EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002506 (Gene tree)
Gene ID: 100931020
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 20434 bases
Position: chrGL841342.1:34045-54478
Accession: 17768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002830	Exo_endo_phos	PF03372.23	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002862	TDP2-201	4489	-	ENSSHAP00000002830	374 (aa)	-	G3VI26

Gene Model

Click here to download ENSSHAG00000002506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002506	TDP2	91	67.544	ENSG00000111802	TDP2	99	65.489	Homo_sapiens
ENSSHAG00000002506	TDP2	67	56.693	ENSAPOG00000018379	-	89	56.693	Acanthochromis_polyacanthus
ENSSHAG00000002506	TDP2	74	71.942	ENSAMEG00000010230	TDP2	99	71.942	Ailuropoda_melanoleuca
ENSSHAG00000002506	TDP2	68	54.651	ENSAPEG00000004208	-	92	54.651	Amphiprion_percula
ENSSHAG00000002506	TDP2	75	48.264	ENSATEG00000010663	-	94	48.264	Anabas_testudineus
ENSSHAG00000002506	TDP2	90	65.385	ENSACAG00000002332	TDP2	96	64.023	Anolis_carolinensis
ENSSHAG00000002506	TDP2	91	67.251	ENSANAG00000020033	TDP2	97	66.097	Aotus_nancymaae
ENSSHAG00000002506	TDP2	68	52.549	ENSACLG00000016174	tdp2b	86	52.549	Astatotilapia_calliptera
ENSSHAG00000002506	TDP2	67	56.863	ENSACLG00000016148	tdp2b	90	56.863	Astatotilapia_calliptera
ENSSHAG00000002506	TDP2	67	52.964	ENSACLG00000016132	tdp2b	85	52.964	Astatotilapia_calliptera
ENSSHAG00000002506	TDP2	91	53.117	ENSAMXG00000011775	tdp2b	97	53.117	Astyanax_mexicanus
ENSSHAG00000002506	TDP2	68	50.000	ENSAMXG00000036549	tdp2a	84	50.000	Astyanax_mexicanus
ENSSHAG00000002506	TDP2	91	68.895	ENSBTAG00000000365	TDP2	97	67.797	Bos_taurus
ENSSHAG00000002506	TDP2	89	30.588	WBGene00013405	tdpt-1	87	30.994	Caenorhabditis_elegans
ENSSHAG00000002506	TDP2	98	64.674	ENSCJAG00000006074	TDP2	99	64.674	Callithrix_jacchus
ENSSHAG00000002506	TDP2	95	64.972	ENSCJAG00000021963	-	98	64.972	Callithrix_jacchus
ENSSHAG00000002506	TDP2	94	65.460	ENSCAFG00000010428	TDP2	96	74.460	Canis_familiaris
ENSSHAG00000002506	TDP2	74	74.460	ENSCAFG00020009994	TDP2	96	74.460	Canis_lupus_dingo
ENSSHAG00000002506	TDP2	76	73.333	ENSCHIG00000015294	-	96	73.333	Capra_hircus
ENSSHAG00000002506	TDP2	83	70.000	ENSTSYG00000037199	TDP2	100	70.000	Carlito_syrichta
ENSSHAG00000002506	TDP2	91	70.088	ENSCPOG00000006390	TDP2	98	69.014	Cavia_porcellus
ENSSHAG00000002506	TDP2	95	66.102	ENSCCAG00000022734	TDP2	98	66.102	Cebus_capucinus
ENSSHAG00000002506	TDP2	91	67.836	ENSCATG00000022076	TDP2	91	73.022	Cercocebus_atys
ENSSHAG00000002506	TDP2	95	67.598	ENSCLAG00000002072	TDP2	99	67.598	Chinchilla_lanigera
ENSSHAG00000002506	TDP2	95	66.667	ENSCSAG00000007769	TDP2	98	66.667	Chlorocebus_sabaeus
ENSSHAG00000002506	TDP2	92	66.570	ENSCPBG00000006551	TDP2	94	63.784	Chrysemys_picta_bellii
ENSSHAG00000002506	TDP2	91	67.251	ENSCANG00000040122	TDP2	98	66.384	Colobus_angolensis_palliatus
ENSSHAG00000002506	TDP2	91	59.884	ENSCGRG00001000384	Tdp2	99	56.878	Cricetulus_griseus_chok1gshd
