EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002538 (Gene tree)
Gene ID: 100915536
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 23956 bases
Position: chrGL864834.1:34883-58838
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002865	YTH	PF04146.15	1.6e-40	1	1
ENSSHAP00000002866	YTH	PF04146.15	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002899	YTHDC1-202	4604	-	ENSSHAP00000002866	701 (aa)	-	G3VI62
ENSSHAT00000002898	YTHDC1-201	5347	-	ENSSHAP00000002865	632 (aa)	-	G3VI61

Gene Model

Click here to download ENSSHAG00000002538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002538	YTHDC1	91	88.554	ENSG00000083896	YTHDC1	93	88.410	Homo_sapiens
ENSSHAG00000002538	YTHDC1	65	60.482	ENSAPOG00000013997	ythdc1	93	52.656	Acanthochromis_polyacanthus
ENSSHAG00000002538	YTHDC1	91	88.456	ENSAMEG00000005688	YTHDC1	93	87.278	Ailuropoda_melanoleuca
ENSSHAG00000002538	YTHDC1	65	58.753	ENSACIG00000019728	ythdc1	62	59.809	Amphilophus_citrinellus
ENSSHAG00000002538	YTHDC1	65	62.156	ENSAOCG00000000239	ythdc1	94	55.848	Amphiprion_ocellaris
ENSSHAG00000002538	YTHDC1	57	66.391	ENSAPEG00000000618	ythdc1	90	55.825	Amphiprion_percula
ENSSHAG00000002538	YTHDC1	91	89.420	ENSAPLG00000009921	YTHDC1	92	87.616	Anas_platyrhynchos
ENSSHAG00000002538	YTHDC1	91	85.593	ENSACAG00000009697	YTHDC1	93	84.522	Anolis_carolinensis
ENSSHAG00000002538	YTHDC1	91	88.571	ENSANAG00000001522	YTHDC1	93	88.427	Aotus_nancymaae
ENSSHAG00000002538	YTHDC1	92	51.744	ENSACLG00000019371	ythdc1	94	55.947	Astatotilapia_calliptera
ENSSHAG00000002538	YTHDC1	91	67.402	ENSAMXG00000006978	ythdc1	92	67.267	Astyanax_mexicanus
ENSSHAG00000002538	YTHDC1	91	87.519	ENSBTAG00000015572	YTHDC1	93	86.795	Bos_taurus
ENSSHAG00000002538	YTHDC1	91	88.421	ENSCJAG00000009934	YTHDC1	93	88.427	Callithrix_jacchus
ENSSHAG00000002538	YTHDC1	91	88.456	ENSCAFG00000002821	YTHDC1	93	87.278	Canis_familiaris
ENSSHAG00000002538	YTHDC1	91	88.456	ENSCAFG00020027112	YTHDC1	93	87.278	Canis_lupus_dingo
ENSSHAG00000002538	YTHDC1	91	79.259	ENSCHIG00000004810	YTHDC1	95	86.731	Capra_hircus
ENSSHAG00000002538	YTHDC1	91	88.705	ENSTSYG00000011668	YTHDC1	93	88.707	Carlito_syrichta
ENSSHAG00000002538	YTHDC1	90	60.731	ENSCAPG00000008722	YTHDC1	90	59.639	Cavia_aperea
ENSSHAG00000002538	YTHDC1	91	81.175	ENSCPOG00000010929	YTHDC1	92	80.089	Cavia_porcellus
ENSSHAG00000002538	YTHDC1	91	88.688	ENSCCAG00000035754	YTHDC1	93	88.393	Cebus_capucinus
ENSSHAG00000002538	YTHDC1	91	87.519	ENSCATG00000036320	YTHDC1	97	87.692	Cercocebus_atys
ENSSHAG00000002538	YTHDC1	91	87.761	ENSCLAG00000005482	YTHDC1	92	88.060	Chinchilla_lanigera
ENSSHAG00000002538	YTHDC1	91	88.421	ENSCSAG00000005252	YTHDC1	93	88.427	Chlorocebus_sabaeus
