EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002463 (Gene tree)
Gene ID: 100922260
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 15347 bases
Position: chrGL867738.1:32908-48254
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002785	TruB_N	PF01509.18	2.9e-22	1	1
ENSSHAP00000002784	TruB_N	PF01509.18	2.7e-21	1	1
ENSSHAP00000002784	PUA	PF01472.20	2.5e-19	1	1
ENSSHAP00000002785	PUA	PF01472.20	2.5e-19	1	1
ENSSHAP00000002785	DKCLD	PF08068.12	1.1e-31	1	1
ENSSHAP00000002784	DKCLD	PF08068.12	1.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002815	DKC1-201	2611	-	ENSSHAP00000002784	507 (aa)	-	G3VHY0
ENSSHAT00000002816	DKC1-202	2529	-	ENSSHAP00000002785	473 (aa)	-	G3VHY1

Gene Model

Click here to download ENSSHAG00000002463's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002463	DKC1	97	85.776	ENSG00000130826	DKC1	99	92.683	Homo_sapiens
ENSSHAG00000002463	DKC1	90	83.372	ENSAPOG00000007799	dkc1	83	83.372	Acanthochromis_polyacanthus
ENSSHAG00000002463	DKC1	95	86.154	ENSAMEG00000002776	DKC1	90	86.154	Ailuropoda_melanoleuca
ENSSHAG00000002463	DKC1	84	86.364	ENSACIG00000022614	dkc1	92	80.000	Amphilophus_citrinellus
ENSSHAG00000002463	DKC1	90	83.138	ENSAOCG00000013159	dkc1	91	78.795	Amphiprion_ocellaris
ENSSHAG00000002463	DKC1	90	83.138	ENSAPEG00000002284	dkc1	91	78.795	Amphiprion_percula
ENSSHAG00000002463	DKC1	92	78.781	ENSATEG00000013682	dkc1	85	78.604	Anabas_testudineus
ENSSHAG00000002463	DKC1	98	83.190	ENSACAG00000015600	DKC1	80	83.333	Anolis_carolinensis
ENSSHAG00000002463	DKC1	97	86.609	ENSANAG00000022732	DKC1	89	86.842	Aotus_nancymaae
ENSSHAG00000002463	DKC1	84	86.181	ENSACLG00000015605	dkc1	81	86.181	Astatotilapia_calliptera
ENSSHAG00000002463	DKC1	92	81.922	ENSAMXG00000017108	dkc1	83	82.217	Astyanax_mexicanus
ENSSHAG00000002463	DKC1	97	86.334	ENSBTAG00000013045	DKC1	91	86.147	Bos_taurus
ENSSHAG00000002463	DKC1	87	65.860	WBGene00010478	K01G5.5	98	63.073	Caenorhabditis_elegans
ENSSHAG00000002463	DKC1	98	85.684	ENSCJAG00000004210	DKC1	89	86.842	Callithrix_jacchus
ENSSHAG00000002463	DKC1	91	76.538	ENSCAFG00000009311	-	86	76.538	Canis_familiaris
ENSSHAG00000002463	DKC1	95	84.946	ENSCAFG00000019620	-	90	84.946	Canis_familiaris
ENSSHAG00000002463	DKC1	95	84.946	ENSCAFG00020008918	-	90	84.946	Canis_lupus_dingo
ENSSHAG00000002463	DKC1	91	76.322	ENSCAFG00020009379	-	83	76.322	Canis_lupus_dingo
ENSSHAG00000002463	DKC1	97	86.768	ENSCHIG00000017392	DKC1	96	84.049	Capra_hircus
ENSSHAG00000002463	DKC1	96	84.289	ENSTSYG00000007681	DKC1	88	85.529	Carlito_syrichta
ENSSHAG00000002463	DKC1	86	87.192	ENSCAPG00000003342	DKC1	92	87.160	Cavia_aperea
ENSSHAG00000002463	DKC1	97	85.560	ENSCPOG00000008825	DKC1	90	85.376	Cavia_porcellus
ENSSHAG00000002463	DKC1	97	77.874	ENSCCAG00000027418	DKC1	88	78.070	Cebus_capucinus
