675	nop53	85	47.101	Poecilia_latipinna
ENSSHAG00000002239	NOP53	54	44.843	ENSPMEG00000006978	nop53	66	44.395	Poecilia_mexicana
ENSSHAG00000002239	NOP53	99	45.966	ENSPMEG00000009589	nop53	85	47.317	Poecilia_mexicana
ENSSHAG00000002239	NOP53	99	40.786	ENSPREG00000008711	nop53	84	42.821	Poecilia_reticulata
ENSSHAG00000002239	NOP53	100	62.408	ENSPPYG00000010181	NOP53	83	63.119	Pongo_abelii
ENSSHAG00000002239	NOP53	89	72.802	ENSPCAG00000007692	NOP53	77	72.877	Procavia_capensis
ENSSHAG00000002239	NOP53	88	70.323	ENSPCOG00000016124	NOP53	82	61.905	Propithecus_coquereli
ENSSHAG00000002239	NOP53	70	69.962	ENSPVAG00000014671	NOP53	54	69.962	Pteropus_vampyrus
ENSSHAG00000002239	NOP53	99	45.926	ENSPNYG00000001341	nop53	85	45.926	Pundamilia_nyererei
ENSSHAG00000002239	NOP53	99	48.039	ENSPNAG00000012520	nop53	85	48.500	Pygocentrus_nattereri
ENSSHAG00000002239	NOP53	100	67.397	ENSRNOG00000013023	Nop53	84	67.892	Rattus_norvegicus
ENSSHAG00000002239	NOP53	100	68.059	ENSRBIG00000036427	NOP53	84	68.564	Rhinopithecus_bieti
ENSSHAG00000002239	NOP53	100	68.305	ENSRROG00000042298	NOP53	84	68.905	Rhinopithecus_roxellana
ENSSHAG00000002239	NOP53	100	68.059	ENSSBOG00000033115	NOP53	84	69.438	Saimiri_boliviensis_boliviensis
ENSSHAG00000002239	NOP53	99	48.020	ENSSFOG00015007062	gltscr2	85	48.241	Scleropages_formosus
ENSSHAG00000002239	NOP53	99	43.564	ENSSMAG00000000212	nop53	85	43.564	Scophthalmus_maximus
ENSSHAG00000002239	NOP53	99	45.658	ENSSDUG00000010575	nop53	85	46.154	Seriola_dumerili
ENSSHAG00000002239	NOP53	99	45.792	ENSSLDG00000000140	nop53	82	46.803	Seriola_lalandi_dorsalis
ENSSHAG00000002239	NOP53	84	68.622	ENSSARG00000014109	NOP53	72	68.328	Sorex_araneus
ENSSHAG00000002239	NOP53	97	51.000	ENSSPUG00000004420	NOP53	86	50.750	Sphenodon_punctatus
ENSSHAG00000002239	NOP53	99	43.392	ENSSPAG00000000318	nop53	89	44.359	Stegastes_partitus
ENSSHAG00000002239	NOP53	99	66.502	ENSSSCG00000022774	NOP53	84	67.494	Sus_scrofa
ENSSHAG00000002239	NOP53	99	47.922	ENSTRUG00000004944	nop53	85	47.922	Takifugu_rubripes
ENSSHAG00000002239	NOP53	77	78.740	ENSTBEG00000008708	NOP53	65	78.740	Tupaia_belangeri
ENSSHAG00000002239	NOP53	100	66.425	ENSTTRG00000011831	NOP53	85	67.397	Tursiops_truncatus
ENSSHAG00000002239	NOP53	99	64.563	ENSUAMG00000028254	NOP53	84	63.570	Ursus_americanus
ENSSHAG00000002239	NOP53	76	60.252	ENSVVUG00000023365	NOP53	62	61.093	Vulpes_vulpes
ENSSHAG00000002239	NOP53	96	63.248	ENSXETG00000002782	nop53	86	54.569	Xenopus_tropicalis
ENSSHAG00000002239	NOP53	99	45.700	ENSXCOG00000004436	nop53	85	46.985	Xiphophorus_couchianus
ENSSHAG00000002239	NOP53	99	46.437	ENSXMAG00000002589	nop53	85	47.549	Xiphophorus_maculatus