EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002599 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 46662 bases
Position: chrGL834644.1:36634-83295
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000002936	TUDOR	PF00567.24	9.6e-26	1	2
ENSSHAP00000002936	TUDOR	PF00567.24	9.6e-26	2	2
ENSSHAP00000002936	DEAD	PF00270.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000002969	-	3339	-	ENSSHAP00000002936	1113 (aa)	-	G3VID2

Gene Model

Click here to download ENSSHAG00000002599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002599	-	83	43.526	ENSAPOG00000006421	tdrd12	90	43.526	Acanthochromis_polyacanthus
ENSSHAG00000002599	-	72	72.444	ENSAMEG00000015440	-	98	72.444	Ailuropoda_melanoleuca
ENSSHAG00000002599	-	84	43.662	ENSACIG00000021652	tdrd12	92	43.662	Amphilophus_citrinellus
ENSSHAG00000002599	-	78	46.196	ENSAOCG00000016463	tdrd12	74	46.196	Amphiprion_ocellaris
ENSSHAG00000002599	-	80	44.175	ENSAPEG00000015105	tdrd12	86	44.175	Amphiprion_percula
ENSSHAG00000002599	-	85	42.779	ENSATEG00000011608	tdrd12	94	42.779	Anabas_testudineus
ENSSHAG00000002599	-	98	57.066	ENSAPLG00000011417	-	94	64.035	Anas_platyrhynchos
ENSSHAG00000002599	-	65	57.517	ENSACAG00000029615	-	75	57.517	Anolis_carolinensis
ENSSHAG00000002599	-	99	68.435	ENSANAG00000023166	-	94	68.435	Aotus_nancymaae
ENSSHAG00000002599	-	80	47.515	ENSAMXG00000013811	tdrd12	88	47.515	Astyanax_mexicanus
ENSSHAG00000002599	-	99	68.615	ENSCJAG00000000763	-	93	68.615	Callithrix_jacchus
ENSSHAG00000002599	-	99	70.912	ENSCAFG00000007505	TDRD12	82	71.963	Canis_familiaris
ENSSHAG00000002599	-	99	70.950	ENSCAFG00020019790	-	92	70.493	Canis_lupus_dingo
ENSSHAG00000002599	-	99	70.045	ENSTSYG00000012034	-	94	70.045	Carlito_syrichta
ENSSHAG00000002599	-	92	68.196	ENSCPOG00000002876	-	98	60.870	Cavia_porcellus
ENSSHAG00000002599	-	99	65.530	ENSCCAG00000037592	-	93	65.530	Cebus_capucinus
ENSSHAG00000002599	-	99	64.446	ENSCATG00000038627	-	94	64.446	Cercocebus_atys
ENSSHAG00000002599	-	99	68.345	ENSCLAG00000012138	-	85	68.345	Chinchilla_lanigera
ENSSHAG00000002599	-	99	69.694	ENSCSAG00000004794	-	93	69.694	Chlorocebus_sabaeus
ENSSHAG00000002599	-	51	92.233	ENSCHOG00000009768	-	54	92.233	Choloepus_hoffmanni
ENSSHAG00000002599	-	88	71.984	ENSCPBG00000000147	-	93	71.984	Chrysemys_picta_bellii
ENSSHAG00000002599	-	99	66.876	ENSCANG00000040785	-	98	62.563	Colobus_angolensis_palliatus
ENSSHAG00000002599	-	92	69.605	ENSCGRG00001021407	-	99	63.004	Cricetulus_griseus_chok1gshd
ENSSHAG00000002599	-	91	69.301	ENSCGRG00000007286	-	83	69.301	Cricetulus_griseus_crigri
ENSSHAG00000002599	-	84	40.758	ENSCSEG00000001744	-	74	40.758	Cynoglossus_semilaevis