ENSSHAG00000002463	DKC1	97	85.776	ENSCATG00000033602	DKC1	90	85.591	Cercocebus_atys
ENSSHAG00000002463	DKC1	92	87.302	ENSCLAG00000000720	DKC1	87	87.104	Chinchilla_lanigera
ENSSHAG00000002463	DKC1	97	85.129	ENSCSAG00000006706	DKC1	89	86.404	Chlorocebus_sabaeus
ENSSHAG00000002463	DKC1	92	87.215	ENSCPBG00000005858	DKC1	88	90.049	Chrysemys_picta_bellii
ENSSHAG00000002463	DKC1	86	76.355	ENSCING00000004599	-	77	77.889	Ciona_intestinalis
ENSSHAG00000002463	DKC1	89	74.588	ENSCSAVG00000010047	-	96	75.000	Ciona_savignyi
ENSSHAG00000002463	DKC1	97	85.129	ENSCANG00000027987	DKC1	89	86.404	Colobus_angolensis_palliatus
ENSSHAG00000002463	DKC1	97	86.057	ENSCGRG00001014574	-	89	86.404	Cricetulus_griseus_chok1gshd
ENSSHAG00000002463	DKC1	83	69.797	ENSCGRG00001016789	-	89	65.485	Cricetulus_griseus_chok1gshd
ENSSHAG00000002463	DKC1	97	86.057	ENSCGRG00000016075	-	89	86.404	Cricetulus_griseus_crigri
ENSSHAG00000002463	DKC1	83	69.797	ENSCGRG00000014809	-	87	65.485	Cricetulus_griseus_crigri
ENSSHAG00000002463	DKC1	85	85.360	ENSCSEG00000012633	dkc1	95	79.333	Cynoglossus_semilaevis
ENSSHAG00000002463	DKC1	84	86.329	ENSCVAG00000010155	dkc1	77	86.364	Cyprinodon_variegatus
ENSSHAG00000002463	DKC1	85	85.432	ENSDARG00000016484	dkc1	84	82.028	Danio_rerio
ENSSHAG00000002463	DKC1	97	86.364	ENSDNOG00000004218	DKC1	90	86.177	Dasypus_novemcinctus
ENSSHAG00000002463	DKC1	63	76.667	ENSDORG00000013566	-	100	76.667	Dipodomys_ordii
ENSSHAG00000002463	DKC1	93	68.397	FBgn0259937	Nop60B	89	68.473	Drosophila_melanogaster
ENSSHAG00000002463	DKC1	89	87.589	ENSETEG00000016095	DKC1	85	87.589	Echinops_telfairi
ENSSHAG00000002463	DKC1	70	76.877	ENSEBUG00000015962	dkc1	99	80.546	Eptatretus_burgeri
ENSSHAG00000002463	DKC1	97	84.713	ENSEASG00005007484	DKC1	95	82.996	Equus_asinus_asinus
ENSSHAG00000002463	DKC1	97	84.713	ENSECAG00000023524	DKC1	95	82.996	Equus_caballus
ENSSHAG00000002463	DKC1	89	85.681	ENSEEUG00000003323	DKC1	100	86.150	Erinaceus_europaeus
ENSSHAG00000002463	DKC1	93	81.136	ENSELUG00000014538	dkc1	89	79.499	Esox_lucius
ENSSHAG00000002463	DKC1	95	87.033	ENSFCAG00000006577	DKC1	90	87.033	Felis_catus
ENSSHAG00000002463	DKC1	92	83.636	ENSFALG00000011496	DKC1	84	83.636	Ficedula_albicollis
ENSSHAG00000002463	DKC1	92	87.472	ENSFDAG00000002516	DKC1	86	87.674	Fukomys_damarensis
ENSSHAG00000002463	DKC1	92	80.690	ENSFHEG00000004627	dkc1	91	77.462	Fundulus_heteroclitus
ENSSHAG00000002463	DKC1	83	83.632	ENSGMOG00000017277	dkc1	100	83.632	Gadus_morhua
ENSSHAG00000002463	DKC1	91	85.880	ENSGALG00000005054	DKC1	84	85.880	Gallus_gallus
ENSSHAG00000002463	DKC1	94	80.361	ENSGAFG00000011486	dkc1	78	78.462	Gambusia_affinis
ENSSHAG00000002463	DKC1	84	85.930	ENSGACG00000004373	dkc1	96	88.146	Gasterosteus_aculeatus
ENSSHAG00000002463	DKC1	92	87.443	ENSGAGG00000011330	DKC1	84	87.302	Gopherus_agassizii
