EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002529 (Gene tree)
Gene ID: 100915790
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 16757 bases
Position: chrGL861655.1:34569-51325
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002854	zf-C3HC	PF07967.13	7.8e-34	1	1
ENSSHAP00000002854	Rsm1	PF08600.10	3.6e-16	1	2
ENSSHAP00000002854	Rsm1	PF08600.10	3.6e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002887	ZC3HC1-201	1398	-	ENSSHAP00000002854	465 (aa)	-	G3VI50

Gene Model

Click here to download ENSSHAG00000002529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002529	ZC3HC1	99	78.664	ENSG00000091732	ZC3HC1	94	79.515	Homo_sapiens
ENSSHAG00000002529	ZC3HC1	98	43.542	ENSAPOG00000009078	zc3hc1	87	44.737	Acanthochromis_polyacanthus
ENSSHAG00000002529	ZC3HC1	100	79.140	ENSAMEG00000005425	ZC3HC1	92	79.140	Ailuropoda_melanoleuca
ENSSHAG00000002529	ZC3HC1	98	42.171	ENSACIG00000019513	zc3hc1	87	43.202	Amphilophus_citrinellus
ENSSHAG00000002529	ZC3HC1	93	44.298	ENSAOCG00000024310	zc3hc1	87	44.298	Amphiprion_ocellaris
ENSSHAG00000002529	ZC3HC1	93	44.298	ENSAPEG00000004907	zc3hc1	87	44.298	Amphiprion_percula
ENSSHAG00000002529	ZC3HC1	88	45.882	ENSATEG00000016898	zc3hc1	85	46.495	Anabas_testudineus
ENSSHAG00000002529	ZC3HC1	95	60.850	ENSAPLG00000003832	ZC3HC1	99	60.850	Anas_platyrhynchos
ENSSHAG00000002529	ZC3HC1	100	62.316	ENSACAG00000001638	ZC3HC1	92	62.316	Anolis_carolinensis
ENSSHAG00000002529	ZC3HC1	100	77.634	ENSANAG00000022213	ZC3HC1	99	74.146	Aotus_nancymaae
ENSSHAG00000002529	ZC3HC1	93	43.902	ENSACLG00000025033	zc3hc1	94	43.902	Astatotilapia_calliptera
ENSSHAG00000002529	ZC3HC1	92	45.662	ENSAMXG00000036792	zc3hc1	87	45.662	Astyanax_mexicanus
ENSSHAG00000002529	ZC3HC1	100	76.559	ENSBTAG00000011247	ZC3HC1	92	76.559	Bos_taurus
ENSSHAG00000002529	ZC3HC1	100	78.280	ENSCJAG00000010536	ZC3HC1	99	73.171	Callithrix_jacchus
ENSSHAG00000002529	ZC3HC1	100	78.970	ENSCAFG00000001499	-	91	78.970	Canis_familiaris
ENSSHAG00000002529	ZC3HC1	100	78.710	ENSCAFG00000028735	-	92	78.710	Canis_familiaris
ENSSHAG00000002529	ZC3HC1	100	78.925	ENSCAFG00000031850	-	92	78.925	Canis_familiaris
ENSSHAG00000002529	ZC3HC1	100	78.710	ENSCAFG00000029401	-	91	78.710	Canis_familiaris
ENSSHAG00000002529	ZC3HC1	100	78.710	ENSCAFG00020006829	-	92	78.710	Canis_lupus_dingo
ENSSHAG00000002529	ZC3HC1	100	77.634	ENSCAFG00020023333	-	92	77.634	Canis_lupus_dingo
ENSSHAG00000002529	ZC3HC1	100	70.538	ENSCHIG00000014103	ZC3HC1	92	70.538	Capra_hircus
ENSSHAG00000002529	ZC3HC1	100	76.989	ENSTSYG00000002843	ZC3HC1	92	76.989	Carlito_syrichta
ENSSHAG00000002529	ZC3HC1	98	56.987	ENSCAPG00000016300	ZC3HC1	100	56.332	Cavia_aperea
ENSSHAG00000002529	ZC3HC1	100	73.978	ENSCPOG00000014034	ZC3HC1	91	77.888	Cavia_porcellus
