EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000002702 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2064 bases
Position: chrGL834848.1:39175-41238
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003050	RRM_1	PF00076.22	5.7e-53	1	4
ENSSHAP00000003050	RRM_1	PF00076.22	5.7e-53	2	4
ENSSHAP00000003050	RRM_1	PF00076.22	5.7e-53	3	4
ENSSHAP00000003050	RRM_1	PF00076.22	5.7e-53	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003086	-	1884	-	ENSSHAP00000003050	627 (aa)	-	G3VIP6

Gene Model

Click here to download ENSSHAG00000002702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000002702	-	62	86.873	ENSSHAG00000007489	-	50	86.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002702	-	59	53.806	ENSAPOG00000023888	ncl	52	53.826	Acanthochromis_polyacanthus
ENSSHAG00000002702	-	65	36.574	ENSAPOG00000014534	-	66	37.435	Acanthochromis_polyacanthus
ENSSHAG00000002702	-	60	52.344	ENSACIG00000013234	ncl	61	52.800	Amphilophus_citrinellus
ENSSHAG00000002702	-	59	54.450	ENSAOCG00000003133	ncl	57	51.683	Amphiprion_ocellaris
ENSSHAG00000002702	-	63	36.603	ENSAOCG00000014792	-	60	37.500	Amphiprion_ocellaris
ENSSHAG00000002702	-	59	54.450	ENSAPEG00000002769	ncl	57	51.683	Amphiprion_percula
ENSSHAG00000002702	-	63	36.842	ENSAPEG00000013612	-	60	37.760	Amphiprion_percula
ENSSHAG00000002702	-	59	53.281	ENSATEG00000013343	ncl	53	52.910	Anabas_testudineus
ENSSHAG00000002702	-	66	37.086	ENSATEG00000019862	-	80	37.500	Anabas_testudineus
ENSSHAG00000002702	-	59	61.856	ENSAPLG00000012897	-	63	61.917	Anas_platyrhynchos
ENSSHAG00000002702	-	89	53.512	ENSACAG00000001006	-	52	60.367	Anolis_carolinensis
ENSSHAG00000002702	-	57	50.720	ENSACLG00000026031	ncl	85	53.922	Astatotilapia_calliptera
ENSSHAG00000002702	-	62	51.238	ENSAMXG00000001647	ncl	86	53.870	Astyanax_mexicanus
ENSSHAG00000002702	-	71	60.171	ENSCPBG00000016444	-	60	61.687	Chrysemys_picta_bellii
ENSSHAG00000002702	-	59	53.125	ENSCVAG00000012600	ncl	54	52.604	Cyprinodon_variegatus
ENSSHAG00000002702	-	59	55.497	ENSDARG00000002710	ncl	82	56.731	Danio_rerio
ENSSHAG00000002702	-	59	57.527	ENSDNOG00000031611	-	67	57.527	Dasypus_novemcinctus
ENSSHAG00000002702	-	57	56.787	ENSDNOG00000040257	-	60	56.901	Dasypus_novemcinctus
ENSSHAG00000002702	-	61	43.367	ENSEBUG00000016173	ncl	63	43.316	Eptatretus_burgeri
ENSSHAG00000002702	-	77	42.417	ENSELUG00000022826	-	81	43.717	Esox_lucius
ENSSHAG00000002702	-	59	52.073	ENSELUG00000006033	ncl	55	52.255	Esox_lucius
ENSSHAG00000002702	-	62	57.426	ENSFALG00000007592	-	57	57.214	Ficedula_albicollis
ENSSHAG00000002702	-	59	51.295	ENSFHEG00000018000	ncl	60	51.714	Fundulus_heteroclitus
ENSSHAG00000002702	-	59	50.933	ENSGMOG00000001341	ncl	59	50.938	Gadus_morhua
ENSSHAG00000002702	-	59	61.340	ENSGALG00000032930	NCL	55	61.399	Gallus_gallus
ENSSHAG00000002702	-	69	61.062	ENSGAGG00000013330	-	61	60.621	Gopherus_agassizii
ENSSHAG00000002702	-	62	50.363	ENSHBUG00000006869	ncl	52	52.957	Haplochromis_burtoni
ENSSHAG00000002702	-	59	53.665	ENSHCOG00000010234	ncl	51	53.846	Hippocampus_comes
ENSSHAG00000002702	-	54	54.286	ENSIPUG00000024556	ncl	80	54.984	Ictalurus_punctatus
ENSSHAG00000002702	-	59	53.421	ENSKMAG00000008111	ncl	53	53.704	Kryptolebias_marmoratus
ENSSHAG00000002702	-	56	36.658	ENSLBEG00000014278	-	80	37.288	Labrus_bergylta
ENSSHAG00000002702	-	73	47.992	ENSLBEG00000019073	ncl	55	52.000	Labrus_bergylta
ENSSHAG00000002702	-	61	36.935	ENSLBEG00000007915	-	65	37.533	Labrus_bergylta