ENSSHAG00000002538	YTHDC1	91	89.915	ENSCPBG00000021965	YTHDC1	94	88.076	Chrysemys_picta_bellii
ENSSHAG00000002538	YTHDC1	91	88.571	ENSCANG00000004769	YTHDC1	96	87.500	Colobus_angolensis_palliatus
ENSSHAG00000002538	YTHDC1	91	86.905	ENSCGRG00001000816	Ythdc1	93	86.637	Cricetulus_griseus_chok1gshd
ENSSHAG00000002538	YTHDC1	91	87.748	ENSCGRG00000009807	Ythdc1	93	88.438	Cricetulus_griseus_crigri
ENSSHAG00000002538	YTHDC1	92	52.933	ENSCSEG00000020404	ythdc1	94	55.735	Cynoglossus_semilaevis
ENSSHAG00000002538	YTHDC1	65	59.867	ENSCVAG00000022349	ythdc1	94	55.147	Cyprinodon_variegatus
ENSSHAG00000002538	YTHDC1	92	64.662	ENSDARG00000051953	ythdc1	92	64.145	Danio_rerio
ENSSHAG00000002538	YTHDC1	91	89.833	ENSDNOG00000004949	YTHDC1	93	88.623	Dasypus_novemcinctus
ENSSHAG00000002538	YTHDC1	91	88.253	ENSDORG00000013045	Ythdc1	92	88.554	Dipodomys_ordii
ENSSHAG00000002538	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	75	100.000	Echinops_telfairi
ENSSHAG00000002538	YTHDC1	91	88.756	ENSEASG00005018383	YTHDC1	93	87.574	Equus_asinus_asinus
ENSSHAG00000002538	YTHDC1	91	88.756	ENSECAG00000018303	YTHDC1	99	84.916	Equus_caballus
ENSSHAG00000002538	YTHDC1	91	87.519	ENSEEUG00000015466	YTHDC1	93	86.053	Erinaceus_europaeus
ENSSHAG00000002538	YTHDC1	92	63.150	ENSELUG00000014029	ythdc1	95	64.448	Esox_lucius
ENSSHAG00000002538	YTHDC1	91	88.288	ENSFCAG00000026791	YTHDC1	93	88.148	Felis_catus
ENSSHAG00000002538	YTHDC1	72	87.417	ENSFALG00000006581	YTHDC1	87	97.704	Ficedula_albicollis
ENSSHAG00000002538	YTHDC1	91	88.351	ENSFDAG00000018560	YTHDC1	92	89.561	Fukomys_damarensis
ENSSHAG00000002538	YTHDC1	67	66.038	ENSFHEG00000001286	ythdc1	56	55.357	Fundulus_heteroclitus
ENSSHAG00000002538	YTHDC1	65	65.759	ENSGMOG00000018815	ythdc1	70	77.833	Gadus_morhua
ENSSHAG00000002538	YTHDC1	91	89.420	ENSGALG00000035906	YTHDC1	88	85.010	Gallus_gallus
ENSSHAG00000002538	YTHDC1	65	63.084	ENSGACG00000015486	ythdc1	57	63.084	Gasterosteus_aculeatus
ENSSHAG00000002538	YTHDC1	91	88.196	ENSGAGG00000007108	YTHDC1	91	86.830	Gopherus_agassizii
ENSSHAG00000002538	YTHDC1	91	87.370	ENSGGOG00000021958	YTHDC1	97	87.476	Gorilla_gorilla
ENSSHAG00000002538	YTHDC1	92	51.585	ENSHBUG00000019288	ythdc1	93	55.947	Haplochromis_burtoni
ENSSHAG00000002538	YTHDC1	91	87.575	ENSHGLG00000006319	-	93	87.888	Heterocephalus_glaber_female
ENSSHAG00000002538	YTHDC1	93	73.130	ENSHGLG00000003239	-	86	72.884	Heterocephalus_glaber_female
ENSSHAG00000002538	YTHDC1	93	71.581	ENSHGLG00100008060	-	86	71.295	Heterocephalus_glaber_male
ENSSHAG00000002538	YTHDC1	91	87.651	ENSHGLG00100001556	-	93	87.964	Heterocephalus_glaber_male