ENSSHAG00000002529	ZC3HC1	99	61.087	ENSCCAG00000020384	ZC3HC1	100	75.771	Cebus_capucinus
ENSSHAG00000002529	ZC3HC1	100	78.495	ENSCATG00000023130	ZC3HC1	97	78.022	Cercocebus_atys
ENSSHAG00000002529	ZC3HC1	89	59.951	ENSCLAG00000008260	ZC3HC1	88	59.709	Chinchilla_lanigera
ENSSHAG00000002529	ZC3HC1	79	77.322	ENSCSAG00000009881	ZC3HC1	97	77.322	Chlorocebus_sabaeus
ENSSHAG00000002529	ZC3HC1	97	81.015	ENSCHOG00000011846	ZC3HC1	99	81.015	Choloepus_hoffmanni
ENSSHAG00000002529	ZC3HC1	100	68.951	ENSCPBG00000017519	ZC3HC1	93	68.951	Chrysemys_picta_bellii
ENSSHAG00000002529	ZC3HC1	50	32.083	ENSCING00000004440	-	56	32.083	Ciona_intestinalis
ENSSHAG00000002529	ZC3HC1	100	78.065	ENSCANG00000029091	ZC3HC1	99	72.195	Colobus_angolensis_palliatus
ENSSHAG00000002529	ZC3HC1	100	76.774	ENSCGRG00001018805	Zc3hc1	92	76.774	Cricetulus_griseus_chok1gshd
ENSSHAG00000002529	ZC3HC1	100	75.699	ENSCGRG00000017114	Zc3hc1	92	75.699	Cricetulus_griseus_crigri
ENSSHAG00000002529	ZC3HC1	99	42.437	ENSCSEG00000009284	zc3hc1	85	43.805	Cynoglossus_semilaevis
ENSSHAG00000002529	ZC3HC1	97	42.521	ENSCVAG00000011566	zc3hc1	89	42.612	Cyprinodon_variegatus
ENSSHAG00000002529	ZC3HC1	93	49.438	ENSDARG00000062651	zc3hc1	86	49.438	Danio_rerio
ENSSHAG00000002529	ZC3HC1	100	78.710	ENSDNOG00000045016	ZC3HC1	92	78.710	Dasypus_novemcinctus
ENSSHAG00000002529	ZC3HC1	99	71.739	ENSDORG00000008697	Zc3hc1	91	76.540	Dipodomys_ordii
ENSSHAG00000002529	ZC3HC1	98	80.396	ENSEASG00005008789	ZC3HC1	97	80.396	Equus_asinus_asinus
ENSSHAG00000002529	ZC3HC1	100	79.399	ENSECAG00000017886	ZC3HC1	90	80.396	Equus_caballus
ENSSHAG00000002529	ZC3HC1	72	74.419	ENSEEUG00000003123	ZC3HC1	66	74.419	Erinaceus_europaeus
ENSSHAG00000002529	ZC3HC1	97	44.118	ENSELUG00000023168	zc3hc1	89	45.877	Esox_lucius
ENSSHAG00000002529	ZC3HC1	100	78.065	ENSFCAG00000010429	ZC3HC1	96	77.582	Felis_catus
ENSSHAG00000002529	ZC3HC1	98	61.111	ENSFALG00000005006	ZC3HC1	100	61.111	Ficedula_albicollis
ENSSHAG00000002529	ZC3HC1	99	76.522	ENSFDAG00000019897	ZC3HC1	90	76.923	Fukomys_damarensis
ENSSHAG00000002529	ZC3HC1	94	43.142	ENSFHEG00000020149	zc3hc1	87	42.762	Fundulus_heteroclitus
ENSSHAG00000002529	ZC3HC1	99	40.512	ENSGMOG00000002914	zc3hc1	87	41.324	Gadus_morhua
ENSSHAG00000002529	ZC3HC1	99	63.871	ENSGALG00000008003	ZC3HC1	91	64.396	Gallus_gallus
ENSSHAG00000002529	ZC3HC1	94	43.392	ENSGAFG00000016095	zc3hc1	88	43.392	Gambusia_affinis
ENSSHAG00000002529	ZC3HC1	93	46.205	ENSGACG00000019706	zc3hc1	87	46.222	Gasterosteus_aculeatus
ENSSHAG00000002529	ZC3HC1	84	70.844	ENSGAGG00000016106	ZC3HC1	100	70.844	Gopherus_agassizii
ENSSHAG00000002529	ZC3HC1	99	78.448	ENSGGOG00000015504	ZC3HC1	94	79.295	Gorilla_gorilla
ENSSHAG00000002529	ZC3HC1	93	43.681	ENSHBUG00000008347	zc3hc1	87	43.681	Haplochromis_burtoni