ENSSHAG00000002506	TDP2	91	57.602	ENSCGRG00000010250	Tdp2	98	57.423	Cricetulus_griseus_crigri
ENSSHAG00000002506	TDP2	91	54.391	ENSCVAG00000003114	tdp2b	95	53.824	Cyprinodon_variegatus
ENSSHAG00000002506	TDP2	90	52.762	ENSDARG00000035954	tdp2b	95	52.762	Danio_rerio
ENSSHAG00000002506	TDP2	66	51.429	ENSDARG00000069941	tdp2a	55	51.429	Danio_rerio
ENSSHAG00000002506	TDP2	95	66.667	ENSDNOG00000044082	TDP2	96	66.667	Dasypus_novemcinctus
ENSSHAG00000002506	TDP2	74	73.381	ENSETEG00000019096	TDP2	100	73.381	Echinops_telfairi
ENSSHAG00000002506	TDP2	67	51.181	ENSEBUG00000006535	tdp2a	59	51.181	Eptatretus_burgeri
ENSSHAG00000002506	TDP2	91	68.713	ENSEASG00005007656	TDP2	98	67.514	Equus_asinus_asinus
ENSSHAG00000002506	TDP2	91	69.388	ENSECAG00000014264	TDP2	98	68.169	Equus_caballus
ENSSHAG00000002506	TDP2	91	67.544	ENSEEUG00000010776	TDP2	97	66.477	Erinaceus_europaeus
ENSSHAG00000002506	TDP2	90	54.972	ENSELUG00000016449	tdp2b	95	54.972	Esox_lucius
ENSSHAG00000002506	TDP2	69	48.062	ENSELUG00000009321	tdp2a	80	48.062	Esox_lucius
ENSSHAG00000002506	TDP2	97	66.942	ENSFCAG00000025612	TDP2	99	66.942	Felis_catus
ENSSHAG00000002506	TDP2	92	60.933	ENSFALG00000004710	TDP2	97	60.556	Ficedula_albicollis
ENSSHAG00000002506	TDP2	74	75.357	ENSFDAG00000006512	TDP2	96	75.357	Fukomys_damarensis
ENSSHAG00000002506	TDP2	72	50.735	ENSFHEG00000013560	-	92	50.735	Fundulus_heteroclitus
ENSSHAG00000002506	TDP2	95	60.108	ENSGALG00000013637	TDP2	95	62.606	Gallus_gallus
ENSSHAG00000002506	TDP2	97	64.305	ENSGAGG00000002853	TDP2	93	64.305	Gopherus_agassizii
ENSSHAG00000002506	TDP2	91	67.251	ENSGGOG00000014237	TDP2	99	65.217	Gorilla_gorilla
ENSSHAG00000002506	TDP2	53	59.391	ENSHBUG00000005421	-	82	59.391	Haplochromis_burtoni
ENSSHAG00000002506	TDP2	90	55.271	ENSHBUG00000002714	tdp2b	94	55.271	Haplochromis_burtoni
ENSSHAG00000002506	TDP2	95	68.067	ENSHGLG00000008655	TDP2	98	68.067	Heterocephalus_glaber_female
ENSSHAG00000002506	TDP2	95	68.067	ENSHGLG00100019087	TDP2	98	68.067	Heterocephalus_glaber_male
ENSSHAG00000002506	TDP2	94	51.613	ENSIPUG00000013691	tdp2b	99	51.613	Ictalurus_punctatus
ENSSHAG00000002506	TDP2	93	58.405	ENSJJAG00000021685	Tdp2	98	58.405	Jaculus_jaculus
ENSSHAG00000002506	TDP2	68	54.297	ENSKMAG00000015485	-	82	54.297	Kryptolebias_marmoratus
ENSSHAG00000002506	TDP2	92	59.091	ENSLACG00000008852	TDP2	95	59.091	Latimeria_chalumnae
ENSSHAG00000002506	TDP2	74	60.289	ENSLOCG00000005817	tdp2b	99	60.289	Lepisosteus_oculatus
ENSSHAG00000002506	TDP2	91	68.129	ENSLAFG00000002567	TDP2	99	67.324	Loxodonta_africana
ENSSHAG00000002506	TDP2	91	68.129	ENSMFAG00000045296	TDP2	98	67.232	Macaca_fascicularis
ENSSHAG00000002506	TDP2	91	68.129	ENSMMUG00000009803	TDP2	98	67.232	Macaca_mulatta
ENSSHAG00000002506	TDP2	91	68.129	ENSMNEG00000038003	TDP2	98	67.232	Macaca_nemestrina
ENSSHAG00000002506	TDP2	91	68.129	ENSMLEG00000028883	TDP2	99	66.120	Mandrillus_leucophaeus