ENSSHAG00000002702	-	78	44.976	ENSLACG00000022167	-	79	46.457	Latimeria_chalumnae
ENSSHAG00000002702	-	60	57.106	ENSLACG00000009328	ncl	56	57.480	Latimeria_chalumnae
ENSSHAG00000002702	-	54	53.409	ENSLOCG00000004828	ncl	50	52.480	Lepisosteus_oculatus
ENSSHAG00000002702	-	65	34.873	ENSMAMG00000003479	-	69	35.156	Mastacembelus_armatus
ENSSHAG00000002702	-	58	54.762	ENSMAMG00000002086	ncl	50	52.392	Mastacembelus_armatus
ENSSHAG00000002702	-	58	60.638	ENSMGAG00000008147	-	92	58.809	Meleagris_gallopavo
ENSSHAG00000002702	-	54	55.949	ENSMMOG00000008553	ncl	85	55.806	Mola_mola
ENSSHAG00000002702	-	96	74.068	ENSMODG00000002470	-	54	85.079	Monodelphis_domestica
ENSSHAG00000002702	-	57	31.399	ENSMALG00000014827	ncl	55	55.432	Monopterus_albus
ENSSHAG00000002702	-	58	53.939	ENSMPUG00000001663	-	78	55.591	Mustela_putorius_furo
ENSSHAG00000002702	-	57	51.703	ENSNBRG00000001232	ncl	82	55.319	Neolamprologus_brichardi
ENSSHAG00000002702	-	57	51.703	ENSNBRG00000000146	-	86	55.319	Neolamprologus_brichardi
ENSSHAG00000002702	-	95	70.846	ENSMEUG00000012335	-	55	85.676	Notamacropus_eugenii
ENSSHAG00000002702	-	62	50.363	ENSONIG00000012508	ncl	52	52.957	Oreochromis_niloticus
ENSSHAG00000002702	-	59	68.421	ENSOANG00000008732	-	61	69.211	Ornithorhynchus_anatinus
ENSSHAG00000002702	-	62	30.529	ENSORLG00000004645	-	78	33.799	Oryzias_latipes
ENSSHAG00000002702	-	56	55.191	ENSORLG00000007055	ncl	51	54.308	Oryzias_latipes
ENSSHAG00000002702	-	59	54.167	ENSORLG00020017943	ncl	51	54.308	Oryzias_latipes_hni
ENSSHAG00000002702	-	68	30.512	ENSORLG00020003497	-	70	33.799	Oryzias_latipes_hni
ENSSHAG00000002702	-	59	52.742	ENSORLG00015013815	ncl	89	56.090	Oryzias_latipes_hsok
ENSSHAG00000002702	-	70	30.303	ENSORLG00015006613	-	72	33.799	Oryzias_latipes_hsok
ENSSHAG00000002702	-	61	32.061	ENSOMEG00000015864	-	82	31.675	Oryzias_melastigma
ENSSHAG00000002702	-	71	50.980	ENSPKIG00000002604	ncl	56	50.980	Paramormyrops_kingsleyae
ENSSHAG00000002702	-	59	54.642	ENSPMGG00000004709	ncl	89	53.582	Periophthalmus_magnuspinnatus
ENSSHAG00000002702	-	72	50.108	ENSPNAG00000006192	ncl	55	51.478	Pygocentrus_nattereri
ENSSHAG00000002702	-	51	38.393	ENSSFOG00015013153	-	77	38.924	Scleropages_formosus
ENSSHAG00000002702	-	59	55.906	ENSSFOG00015008583	ncl	57	55.937	Scleropages_formosus
ENSSHAG00000002702	-	59	53.281	ENSSMAG00000021241	ncl	53	53.525	Scophthalmus_maximus
ENSSHAG00000002702	-	60	53.608	ENSSDUG00000006128	ncl	84	53.298	Seriola_dumerili
ENSSHAG00000002702	-	65	36.881	ENSSDUG00000010922	-	82	36.923	Seriola_dumerili
ENSSHAG00000002702	-	65	37.349	ENSSLDG00000015784	-	82	36.598	Seriola_lalandi_dorsalis
ENSSHAG00000002702	-	59	52.756	ENSSLDG00000002012	ncl	52	53.175	Seriola_lalandi_dorsalis
ENSSHAG00000002702	-	70	69.091	ENSSARG00000010007	-	61	69.091	Sorex_araneus
ENSSHAG00000002702	-	96	54.186	ENSSPUG00000008244	-	60	60.652	Sphenodon_punctatus
ENSSHAG00000002702	-	63	37.890	ENSSPAG00000001859	-	61	38.120	Stegastes_partitus
ENSSHAG00000002702	-	56	55.208	ENSSPAG00000002637	ncl	82	55.245	Stegastes_partitus
ENSSHAG00000002702	-	59	59.008	ENSTGUG00000009782	-	60	59.055	Taeniopygia_guttata
ENSSHAG00000002702	-	57	54.076	ENSTRUG00000008185	ncl	54	53.298	Takifugu_rubripes
ENSSHAG00000002702	-	56	54.496	ENSTNIG00000012186	ncl	62	53.525	Tetraodon_nigroviridis
ENSSHAG00000002702	-	54	34.582	ENSXCOG00000007369	-	89	34.203	Xiphophorus_couchianus
ENSSHAG00000002702	-	60	45.103	ENSXCOG00000003524	ncl	87	44.586	Xiphophorus_couchianus