ENSSHAG00000002599	-	62	41.630	ENSCVAG00000004277	tdrd12	91	41.630	Cyprinodon_variegatus
ENSSHAG00000002599	-	99	40.973	ENSDARG00000075217	tdrd12	81	40.973	Danio_rerio
ENSSHAG00000002599	-	99	71.185	ENSDNOG00000017244	-	84	71.185	Dasypus_novemcinctus
ENSSHAG00000002599	-	92	65.957	ENSDORG00000012134	-	98	56.806	Dipodomys_ordii
ENSSHAG00000002599	-	65	73.103	ENSETEG00000015088	-	80	73.103	Echinops_telfairi
ENSSHAG00000002599	-	99	67.806	ENSEASG00005021053	-	82	69.605	Equus_asinus_asinus
ENSSHAG00000002599	-	91	79.798	ENSEEUG00000008457	-	92	79.798	Erinaceus_europaeus
ENSSHAG00000002599	-	86	46.803	ENSELUG00000017494	tdrd12	76	45.946	Esox_lucius
ENSSHAG00000002599	-	83	53.250	ENSFALG00000000259	-	74	53.250	Ficedula_albicollis
ENSSHAG00000002599	-	92	67.771	ENSFDAG00000014797	-	99	58.744	Fukomys_damarensis
ENSSHAG00000002599	-	70	36.168	ENSFHEG00000002884	-	71	36.168	Fundulus_heteroclitus
ENSSHAG00000002599	-	86	57.778	ENSGALG00000004704	-	80	57.778	Gallus_gallus
ENSSHAG00000002599	-	99	43.639	ENSGAFG00000003729	tdrd12	79	43.639	Gambusia_affinis
ENSSHAG00000002599	-	86	72.763	ENSGAGG00000000247	-	91	72.763	Gopherus_agassizii
ENSSHAG00000002599	-	99	69.749	ENSGGOG00000011938	-	93	69.749	Gorilla_gorilla
ENSSHAG00000002599	-	80	44.135	ENSHBUG00000020426	tdrd12	89	44.135	Haplochromis_burtoni
ENSSHAG00000002599	-	91	69.969	ENSHGLG00000015608	-	99	61.712	Heterocephalus_glaber_female
ENSSHAG00000002599	-	98	68.007	ENSHGLG00100008227	-	99	68.007	Heterocephalus_glaber_male
ENSSHAG00000002599	-	98	39.600	ENSIPUG00000016825	tdrd12	81	39.600	Ictalurus_punctatus
ENSSHAG00000002599	-	91	74.295	ENSSTOG00000013638	-	97	65.217	Ictidomys_tridecemlineatus
ENSSHAG00000002599	-	65	44.545	ENSKMAG00000008031	tdrd12	84	44.545	Kryptolebias_marmoratus
ENSSHAG00000002599	-	80	42.718	ENSLBEG00000005601	tdrd12	87	42.718	Labrus_bergylta
ENSSHAG00000002599	-	87	56.671	ENSLACG00000010650	-	99	51.075	Latimeria_chalumnae
ENSSHAG00000002599	-	87	47.251	ENSLOCG00000001690	tdrd12	71	47.251	Lepisosteus_oculatus
ENSSHAG00000002599	-	99	70.324	ENSLAFG00000008698	-	99	70.324	Loxodonta_africana
ENSSHAG00000002599	-	99	69.659	ENSMFAG00000044756	-	93	69.659	Macaca_fascicularis
ENSSHAG00000002599	-	99	69.730	ENSMMUG00000015608	-	93	69.569	Macaca_mulatta
ENSSHAG00000002599	-	99	69.793	ENSMNEG00000043067	-	94	69.793	Macaca_nemestrina
ENSSHAG00000002599	-	98	69.792	ENSMLEG00000042036	-	98	69.792	Mandrillus_leucophaeus
ENSSHAG00000002599	-	84	41.644	ENSMAMG00000013867	tdrd12	88	41.644	Mastacembelus_armatus
ENSSHAG00000002599	-	81	43.741	ENSMZEG00005024214	tdrd12	90	43.741	Maylandia_zebra
ENSSHAG00000002599	-	62	61.127	ENSMGAG00000005627	-	100	61.127	Meleagris_gallopavo