ENSSHAG00000002506	TDP2	95	53.804	ENSMAMG00000013654	tdp2b	99	53.804	Mastacembelus_armatus
ENSSHAG00000002506	TDP2	67	52.756	ENSMZEG00005004126	tdp2b	86	52.569	Maylandia_zebra
ENSSHAG00000002506	TDP2	68	52.490	ENSMZEG00005004055	tdp2b	86	52.490	Maylandia_zebra
ENSSHAG00000002506	TDP2	58	52.752	ENSMZEG00005003980	-	71	52.752	Maylandia_zebra
ENSSHAG00000002506	TDP2	67	56.299	ENSMZEG00005004077	tdp2b	86	56.299	Maylandia_zebra
ENSSHAG00000002506	TDP2	68	50.980	ENSMZEG00005004103	tdp2b	85	50.980	Maylandia_zebra
ENSSHAG00000002506	TDP2	67	56.522	ENSMZEG00005004153	tdp2b	89	56.522	Maylandia_zebra
ENSSHAG00000002506	TDP2	90	54.701	ENSMZEG00005003950	tdp2b	94	54.701	Maylandia_zebra
ENSSHAG00000002506	TDP2	96	60.372	ENSMGAG00000008014	TDP2	94	62.921	Meleagris_gallopavo
ENSSHAG00000002506	TDP2	91	58.841	ENSMAUG00000014451	Tdp2	99	56.117	Mesocricetus_auratus
ENSSHAG00000002506	TDP2	97	66.482	ENSMICG00000000039	TDP2	95	72.760	Microcebus_murinus
ENSSHAG00000002506	TDP2	91	60.819	ENSMOCG00000002823	Tdp2	99	58.177	Microtus_ochrogaster
ENSSHAG00000002506	TDP2	85	80.615	ENSMODG00000011653	TDP2	99	81.231	Monodelphis_domestica
ENSSHAG00000002506	TDP2	76	48.789	ENSMALG00000005368	-	98	48.789	Monopterus_albus
ENSSHAG00000002506	TDP2	93	60.345	MGP_CAROLIEiJ_G0018354	Tdp2	99	58.133	Mus_caroli
ENSSHAG00000002506	TDP2	99	58.021	ENSMUSG00000035958	Tdp2	99	58.021	Mus_musculus
ENSSHAG00000002506	TDP2	99	56.800	MGP_PahariEiJ_G0019417	Tdp2	99	56.800	Mus_pahari
ENSSHAG00000002506	TDP2	99	57.979	MGP_SPRETEiJ_G0019220	Tdp2	99	57.979	Mus_spretus
ENSSHAG00000002506	TDP2	91	66.764	ENSMPUG00000004516	TDP2	98	66.011	Mustela_putorius_furo
ENSSHAG00000002506	TDP2	90	66.071	ENSMLUG00000013506	TDP2	93	66.369	Myotis_lucifugus
ENSSHAG00000002506	TDP2	98	55.526	ENSNGAG00000001375	Tdp2	99	55.526	Nannospalax_galili
ENSSHAG00000002506	TDP2	95	65.449	ENSNLEG00000002447	TDP2	100	65.449	Nomascus_leucogenys
ENSSHAG00000002506	TDP2	93	67.919	ENSOPRG00000016299	TDP2	99	67.919	Ochotona_princeps
ENSSHAG00000002506	TDP2	76	73.852	ENSODEG00000014018	TDP2	96	73.852	Octodon_degus
ENSSHAG00000002506	TDP2	98	65.854	ENSOCUG00000013773	TDP2	99	65.854	Oryctolagus_cuniculus
ENSSHAG00000002506	TDP2	67	52.174	ENSORLG00000001661	-	92	52.174	Oryzias_latipes
ENSSHAG00000002506	TDP2	67	52.569	ENSORLG00020004634	-	92	52.569	Oryzias_latipes_hni
ENSSHAG00000002506	TDP2	67	47.451	ENSORLG00015008190	-	92	47.451	Oryzias_latipes_hsok
ENSSHAG00000002506	TDP2	70	49.237	ENSOMEG00000015899	-	97	49.237	Oryzias_melastigma
ENSSHAG00000002506	TDP2	95	66.384	ENSOGAG00000025303	TDP2	96	66.384	Otolemur_garnettii
ENSSHAG00000002506	TDP2	91	67.836	ENSPPAG00000029023	TDP2	92	73.022	Pan_paniscus
ENSSHAG00000002506	TDP2	97	66.667	ENSPPRG00000015398	TDP2	99	66.667	Panthera_pardus
ENSSHAG00000002506	TDP2	77	71.528	ENSPTIG00000018574	TDP2	99	71.528	Panthera_tigris_altaica
ENSSHAG00000002506	TDP2	91	67.836	ENSPTRG00000017778	TDP2	99	65.761	Pan_troglodytes
