EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000002716 (Gene tree)
Gene ID: 100930212
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 5632 bases
Position: chrGL864934.1:39519-45150
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003065	Ribosomal_L23	PF00276.20	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003101	-	662	-	ENSSHAP00000003065	147 (aa)	-	G3VIR1

Gene Model

Click here to download ENSSHAG00000002716's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002716	-	100	76.190	ENSG00000214026	MRPL23	96	76.190	Homo_sapiens
ENSSHAG00000002716	-	100	70.068	ENSAPOG00000013198	mrpl23	95	70.068	Acanthochromis_polyacanthus
ENSSHAG00000002716	-	100	78.378	ENSAMEG00000002153	-	96	78.378	Ailuropoda_melanoleuca
ENSSHAG00000002716	-	100	71.429	ENSACIG00000024327	mrpl23	96	71.429	Amphilophus_citrinellus
ENSSHAG00000002716	-	100	70.068	ENSAOCG00000013679	mrpl23	95	70.068	Amphiprion_ocellaris
ENSSHAG00000002716	-	100	70.068	ENSAPEG00000010298	mrpl23	95	70.068	Amphiprion_percula
ENSSHAG00000002716	-	100	69.388	ENSATEG00000019314	mrpl23	96	69.388	Anabas_testudineus
ENSSHAG00000002716	-	78	62.609	ENSAPLG00000012955	-	100	62.609	Anas_platyrhynchos
ENSSHAG00000002716	-	64	76.596	ENSACAG00000009700	-	99	76.596	Anolis_carolinensis
ENSSHAG00000002716	-	100	78.912	ENSANAG00000010507	-	97	78.912	Aotus_nancymaae
ENSSHAG00000002716	-	100	71.429	ENSACLG00000002565	mrpl23	95	71.429	Astatotilapia_calliptera
ENSSHAG00000002716	-	64	68.085	ENSAMXG00000016759	mrpl23	94	48.039	Astyanax_mexicanus
ENSSHAG00000002716	-	85	60.800	ENSBTAG00000000103	MRPL23	100	68.868	Bos_taurus
ENSSHAG00000002716	-	94	36.735	WBGene00020348	mrpl-23	92	36.735	Caenorhabditis_elegans
ENSSHAG00000002716	-	100	78.231	ENSCAFG00000010086	-	96	78.231	Canis_familiaris
ENSSHAG00000002716	-	100	78.231	ENSCAFG00020017439	-	96	78.231	Canis_lupus_dingo
ENSSHAG00000002716	-	100	76.871	ENSCHIG00000019224	-	96	76.871	Capra_hircus
ENSSHAG00000002716	-	100	77.551	ENSTSYG00000030664	-	97	77.551	Carlito_syrichta
ENSSHAG00000002716	-	100	63.265	ENSCAPG00000012400	-	100	63.265	Cavia_aperea
ENSSHAG00000002716	-	100	76.871	ENSCPOG00000035162	-	96	76.871	Cavia_porcellus
ENSSHAG00000002716	-	100	78.231	ENSCCAG00000021662	-	96	78.231	Cebus_capucinus
ENSSHAG00000002716	-	97	74.126	ENSCATG00000019817	-	88	74.126	Cercocebus_atys
ENSSHAG00000002716	-	100	78.912	ENSCATG00000037780	-	95	78.912	Cercocebus_atys
ENSSHAG00000002716	-	100	77.551	ENSCLAG00000015446	-	96	77.551	Chinchilla_lanigera
ENSSHAG00000002716	-	100	77.551	ENSCSAG00000009837	-	96	77.551	Chlorocebus_sabaeus
ENSSHAG00000002716	-	100	76.351	ENSCSAG00000019043	-	96	76.351	Chlorocebus_sabaeus
ENSSHAG00000002716	-	100	71.429	ENSCPBG00000007389	-	95	71.429	Chrysemys_picta_bellii
ENSSHAG00000002716	-	71	33.333	ENSCING00000002791	-	77	31.387	Ciona_intestinalis
ENSSHAG00000002716	-	100	76.871	ENSCANG00000032318	-	100	76.871	Colobus_angolensis_palliatus