ENSSHAG00000002529	ZC3HC1	99	77.609	ENSHGLG00000005085	ZC3HC1	90	78.022	Heterocephalus_glaber_female
ENSSHAG00000002529	ZC3HC1	99	77.391	ENSHGLG00100011395	ZC3HC1	90	77.802	Heterocephalus_glaber_male
ENSSHAG00000002529	ZC3HC1	93	43.607	ENSHCOG00000014309	zc3hc1	86	44.419	Hippocampus_comes
ENSSHAG00000002529	ZC3HC1	99	77.322	ENSSTOG00000023599	-	92	77.322	Ictidomys_tridecemlineatus
ENSSHAG00000002529	ZC3HC1	93	44.643	ENSKMAG00000015315	zc3hc1	81	44.420	Kryptolebias_marmoratus
ENSSHAG00000002529	ZC3HC1	92	44.956	ENSLBEG00000017325	zc3hc1	92	44.956	Labrus_bergylta
ENSSHAG00000002529	ZC3HC1	77	57.909	ENSLACG00000013032	ZC3HC1	88	57.796	Latimeria_chalumnae
ENSSHAG00000002529	ZC3HC1	93	54.195	ENSLOCG00000015963	zc3hc1	87	54.751	Lepisosteus_oculatus
ENSSHAG00000002529	ZC3HC1	100	77.730	ENSLAFG00000001292	ZC3HC1	92	77.730	Loxodonta_africana
ENSSHAG00000002529	ZC3HC1	100	78.495	ENSMFAG00000030176	ZC3HC1	97	78.022	Macaca_fascicularis
ENSSHAG00000002529	ZC3HC1	100	77.634	ENSMMUG00000006155	ZC3HC1	99	77.808	Macaca_mulatta
ENSSHAG00000002529	ZC3HC1	100	78.710	ENSMNEG00000011833	ZC3HC1	97	78.242	Macaca_nemestrina
ENSSHAG00000002529	ZC3HC1	100	78.495	ENSMLEG00000027328	ZC3HC1	98	77.596	Mandrillus_leucophaeus
ENSSHAG00000002529	ZC3HC1	93	44.098	ENSMAMG00000010691	zc3hc1	87	44.124	Mastacembelus_armatus
ENSSHAG00000002529	ZC3HC1	93	43.902	ENSMZEG00005007142	zc3hc1	87	43.902	Maylandia_zebra
ENSSHAG00000002529	ZC3HC1	99	63.191	ENSMGAG00000002977	ZC3HC1	93	64.468	Meleagris_gallopavo
ENSSHAG00000002529	ZC3HC1	88	70.602	ENSMAUG00000017032	Zc3hc1	92	70.602	Mesocricetus_auratus
ENSSHAG00000002529	ZC3HC1	100	78.710	ENSMICG00000009167	ZC3HC1	92	78.710	Microcebus_murinus
ENSSHAG00000002529	ZC3HC1	100	74.624	ENSMOCG00000015239	Zc3hc1	92	74.624	Microtus_ochrogaster
ENSSHAG00000002529	ZC3HC1	94	41.447	ENSMMOG00000002204	zc3hc1	99	41.228	Mola_mola
ENSSHAG00000002529	ZC3HC1	100	71.843	ENSMODG00000014630	ZC3HC1	92	71.843	Monodelphis_domestica
ENSSHAG00000002529	ZC3HC1	92	44.743	ENSMALG00000014447	zc3hc1	87	44.812	Monopterus_albus
ENSSHAG00000002529	ZC3HC1	100	74.624	MGP_CAROLIEiJ_G0028183	Zc3hc1	92	74.624	Mus_caroli
ENSSHAG00000002529	ZC3HC1	100	74.839	ENSMUSG00000039130	Zc3hc1	92	74.839	Mus_musculus
ENSSHAG00000002529	ZC3HC1	100	68.817	MGP_PahariEiJ_G0021941	Zc3hc1	92	68.817	Mus_pahari
ENSSHAG00000002529	ZC3HC1	100	75.054	MGP_SPRETEiJ_G0029183	Zc3hc1	92	75.054	Mus_spretus
ENSSHAG00000002529	ZC3HC1	95	78.330	ENSMPUG00000005297	ZC3HC1	87	78.330	Mustela_putorius_furo
ENSSHAG00000002529	ZC3HC1	100	78.112	ENSMLUG00000000063	-	92	78.112	Myotis_lucifugus
ENSSHAG00000002529	ZC3HC1	72	71.848	ENSMLUG00000029228	-	99	71.848	Myotis_lucifugus
ENSSHAG00000002529	ZC3HC1	100	77.682	ENSNGAG00000019014	Zc3hc1	92	77.682	Nannospalax_galili