ENSSHAG00000002538	YTHDC1	54	71.053	ENSHCOG00000001520	ythdc1	84	59.574	Hippocampus_comes
ENSSHAG00000002538	YTHDC1	91	69.140	ENSIPUG00000018136	ythdc1	92	67.868	Ictalurus_punctatus
ENSSHAG00000002538	YTHDC1	91	87.221	ENSSTOG00000013652	YTHDC1	93	86.364	Ictidomys_tridecemlineatus
ENSSHAG00000002538	YTHDC1	91	85.736	ENSJJAG00000010268	Ythdc1	93	86.937	Jaculus_jaculus
ENSSHAG00000002538	YTHDC1	65	60.959	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSSHAG00000002538	YTHDC1	66	62.233	ENSLBEG00000020831	ythdc1	72	63.636	Labrus_bergylta
ENSSHAG00000002538	YTHDC1	89	77.381	ENSLACG00000004893	YTHDC1	92	74.092	Latimeria_chalumnae
ENSSHAG00000002538	YTHDC1	92	71.429	ENSLOCG00000003045	ythdc1	92	70.015	Lepisosteus_oculatus
ENSSHAG00000002538	YTHDC1	91	88.456	ENSLAFG00000021592	YTHDC1	99	84.682	Loxodonta_africana
ENSSHAG00000002538	YTHDC1	91	87.519	ENSMFAG00000031927	YTHDC1	96	87.500	Macaca_fascicularis
ENSSHAG00000002538	YTHDC1	91	88.571	ENSMMUG00000002265	YTHDC1	93	88.576	Macaca_mulatta
ENSSHAG00000002538	YTHDC1	91	88.571	ENSMNEG00000033751	YTHDC1	96	87.500	Macaca_nemestrina
ENSSHAG00000002538	YTHDC1	91	88.571	ENSMLEG00000042147	YTHDC1	96	87.500	Mandrillus_leucophaeus
ENSSHAG00000002538	YTHDC1	55	66.938	ENSMAMG00000013122	ythdc1	92	55.233	Mastacembelus_armatus
ENSSHAG00000002538	YTHDC1	92	51.744	ENSMZEG00005023173	ythdc1	93	55.947	Maylandia_zebra
ENSSHAG00000002538	YTHDC1	91	88.908	ENSMGAG00000010391	YTHDC1	92	86.280	Meleagris_gallopavo
ENSSHAG00000002538	YTHDC1	91	86.905	ENSMAUG00000001286	Ythdc1	93	86.784	Mesocricetus_auratus
ENSSHAG00000002538	YTHDC1	91	90.332	ENSMICG00000034640	YTHDC1	93	87.482	Microcebus_murinus
ENSSHAG00000002538	YTHDC1	91	87.145	ENSMOCG00000020201	Ythdc1	93	87.649	Microtus_ochrogaster
ENSSHAG00000002538	YTHDC1	87	69.932	ENSMODG00000014337	-	95	71.212	Monodelphis_domestica
ENSSHAG00000002538	YTHDC1	100	99.684	ENSMODG00000020754	-	100	98.573	Monodelphis_domestica
ENSSHAG00000002538	YTHDC1	73	58.405	ENSMODG00000009173	-	87	62.654	Monodelphis_domestica
ENSSHAG00000002538	YTHDC1	95	52.616	ENSMODG00000010076	-	95	52.352	Monodelphis_domestica
ENSSHAG00000002538	YTHDC1	54	60.588	ENSMODG00000004117	-	92	63.141	Monodelphis_domestica
ENSSHAG00000002538	YTHDC1	58	67.467	ENSMALG00000013412	ythdc1	94	56.840	Monopterus_albus
ENSSHAG00000002538	YTHDC1	91	88.430	MGP_CAROLIEiJ_G0027347	Ythdc1	93	86.924	Mus_caroli
ENSSHAG00000002538	YTHDC1	91	88.138	ENSMUSG00000035851	Ythdc1	93	86.499	Mus_musculus
ENSSHAG00000002538	YTHDC1	91	88.284	MGP_PahariEiJ_G0017126	Ythdc1	93	86.499	Mus_pahari
ENSSHAG00000002538	YTHDC1	91	88.449	MGP_SPRETEiJ_G0028339	Ythdc1	93	86.795	Mus_spretus