ENSSHAG00000002506	TDP2	91	67.836	ENSPANG00000017590	TDP2	98	66.949	Papio_anubis
ENSSHAG00000002506	TDP2	90	54.624	ENSPKIG00000006483	tdp2b	94	54.624	Paramormyrops_kingsleyae
ENSSHAG00000002506	TDP2	74	69.424	ENSPSIG00000004948	TDP2	96	69.424	Pelodiscus_sinensis
ENSSHAG00000002506	TDP2	91	59.475	ENSPEMG00000001788	Tdp2	99	57.838	Peromyscus_maniculatus_bairdii
ENSSHAG00000002506	TDP2	67	47.191	ENSPMAG00000001570	tdp2b	97	47.940	Petromyzon_marinus
ENSSHAG00000002506	TDP2	91	90.058	ENSPCIG00000007316	TDP2	95	85.675	Phascolarctos_cinereus
ENSSHAG00000002506	TDP2	71	50.735	ENSPFOG00000017990	-	97	50.735	Poecilia_formosa
ENSSHAG00000002506	TDP2	76	47.458	ENSPLAG00000019439	-	92	47.458	Poecilia_latipinna
ENSSHAG00000002506	TDP2	68	50.579	ENSPMEG00000010824	-	87	50.579	Poecilia_mexicana
ENSSHAG00000002506	TDP2	91	67.251	ENSPPYG00000016282	TDP2	95	64.096	Pongo_abelii
ENSSHAG00000002506	TDP2	91	68.328	ENSPCOG00000021415	TDP2	98	73.381	Propithecus_coquereli
ENSSHAG00000002506	TDP2	90	54.416	ENSPNYG00000011532	tdp2b	94	54.416	Pundamilia_nyererei
ENSSHAG00000002506	TDP2	67	52.788	ENSPNYG00000011504	tdp2b	88	52.788	Pundamilia_nyererei
ENSSHAG00000002506	TDP2	66	52.653	ENSPNAG00000022162	tdp2a	62	52.653	Pygocentrus_nattereri
ENSSHAG00000002506	TDP2	91	58.480	ENSRNOG00000018246	Tdp2	99	56.831	Rattus_norvegicus
ENSSHAG00000002506	TDP2	91	66.959	ENSRBIG00000037119	TDP2	92	72.302	Rhinopithecus_bieti
ENSSHAG00000002506	TDP2	98	63.957	ENSRROG00000005025	TDP2	92	71.942	Rhinopithecus_roxellana
ENSSHAG00000002506	TDP2	95	66.667	ENSSBOG00000028734	TDP2	91	72.662	Saimiri_boliviensis_boliviensis
ENSSHAG00000002506	TDP2	72	52.381	ENSSFOG00015011322	-	78	50.896	Scleropages_formosus
ENSSHAG00000002506	TDP2	74	71.429	ENSSARG00000013547	TDP2	100	71.429	Sorex_araneus
ENSSHAG00000002506	TDP2	92	61.473	ENSSPUG00000008288	TDP2	100	59.358	Sphenodon_punctatus
ENSSHAG00000002506	TDP2	91	70.760	ENSSSCG00000001092	TDP2	97	69.014	Sus_scrofa
ENSSHAG00000002506	TDP2	70	69.615	ENSTGUG00000009035	TDP2	99	69.615	Taeniopygia_guttata
ENSSHAG00000002506	TDP2	90	53.409	ENSTRUG00000014347	tdp2b	95	53.409	Takifugu_rubripes
ENSSHAG00000002506	TDP2	68	53.906	ENSTRUG00000012218	-	89	53.906	Takifugu_rubripes
ENSSHAG00000002506	TDP2	68	54.086	ENSTNIG00000010260	TDP2	97	54.086	Tetraodon_nigroviridis
ENSSHAG00000002506	TDP2	92	51.955	ENSTNIG00000017792	tdp2b	96	51.955	Tetraodon_nigroviridis
ENSSHAG00000002506	TDP2	91	68.696	ENSTTRG00000016376	TDP2	98	67.514	Tursiops_truncatus
ENSSHAG00000002506	TDP2	95	62.849	ENSUAMG00000025939	TDP2	99	62.849	Ursus_americanus
ENSSHAG00000002506	TDP2	74	71.942	ENSUMAG00000020111	TDP2	93	71.942	Ursus_maritimus
ENSSHAG00000002506	TDP2	93	59.341	ENSXETG00000014826	tdp2	96	59.341	Xenopus_tropicalis
ENSSHAG00000002506	TDP2	67	52.362	ENSXCOG00000010778	-	70	52.362	Xiphophorus_couchianus
ENSSHAG00000002506	TDP2	67	52.362	ENSXMAG00000022252	-	73	52.362	Xiphophorus_maculatus