ENSSHAG00000002529	ZC3HC1	93	43.653	ENSNBRG00000004577	zc3hc1	87	43.653	Neolamprologus_brichardi
ENSSHAG00000002529	ZC3HC1	99	77.586	ENSNLEG00000012698	ZC3HC1	98	77.198	Nomascus_leucogenys
ENSSHAG00000002529	ZC3HC1	100	91.613	ENSMEUG00000011023	ZC3HC1	92	91.613	Notamacropus_eugenii
ENSSHAG00000002529	ZC3HC1	62	73.303	ENSOPRG00000007867	-	59	73.303	Ochotona_princeps
ENSSHAG00000002529	ZC3HC1	100	73.548	ENSODEG00000014604	ZC3HC1	92	73.118	Octodon_degus
ENSSHAG00000002529	ZC3HC1	93	44.346	ENSONIG00000011644	zc3hc1	87	44.150	Oreochromis_niloticus
ENSSHAG00000002529	ZC3HC1	98	70.474	ENSOANG00000011460	ZC3HC1	100	70.474	Ornithorhynchus_anatinus
ENSSHAG00000002529	ZC3HC1	100	75.966	ENSOCUG00000017137	ZC3HC1	92	75.966	Oryctolagus_cuniculus
ENSSHAG00000002529	ZC3HC1	93	43.722	ENSORLG00000014409	zc3hc1	86	43.722	Oryzias_latipes
ENSSHAG00000002529	ZC3HC1	93	43.722	ENSORLG00020015874	zc3hc1	86	43.722	Oryzias_latipes_hni
ENSSHAG00000002529	ZC3HC1	93	43.498	ENSORLG00015014641	zc3hc1	86	43.498	Oryzias_latipes_hsok
ENSSHAG00000002529	ZC3HC1	93	45.495	ENSOMEG00000000215	zc3hc1	87	45.434	Oryzias_melastigma
ENSSHAG00000002529	ZC3HC1	93	45.287	ENSOMEG00000020604	zc3hc1	87	45.227	Oryzias_melastigma
ENSSHAG00000002529	ZC3HC1	100	72.903	ENSOGAG00000026193	ZC3HC1	92	72.903	Otolemur_garnettii
ENSSHAG00000002529	ZC3HC1	100	77.682	ENSOARG00000004907	ZC3HC1	91	77.682	Ovis_aries
ENSSHAG00000002529	ZC3HC1	99	78.664	ENSPPAG00000043172	ZC3HC1	94	79.515	Pan_paniscus
ENSSHAG00000002529	ZC3HC1	100	77.204	ENSPPRG00000001004	ZC3HC1	96	76.703	Panthera_pardus
ENSSHAG00000002529	ZC3HC1	100	77.849	ENSPTIG00000007823	ZC3HC1	96	77.363	Panthera_tigris_altaica
ENSSHAG00000002529	ZC3HC1	99	78.448	ENSPTRG00000019685	ZC3HC1	94	79.295	Pan_troglodytes
ENSSHAG00000002529	ZC3HC1	100	77.204	ENSPANG00000014229	ZC3HC1	97	77.802	Papio_anubis
ENSSHAG00000002529	ZC3HC1	93	48.519	ENSPKIG00000007172	zc3hc1	87	48.519	Paramormyrops_kingsleyae
ENSSHAG00000002529	ZC3HC1	99	61.834	ENSPSIG00000016646	ZC3HC1	91	62.419	Pelodiscus_sinensis
ENSSHAG00000002529	ZC3HC1	94	40.969	ENSPMGG00000003548	zc3hc1	95	37.773	Periophthalmus_magnuspinnatus
ENSSHAG00000002529	ZC3HC1	100	75.699	ENSPEMG00000000514	Zc3hc1	92	75.699	Peromyscus_maniculatus_bairdii
ENSSHAG00000002529	ZC3HC1	100	87.312	ENSPCIG00000020619	ZC3HC1	100	92.288	Phascolarctos_cinereus
ENSSHAG00000002529	ZC3HC1	94	43.267	ENSPFOG00000003466	zc3hc1	88	43.267	Poecilia_formosa
ENSSHAG00000002529	ZC3HC1	94	43.046	ENSPLAG00000022211	zc3hc1	88	43.046	Poecilia_latipinna
ENSSHAG00000002529	ZC3HC1	94	43.267	ENSPMEG00000001458	zc3hc1	90	42.389	Poecilia_mexicana
ENSSHAG00000002529	ZC3HC1	94	42.826	ENSPREG00000004004	zc3hc1	88	42.826	Poecilia_reticulata