ENSSHAG00000002538	YTHDC1	91	71.642	ENSMPUG00000001743	YTHDC1	53	98.956	Mustela_putorius_furo
ENSSHAG00000002538	YTHDC1	91	88.788	ENSMLUG00000016300	YTHDC1	92	89.545	Myotis_lucifugus
ENSSHAG00000002538	YTHDC1	60	77.283	ENSNGAG00000024000	Ythdc1	93	79.271	Nannospalax_galili
ENSSHAG00000002538	YTHDC1	65	60.890	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSSHAG00000002538	YTHDC1	91	87.054	ENSNLEG00000009202	YTHDC1	96	86.705	Nomascus_leucogenys
ENSSHAG00000002538	YTHDC1	75	98.851	ENSMEUG00000007128	YTHDC1	68	98.851	Notamacropus_eugenii
ENSSHAG00000002538	YTHDC1	75	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSSHAG00000002538	YTHDC1	91	88.636	ENSODEG00000001715	YTHDC1	93	89.088	Octodon_degus
ENSSHAG00000002538	YTHDC1	92	52.180	ENSONIG00000012651	ythdc1	94	56.241	Oreochromis_niloticus
ENSSHAG00000002538	YTHDC1	91	76.423	ENSOANG00000014398	YTHDC1	55	95.696	Ornithorhynchus_anatinus
ENSSHAG00000002538	YTHDC1	92	77.870	ENSOCUG00000015886	YTHDC1	56	96.212	Oryctolagus_cuniculus
ENSSHAG00000002538	YTHDC1	92	51.825	ENSORLG00000030544	ythdc1	94	56.315	Oryzias_latipes
ENSSHAG00000002538	YTHDC1	91	51.180	ENSORLG00020019316	ythdc1	94	56.528	Oryzias_latipes_hni
ENSSHAG00000002538	YTHDC1	91	53.274	ENSOMEG00000000551	ythdc1	94	55.081	Oryzias_melastigma
ENSSHAG00000002538	YTHDC1	91	88.102	ENSOGAG00000003362	YTHDC1	93	87.964	Otolemur_garnettii
ENSSHAG00000002538	YTHDC1	91	87.519	ENSOARG00000008633	YTHDC1	93	86.795	Ovis_aries
ENSSHAG00000002538	YTHDC1	91	87.500	ENSPPAG00000041315	YTHDC1	97	88.031	Pan_paniscus
ENSSHAG00000002538	YTHDC1	91	87.389	ENSPPRG00000011979	YTHDC1	93	86.823	Panthera_pardus
ENSSHAG00000002538	YTHDC1	91	87.073	ENSPTIG00000015527	YTHDC1	93	87.519	Panthera_tigris_altaica
ENSSHAG00000002538	YTHDC1	91	87.500	ENSPTRG00000016105	YTHDC1	97	88.031	Pan_troglodytes
ENSSHAG00000002538	YTHDC1	91	87.519	ENSPANG00000021590	YTHDC1	96	87.692	Papio_anubis
ENSSHAG00000002538	YTHDC1	91	70.805	ENSPKIG00000018497	ythdc1	93	70.615	Paramormyrops_kingsleyae
ENSSHAG00000002538	YTHDC1	91	89.231	ENSPSIG00000002782	YTHDC1	92	88.080	Pelodiscus_sinensis
ENSSHAG00000002538	YTHDC1	91	87.934	ENSPEMG00000013850	Ythdc1	92	88.688	Peromyscus_maniculatus_bairdii
ENSSHAG00000002538	YTHDC1	100	99.209	ENSPCIG00000006870	YTHDC1	100	98.146	Phascolarctos_cinereus
ENSSHAG00000002538	YTHDC1	65	60.227	ENSPFOG00000013404	ythdc1	94	55.621	Poecilia_formosa
ENSSHAG00000002538	YTHDC1	65	60.000	ENSPLAG00000011079	ythdc1	85	64.531	Poecilia_latipinna
ENSSHAG00000002538	YTHDC1	65	60.000	ENSPMEG00000009238	ythdc1	94	55.621	Poecilia_mexicana
ENSSHAG00000002538	YTHDC1	65	60.432	ENSPREG00000016973	ythdc1	93	51.442	Poecilia_reticulata