ENSSHAG00000002599	-	91	67.702	ENSMAUG00000013767	-	83	67.702	Mesocricetus_auratus
ENSSHAG00000002599	-	99	69.694	ENSMICG00000003623	-	96	69.694	Microcebus_murinus
ENSSHAG00000002599	-	99	67.149	ENSMOCG00000002366	-	99	67.149	Microtus_ochrogaster
ENSSHAG00000002599	-	83	42.647	ENSMMOG00000018662	tdrd12	91	42.647	Mola_mola
ENSSHAG00000002599	-	96	89.851	ENSMODG00000012286	-	80	89.851	Monodelphis_domestica
ENSSHAG00000002599	-	84	41.315	ENSMALG00000006918	tdrd12	80	41.315	Monopterus_albus
ENSSHAG00000002599	-	99	68.284	MGP_CAROLIEiJ_G0029587	-	97	76.263	Mus_caroli
ENSSHAG00000002599	-	99	68.312	MGP_PahariEiJ_G0012821	-	97	76.263	Mus_pahari
ENSSHAG00000002599	-	99	67.896	MGP_SPRETEiJ_G0030686	-	97	77.157	Mus_spretus
ENSSHAG00000002599	-	99	70.546	ENSMPUG00000007791	-	85	70.546	Mustela_putorius_furo
ENSSHAG00000002599	-	92	71.429	ENSMLUG00000010694	-	99	71.429	Myotis_lucifugus
ENSSHAG00000002599	-	91	70.948	ENSNGAG00000000793	-	97	60.825	Nannospalax_galili
ENSSHAG00000002599	-	60	42.643	ENSNBRG00000017878	-	93	42.643	Neolamprologus_brichardi
ENSSHAG00000002599	-	99	65.495	ENSNLEG00000007635	-	93	65.495	Nomascus_leucogenys
ENSSHAG00000002599	-	63	96.203	ENSMEUG00000014059	-	64	96.203	Notamacropus_eugenii
ENSSHAG00000002599	-	80	76.826	ENSOPRG00000015809	-	80	76.826	Ochotona_princeps
ENSSHAG00000002599	-	91	66.770	ENSODEG00000014443	-	96	60.743	Octodon_degus
ENSSHAG00000002599	-	85	43.333	ENSONIG00000010630	tdrd12	99	38.023	Oreochromis_niloticus
ENSSHAG00000002599	-	53	65.657	ENSOANG00000029442	-	98	65.657	Ornithorhynchus_anatinus
ENSSHAG00000002599	-	92	67.169	ENSOCUG00000016911	-	83	67.169	Oryctolagus_cuniculus
ENSSHAG00000002599	-	79	41.679	ENSORLG00000027859	tdrd12	74	41.679	Oryzias_latipes
ENSSHAG00000002599	-	83	44.390	ENSORLG00015020835	tdrd12	66	44.390	Oryzias_latipes_hsok
ENSSHAG00000002599	-	84	40.976	ENSOMEG00000021862	tdrd12	90	40.976	Oryzias_melastigma
ENSSHAG00000002599	-	99	70.098	ENSOGAG00000001571	-	99	70.098	Otolemur_garnettii
ENSSHAG00000002599	-	99	71.300	ENSOARG00000004254	-	84	70.377	Ovis_aries
ENSSHAG00000002599	-	99	67.475	ENSPPAG00000042284	-	94	67.475	Pan_paniscus
ENSSHAG00000002599	-	99	70.370	ENSPPRG00000002389	-	95	70.370	Panthera_pardus
ENSSHAG00000002599	-	99	67.116	ENSPTRG00000010795	TDRD12	94	67.116	Pan_troglodytes
ENSSHAG00000002599	-	99	69.749	ENSPANG00000001203	-	93	69.749	Papio_anubis
ENSSHAG00000002599	-	90	45.133	ENSPKIG00000006407	tdrd12	70	45.133	Paramormyrops_kingsleyae
ENSSHAG00000002599	-	93	65.361	ENSPSIG00000012970	-	100	70.443	Pelodiscus_sinensis
ENSSHAG00000002599	-	79	42.984	ENSPMGG00000022691	tdrd12	89	42.984	Periophthalmus_magnuspinnatus
ENSSHAG00000002599	-	99	69.811	ENSPEMG00000009233	-	97	69.811	Peromyscus_maniculatus_bairdii