ENSSHAG00000002529	ZC3HC1	99	71.888	ENSPPYG00000017998	ZC3HC1	92	71.888	Pongo_abelii
ENSSHAG00000002529	ZC3HC1	99	76.139	ENSPCAG00000001182	ZC3HC1	98	76.484	Procavia_capensis
ENSSHAG00000002529	ZC3HC1	100	78.925	ENSPCOG00000017354	ZC3HC1	92	78.925	Propithecus_coquereli
ENSSHAG00000002529	ZC3HC1	100	74.409	ENSPVAG00000003195	ZC3HC1	92	75.699	Pteropus_vampyrus
ENSSHAG00000002529	ZC3HC1	93	43.902	ENSPNYG00000020692	zc3hc1	87	43.902	Pundamilia_nyererei
ENSSHAG00000002529	ZC3HC1	92	45.351	ENSPNAG00000020746	zc3hc1	87	45.351	Pygocentrus_nattereri
ENSSHAG00000002529	ZC3HC1	100	74.839	ENSRNOG00000010154	Zc3hc1	92	74.839	Rattus_norvegicus
ENSSHAG00000002529	ZC3HC1	98	78.901	ENSRBIG00000029409	ZC3HC1	100	79.032	Rhinopithecus_bieti
ENSSHAG00000002529	ZC3HC1	100	78.065	ENSRROG00000041831	ZC3HC1	97	76.986	Rhinopithecus_roxellana
ENSSHAG00000002529	ZC3HC1	86	80.851	ENSSBOG00000032787	ZC3HC1	99	74.146	Saimiri_boliviensis_boliviensis
ENSSHAG00000002529	ZC3HC1	97	49.783	ENSSFOG00015003667	zc3hc1	85	49.783	Scleropages_formosus
ENSSHAG00000002529	ZC3HC1	94	44.000	ENSSMAG00000000647	zc3hc1	79	44.789	Scophthalmus_maximus
ENSSHAG00000002529	ZC3HC1	93	45.982	ENSSDUG00000004241	zc3hc1	85	46.000	Seriola_dumerili
ENSSHAG00000002529	ZC3HC1	93	45.982	ENSSLDG00000025056	zc3hc1	85	46.000	Seriola_lalandi_dorsalis
ENSSHAG00000002529	ZC3HC1	100	70.108	ENSSARG00000012013	ZC3HC1	92	70.108	Sorex_araneus
ENSSHAG00000002529	ZC3HC1	94	58.559	ENSSPUG00000000778	ZC3HC1	86	58.904	Sphenodon_punctatus
ENSSHAG00000002529	ZC3HC1	98	43.368	ENSSPAG00000020041	zc3hc1	87	44.568	Stegastes_partitus
ENSSHAG00000002529	ZC3HC1	100	78.280	ENSSSCG00000016565	ZC3HC1	100	79.177	Sus_scrofa
ENSSHAG00000002529	ZC3HC1	53	58.333	ENSTGUG00000016262	ZC3HC1	100	58.333	Taeniopygia_guttata
ENSSHAG00000002529	ZC3HC1	94	44.346	ENSTRUG00000020077	zc3hc1	88	45.011	Takifugu_rubripes
ENSSHAG00000002529	ZC3HC1	94	43.946	ENSTNIG00000007585	zc3hc1	92	44.196	Tetraodon_nigroviridis
ENSSHAG00000002529	ZC3HC1	99	67.241	ENSTBEG00000005216	ZC3HC1	92	67.241	Tupaia_belangeri
ENSSHAG00000002529	ZC3HC1	100	77.253	ENSTTRG00000008458	ZC3HC1	97	77.253	Tursiops_truncatus
ENSSHAG00000002529	ZC3HC1	100	79.140	ENSUAMG00000020249	ZC3HC1	92	79.140	Ursus_americanus
ENSSHAG00000002529	ZC3HC1	100	78.925	ENSUMAG00000009268	ZC3HC1	92	78.925	Ursus_maritimus
ENSSHAG00000002529	ZC3HC1	76	77.551	ENSVPAG00000010846	ZC3HC1	69	77.551	Vicugna_pacos
ENSSHAG00000002529	ZC3HC1	95	78.054	ENSVVUG00000012386	ZC3HC1	91	78.054	Vulpes_vulpes
ENSSHAG00000002529	ZC3HC1	94	52.727	ENSXETG00000033900	zc3hc1	85	54.676	Xenopus_tropicalis
ENSSHAG00000002529	ZC3HC1	94	42.358	ENSXCOG00000013570	zc3hc1	94	39.456	Xiphophorus_couchianus
ENSSHAG00000002529	ZC3HC1	94	43.326	ENSXMAG00000010979	zc3hc1	95	43.326	Xiphophorus_maculatus