ENSSHAG00000002538	YTHDC1	87	88.581	ENSPPYG00000014726	YTHDC1	91	89.619	Pongo_abelii
ENSSHAG00000002538	YTHDC1	75	89.545	ENSPCAG00000009607	YTHDC1	77	89.091	Procavia_capensis
ENSSHAG00000002538	YTHDC1	91	84.328	ENSPCOG00000019105	YTHDC1	92	82.622	Propithecus_coquereli
ENSSHAG00000002538	YTHDC1	91	83.234	ENSPVAG00000015551	YTHDC1	93	85.672	Pteropus_vampyrus
ENSSHAG00000002538	YTHDC1	92	51.744	ENSPNYG00000011687	ythdc1	94	55.947	Pundamilia_nyererei
ENSSHAG00000002538	YTHDC1	91	71.380	ENSPNAG00000028365	ythdc1	93	70.105	Pygocentrus_nattereri
ENSSHAG00000002538	YTHDC1	66	96.956	ENSRNOG00000001996	Ythdc1	93	85.673	Rattus_norvegicus
ENSSHAG00000002538	YTHDC1	91	86.623	ENSRBIG00000028279	YTHDC1	96	85.962	Rhinopithecus_bieti
ENSSHAG00000002538	YTHDC1	91	88.571	ENSRROG00000035028	YTHDC1	96	87.500	Rhinopithecus_roxellana
ENSSHAG00000002538	YTHDC1	91	87.370	ENSSBOG00000022353	YTHDC1	96	87.308	Saimiri_boliviensis_boliviensis
ENSSHAG00000002538	YTHDC1	91	72.681	ENSSFOG00015003298	ythdc1	93	70.091	Scleropages_formosus
ENSSHAG00000002538	YTHDC1	65	60.762	ENSSMAG00000009086	ythdc1	94	55.800	Scophthalmus_maximus
ENSSHAG00000002538	YTHDC1	55	67.391	ENSSDUG00000022008	ythdc1	94	56.769	Seriola_dumerili
ENSSHAG00000002538	YTHDC1	55	67.391	ENSSLDG00000007926	ythdc1	94	56.769	Seriola_lalandi_dorsalis
ENSSHAG00000002538	YTHDC1	79	90.249	ENSSARG00000010960	YTHDC1	91	90.822	Sorex_araneus
ENSSHAG00000002538	YTHDC1	91	88.795	ENSSPUG00000009357	YTHDC1	94	84.929	Sphenodon_punctatus
ENSSHAG00000002538	YTHDC1	65	62.844	ENSSPAG00000011449	ythdc1	94	56.477	Stegastes_partitus
ENSSHAG00000002538	YTHDC1	91	84.441	ENSSSCG00000035505	YTHDC1	93	86.443	Sus_scrofa
ENSSHAG00000002538	YTHDC1	91	89.078	ENSTGUG00000004452	-	92	86.280	Taeniopygia_guttata
ENSSHAG00000002538	YTHDC1	68	56.319	ENSTRUG00000010142	ythdc1	73	60.460	Takifugu_rubripes
ENSSHAG00000002538	YTHDC1	92	50.817	ENSTNIG00000013243	ythdc1	91	53.243	Tetraodon_nigroviridis
ENSSHAG00000002538	YTHDC1	91	82.323	ENSTBEG00000011546	YTHDC1	91	83.846	Tupaia_belangeri
ENSSHAG00000002538	YTHDC1	91	87.106	ENSTTRG00000005083	YTHDC1	93	85.947	Tursiops_truncatus
ENSSHAG00000002538	YTHDC1	91	88.284	ENSUAMG00000010388	YTHDC1	92	88.462	Ursus_americanus
ENSSHAG00000002538	YTHDC1	100	83.096	ENSUMAG00000013668	YTHDC1	98	83.597	Ursus_maritimus
ENSSHAG00000002538	YTHDC1	91	86.103	ENSVPAG00000009040	YTHDC1	92	84.948	Vicugna_pacos
ENSSHAG00000002538	YTHDC1	91	88.138	ENSVVUG00000005387	YTHDC1	92	87.680	Vulpes_vulpes
ENSSHAG00000002538	YTHDC1	91	77.029	ENSXETG00000017960	ythdc1	91	75.269	Xenopus_tropicalis
ENSSHAG00000002538	YTHDC1	92	51.320	ENSXMAG00000005196	ythdc1	94	53.914	Xiphophorus_maculatus