ENSSHAG00000002463	DKC1	97	85.776	ENSGGOG00000001045	DKC1	89	87.061	Gorilla_gorilla
ENSSHAG00000002463	DKC1	85	86.035	ENSHBUG00000012436	dkc1	80	86.035	Haplochromis_burtoni
ENSSHAG00000002463	DKC1	94	86.860	ENSHGLG00000000649	DKC1	88	86.564	Heterocephalus_glaber_female
ENSSHAG00000002463	DKC1	90	88.084	ENSHGLG00100001153	DKC1	85	87.760	Heterocephalus_glaber_male
ENSSHAG00000002463	DKC1	93	81.549	ENSHCOG00000021099	dkc1	85	82.299	Hippocampus_comes
ENSSHAG00000002463	DKC1	92	80.734	ENSIPUG00000010309	dkc1	84	81.293	Ictalurus_punctatus
ENSSHAG00000002463	DKC1	97	85.161	ENSSTOG00000001074	-	94	86.275	Ictidomys_tridecemlineatus
ENSSHAG00000002463	DKC1	97	77.899	ENSSTOG00000020149	-	90	76.774	Ictidomys_tridecemlineatus
ENSSHAG00000002463	DKC1	97	74.893	ENSSTOG00000011904	-	86	74.732	Ictidomys_tridecemlineatus
ENSSHAG00000002463	DKC1	59	78.339	ENSJJAG00000010086	-	92	78.339	Jaculus_jaculus
ENSSHAG00000002463	DKC1	92	80.184	ENSKMAG00000008010	dkc1	86	79.634	Kryptolebias_marmoratus
ENSSHAG00000002463	DKC1	92	81.755	ENSLBEG00000019122	dkc1	87	82.176	Labrus_bergylta
ENSSHAG00000002463	DKC1	92	84.404	ENSLACG00000014025	DKC1	91	89.196	Latimeria_chalumnae
ENSSHAG00000002463	DKC1	94	82.432	ENSLOCG00000013713	dkc1	87	84.742	Lepisosteus_oculatus
ENSSHAG00000002463	DKC1	92	87.075	ENSLAFG00000000221	DKC1	85	88.046	Loxodonta_africana
ENSSHAG00000002463	DKC1	97	85.345	ENSMFAG00000032398	DKC1	76	86.623	Macaca_fascicularis
ENSSHAG00000002463	DKC1	97	85.129	ENSMMUG00000005768	DKC1	89	86.404	Macaca_mulatta
ENSSHAG00000002463	DKC1	97	85.129	ENSMNEG00000034503	DKC1	89	86.404	Macaca_nemestrina
ENSSHAG00000002463	DKC1	97	85.129	ENSMLEG00000034422	DKC1	89	86.404	Mandrillus_leucophaeus
ENSSHAG00000002463	DKC1	86	85.086	ENSMAMG00000005427	dkc1	90	85.891	Mastacembelus_armatus
ENSSHAG00000002463	DKC1	85	86.284	ENSMZEG00005014503	dkc1	80	86.284	Maylandia_zebra
ENSSHAG00000002463	DKC1	83	86.768	ENSMGAG00000009238	DKC1	87	85.786	Meleagris_gallopavo
ENSSHAG00000002463	DKC1	63	77.000	ENSMAUG00000016454	-	100	77.000	Mesocricetus_auratus
ENSSHAG00000002463	DKC1	85	77.262	ENSMICG00000002818	-	99	79.670	Microcebus_murinus
ENSSHAG00000002463	DKC1	97	84.934	ENSMICG00000038751	-	91	84.749	Microcebus_murinus
ENSSHAG00000002463	DKC1	63	74.667	ENSMOCG00000001169	-	100	74.667	Microtus_ochrogaster
ENSSHAG00000002463	DKC1	88	83.092	ENSMMOG00000020348	dkc1	90	83.092	Mola_mola
ENSSHAG00000002463	DKC1	96	94.702	ENSMODG00000009243	DKC1	78	95.333	Monodelphis_domestica
ENSSHAG00000002463	DKC1	92	81.193	ENSMALG00000009454	dkc1	84	81.007	Monopterus_albus
ENSSHAG00000002463	DKC1	92	76.244	MGP_CAROLIEiJ_G0033191	Dkc1	85	92.000	Mus_caroli
ENSSHAG00000002463	DKC1	97	85.621	ENSMUSG00000031403	Dkc1	100	76.667	Mus_musculus
ENSSHAG00000002463	DKC1	97	85.621	MGP_PahariEiJ_G0031735	Dkc1	100	76.667	Mus_pahari