ENSSHAG00000002599	-	99	88.188	ENSPCIG00000020993	-	84	88.188	Phascolarctos_cinereus
ENSSHAG00000002599	-	84	42.588	ENSPFOG00000008184	tdrd12	68	42.588	Poecilia_formosa
ENSSHAG00000002599	-	64	42.436	ENSPMEG00000006420	tdrd12	92	42.436	Poecilia_mexicana
ENSSHAG00000002599	-	90	43.089	ENSPREG00000004916	tdrd12	89	43.089	Poecilia_reticulata
ENSSHAG00000002599	-	99	69.479	ENSPPYG00000009821	-	92	69.479	Pongo_abelii
ENSSHAG00000002599	-	85	59.961	ENSPCAG00000013510	-	86	59.961	Procavia_capensis
ENSSHAG00000002599	-	99	65.827	ENSPCOG00000023600	-	99	61.000	Propithecus_coquereli
ENSSHAG00000002599	-	92	84.896	ENSPVAG00000014599	-	92	84.896	Pteropus_vampyrus
ENSSHAG00000002599	-	80	43.842	ENSPNYG00000022866	tdrd12	87	43.842	Pundamilia_nyererei
ENSSHAG00000002599	-	81	46.187	ENSPNAG00000003413	tdrd12	86	46.187	Pygocentrus_nattereri
ENSSHAG00000002599	-	99	69.031	ENSRNOG00000012719	Tdrd12	84	69.031	Rattus_norvegicus
ENSSHAG00000002599	-	99	64.100	ENSRBIG00000019899	-	93	64.100	Rhinopithecus_bieti
ENSSHAG00000002599	-	99	69.569	ENSRROG00000036351	-	93	69.569	Rhinopithecus_roxellana
ENSSHAG00000002599	-	99	68.761	ENSSBOG00000034916	-	93	68.761	Saimiri_boliviensis_boliviensis
ENSSHAG00000002599	-	78	45.673	ENSSFOG00015000297	tdrd12	80	45.673	Scleropages_formosus
ENSSHAG00000002599	-	99	37.703	ENSSMAG00000002870	tdrd12	99	37.703	Scophthalmus_maximus
ENSSHAG00000002599	-	80	44.737	ENSSDUG00000017304	tdrd12	88	44.737	Seriola_dumerili
ENSSHAG00000002599	-	80	44.298	ENSSLDG00000004415	tdrd12	87	44.298	Seriola_lalandi_dorsalis
ENSSHAG00000002599	-	98	67.093	ENSSARG00000005357	-	99	67.093	Sorex_araneus
ENSSHAG00000002599	-	88	64.722	ENSSPUG00000013174	-	91	64.722	Sphenodon_punctatus
ENSSHAG00000002599	-	66	58.696	ENSSPAG00000005706	tdrd12	76	58.696	Stegastes_partitus
ENSSHAG00000002599	-	85	68.526	ENSSSCG00000002857	-	93	68.586	Sus_scrofa
ENSSHAG00000002599	-	59	54.834	ENSTGUG00000009121	-	100	55.212	Taeniopygia_guttata
ENSSHAG00000002599	-	81	39.227	ENSTRUG00000021888	tdrd12	91	39.227	Takifugu_rubripes
ENSSHAG00000002599	-	75	75.828	ENSTBEG00000007609	-	76	75.828	Tupaia_belangeri
ENSSHAG00000002599	-	99	68.829	ENSTTRG00000012206	-	99	68.829	Tursiops_truncatus
ENSSHAG00000002599	-	99	68.835	ENSUAMG00000007298	-	94	68.548	Ursus_americanus
ENSSHAG00000002599	-	99	68.835	ENSUMAG00000014314	-	94	68.548	Ursus_maritimus
ENSSHAG00000002599	-	94	63.308	ENSVPAG00000012051	-	100	63.308	Vicugna_pacos
ENSSHAG00000002599	-	99	71.442	ENSVVUG00000016637	-	87	71.442	Vulpes_vulpes
ENSSHAG00000002599	-	59	47.399	ENSXETG00000031945	-	76	47.399	Xenopus_tropicalis
ENSSHAG00000002599	-	87	43.526	ENSXMAG00000020908	tdrd12	98	43.526	Xiphophorus_maculatus