ENSSHAG00000002463	DKC1	97	85.621	MGP_SPRETEiJ_G0034351	Dkc1	100	76.667	Mus_spretus
ENSSHAG00000002463	DKC1	96	84.797	ENSMPUG00000016136	DKC1	86	85.161	Mustela_putorius_furo
ENSSHAG00000002463	DKC1	97	81.330	ENSMLUG00000011918	DKC1	88	82.533	Myotis_lucifugus
ENSSHAG00000002463	DKC1	59	78.136	ENSNGAG00000015724	-	92	78.136	Nannospalax_galili
ENSSHAG00000002463	DKC1	84	87.121	ENSNBRG00000005638	dkc1	80	86.683	Neolamprologus_brichardi
ENSSHAG00000002463	DKC1	97	86.768	ENSNLEG00000014323	DKC1	89	87.118	Nomascus_leucogenys
ENSSHAG00000002463	DKC1	92	91.034	ENSMEUG00000001066	DKC1	98	89.462	Notamacropus_eugenii
ENSSHAG00000002463	DKC1	74	84.286	ENSOPRG00000005248	DKC1	70	84.286	Ochotona_princeps
ENSSHAG00000002463	DKC1	92	89.474	ENSODEG00000011816	-	89	87.500	Octodon_degus
ENSSHAG00000002463	DKC1	63	77.333	ENSODEG00000000549	-	100	77.333	Octodon_degus
ENSSHAG00000002463	DKC1	92	83.028	ENSONIG00000013889	dkc1	89	81.223	Oreochromis_niloticus
ENSSHAG00000002463	DKC1	90	89.720	ENSOANG00000008713	-	88	90.164	Ornithorhynchus_anatinus
ENSSHAG00000002463	DKC1	62	63.072	ENSOANG00000022295	-	84	63.366	Ornithorhynchus_anatinus
ENSSHAG00000002463	DKC1	97	85.991	ENSOCUG00000012646	DKC1	97	81.800	Oryctolagus_cuniculus
ENSSHAG00000002463	DKC1	91	79.724	ENSORLG00000018748	dkc1	89	77.384	Oryzias_latipes
ENSSHAG00000002463	DKC1	92	80.046	ENSOMEG00000005786	dkc1	82	84.100	Oryzias_melastigma
ENSSHAG00000002463	DKC1	97	85.563	ENSOGAG00000003399	DKC1	90	85.381	Otolemur_garnettii
ENSSHAG00000002463	DKC1	92	87.500	ENSOARG00000003047	DKC1	92	84.615	Ovis_aries
ENSSHAG00000002463	DKC1	94	87.751	ENSPPAG00000023820	DKC1	89	87.281	Pan_paniscus
ENSSHAG00000002463	DKC1	96	86.652	ENSPPRG00000009104	DKC1	90	87.033	Panthera_pardus
ENSSHAG00000002463	DKC1	91	86.207	ENSPTIG00000017469	DKC1	85	87.209	Panthera_tigris_altaica
ENSSHAG00000002463	DKC1	97	86.207	ENSPTRG00000043416	-	77	87.061	Pan_troglodytes
ENSSHAG00000002463	DKC1	97	85.776	ENSPTRG00000022449	DKC1	89	87.061	Pan_troglodytes
ENSSHAG00000002463	DKC1	97	85.129	ENSPANG00000011978	DKC1	89	86.404	Papio_anubis
ENSSHAG00000002463	DKC1	89	83.886	ENSPKIG00000008443	dkc1	89	82.670	Paramormyrops_kingsleyae
ENSSHAG00000002463	DKC1	75	92.717	ENSPSIG00000013765	DKC1	86	92.717	Pelodiscus_sinensis
ENSSHAG00000002463	DKC1	92	75.223	ENSPMGG00000004097	dkc1	83	74.723	Periophthalmus_magnuspinnatus
ENSSHAG00000002463	DKC1	77	88.205	ENSPEMG00000013348	Dkc1	89	52.248	Peromyscus_maniculatus_bairdii
ENSSHAG00000002463	DKC1	95	96.437	ENSPCIG00000016706	DKC1	76	96.035	Phascolarctos_cinereus
ENSSHAG00000002463	DKC1	92	80.690	ENSPFOG00000018653	dkc1	86	80.690	Poecilia_formosa
ENSSHAG00000002463	DKC1	92	80.876	ENSPLAG00000003272	dkc1	76	81.967	Poecilia_latipinna
ENSSHAG00000002463	DKC1	92	80.690	ENSPMEG00000010413	dkc1	90	78.982	Poecilia_mexicana
ENSSHAG00000002463	DKC1	93	80.455	ENSPREG00000004100	dkc1	83	82.243	Poecilia_reticulata
ENSSHAG00000002463	DKC1	93	86.682	ENSPPYG00000020892	DKC1	87	86.937	Pongo_abelii
ENSSHAG00000002463	DKC1	78	90.786	ENSPCAG00000015034	DKC1	72	90.786	Procavia_capensis
ENSSHAG00000002463	DKC1	97	85.560	ENSPCOG00000026874	DKC1	89	86.404	Propithecus_coquereli
ENSSHAG00000002463	DKC1	96	85.872	ENSPVAG00000009222	DKC1	89	86.253	Pteropus_vampyrus
ENSSHAG00000002463	DKC1	92	80.594	ENSPNYG00000020063	dkc1	87	80.045	Pundamilia_nyererei
ENSSHAG00000002463	DKC1	92	81.193	ENSPNAG00000005780	dkc1	83	82.407	Pygocentrus_nattereri
ENSSHAG00000002463	DKC1	94	80.942	ENSRNOG00000055562	Dkc1	86	81.549	Rattus_norvegicus
ENSSHAG00000002463	DKC1	97	85.129	ENSRBIG00000028457	DKC1	78	85.376	Rhinopithecus_bieti
ENSSHAG00000002463	DKC1	97	85.129	ENSRROG00000044780	DKC1	89	86.404	Rhinopithecus_roxellana
ENSSHAG00000002463	DKC1	81	69.974	YLR175W	-	93	63.252	Saccharomyces_cerevisiae
ENSSHAG00000002463	DKC1	96	87.061	ENSSBOG00000033746	DKC1	89	87.061	Saimiri_boliviensis_boliviensis
ENSSHAG00000002463	DKC1	93	80.995	ENSSFOG00015009585	dkc1	85	81.507	Scleropages_formosus
ENSSHAG00000002463	DKC1	98	78.664	ENSSMAG00000002552	dkc1	88	80.690	Scophthalmus_maximus
ENSSHAG00000002463	DKC1	92	83.141	ENSSDUG00000009963	dkc1	90	79.867	Seriola_dumerili
ENSSHAG00000002463	DKC1	83	88.295	ENSSLDG00000019342	dkc1	92	80.761	Seriola_lalandi_dorsalis
ENSSHAG00000002463	DKC1	91	81.881	ENSSARG00000001822	DKC1	87	82.569	Sorex_araneus
ENSSHAG00000002463	DKC1	99	82.590	ENSSPUG00000018907	DKC1	84	85.714	Sphenodon_punctatus
ENSSHAG00000002463	DKC1	84	87.595	ENSSPAG00000002585	dkc1	86	78.634	Stegastes_partitus
ENSSHAG00000002463	DKC1	92	83.002	ENSSSCG00000012823	DKC1	86	89.320	Sus_scrofa
ENSSHAG00000002463	DKC1	84	85.427	ENSTGUG00000006781	DKC1	90	84.198	Taeniopygia_guttata
ENSSHAG00000002463	DKC1	92	82.069	ENSTRUG00000004413	dkc1	85	82.599	Takifugu_rubripes
ENSSHAG00000002463	DKC1	92	66.440	ENSTNIG00000002582	dkc1	86	66.515	Tetraodon_nigroviridis
ENSSHAG00000002463	DKC1	62	85.099	ENSTBEG00000011262	DKC1	85	83.492	Tupaia_belangeri
ENSSHAG00000002463	DKC1	59	92.780	ENSTTRG00000008089	DKC1	55	92.780	Tursiops_truncatus
ENSSHAG00000002463	DKC1	86	91.111	ENSUAMG00000022721	DKC1	85	91.111	Ursus_americanus
ENSSHAG00000002463	DKC1	95	83.444	ENSUMAG00000016899	DKC1	98	87.871	Ursus_maritimus
ENSSHAG00000002463	DKC1	91	84.479	ENSVVUG00000020734	-	78	84.479	Vulpes_vulpes
ENSSHAG00000002463	DKC1	86	75.616	ENSVVUG00000021671	-	75	75.616	Vulpes_vulpes
ENSSHAG00000002463	DKC1	87	86.829	ENSXETG00000032517	DKC1	81	87.042	Xenopus_tropicalis
ENSSHAG00000002463	DKC1	93	80.455	ENSXCOG00000005498	dkc1	97	77.925	Xiphophorus_couchianus
ENSSHAG00000002463	DKC1	93	80.682	ENSXMAG00000004919	dkc1	91	78.761	Xiphophorus_maculatus