ENSSHAG00000002716	-	100	74.150	ENSCGRG00001000462	Mrpl23	96	74.150	Cricetulus_griseus_chok1gshd
ENSSHAG00000002716	-	100	74.150	ENSCGRG00000002207	Mrpl23	96	74.150	Cricetulus_griseus_crigri
ENSSHAG00000002716	-	100	65.306	ENSCSEG00000008738	mrpl23	99	65.306	Cynoglossus_semilaevis
ENSSHAG00000002716	-	100	69.388	ENSCVAG00000002822	mrpl23	95	69.388	Cyprinodon_variegatus
ENSSHAG00000002716	-	100	65.986	ENSDARG00000045696	mrpl23	96	65.986	Danio_rerio
ENSSHAG00000002716	-	100	62.585	ENSDNOG00000047306	-	96	62.585	Dasypus_novemcinctus
ENSSHAG00000002716	-	100	78.231	ENSDORG00000027504	Mrpl23	99	78.014	Dipodomys_ordii
ENSSHAG00000002716	-	100	42.208	FBgn0035335	mRpL23	97	42.208	Drosophila_melanogaster
ENSSHAG00000002716	-	100	79.730	ENSEASG00005000456	-	54	79.730	Equus_asinus_asinus
ENSSHAG00000002716	-	100	80.405	ENSECAG00000024486	-	51	80.405	Equus_caballus
ENSSHAG00000002716	-	100	65.306	ENSELUG00000022256	RM23	97	65.306	Esox_lucius
ENSSHAG00000002716	-	100	79.730	ENSFCAG00000018795	-	96	79.730	Felis_catus
ENSSHAG00000002716	-	99	69.655	ENSFALG00000011598	-	95	70.068	Ficedula_albicollis
ENSSHAG00000002716	-	100	77.551	ENSFDAG00000013606	-	96	77.551	Fukomys_damarensis
ENSSHAG00000002716	-	100	68.027	ENSFHEG00000010978	mrpl23	92	68.027	Fundulus_heteroclitus
ENSSHAG00000002716	-	99	64.828	ENSGMOG00000004509	mrpl23	100	64.828	Gadus_morhua
ENSSHAG00000002716	-	100	70.748	ENSGALG00000006561	-	68	70.748	Gallus_gallus
ENSSHAG00000002716	-	100	69.388	ENSGAFG00000021827	mrpl23	95	69.388	Gambusia_affinis
ENSSHAG00000002716	-	100	69.388	ENSGACG00000011130	mrpl23	95	69.388	Gasterosteus_aculeatus
ENSSHAG00000002716	-	100	70.748	ENSGAGG00000023827	-	95	70.748	Gopherus_agassizii
ENSSHAG00000002716	-	100	76.871	ENSGGOG00000000333	-	83	76.871	Gorilla_gorilla
ENSSHAG00000002716	-	100	70.748	ENSHBUG00000023397	mrpl23	95	70.748	Haplochromis_burtoni
ENSSHAG00000002716	-	100	74.830	ENSHGLG00000016722	-	96	74.830	Heterocephalus_glaber_female
ENSSHAG00000002716	-	100	74.830	ENSHGLG00100003075	-	96	74.830	Heterocephalus_glaber_male
ENSSHAG00000002716	-	100	70.068	ENSHCOG00000009092	mrpl23	95	70.068	Hippocampus_comes
ENSSHAG00000002716	-	100	66.667	ENSIPUG00000005383	mrpl23	96	66.667	Ictalurus_punctatus
ENSSHAG00000002716	-	100	76.190	ENSSTOG00000024573	-	96	76.190	Ictidomys_tridecemlineatus
ENSSHAG00000002716	-	100	74.830	ENSJJAG00000003519	Mrpl23	96	74.830	Jaculus_jaculus
ENSSHAG00000002716	-	100	66.667	ENSKMAG00000001599	mrpl23	95	66.667	Kryptolebias_marmoratus
ENSSHAG00000002716	-	100	70.748	ENSLBEG00000002580	mrpl23	95	70.748	Labrus_bergylta
ENSSHAG00000002716	-	100	68.707	ENSLACG00000011528	mrpl23	96	68.707	Latimeria_chalumnae
ENSSHAG00000002716	-	100	69.388	ENSLOCG00000001825	mrpl23	96	69.388	Lepisosteus_oculatus
ENSSHAG00000002716	-	73	71.296	ENSMFAG00000039715	-	100	71.296	Macaca_fascicularis
ENSSHAG00000002716	-	100	78.231	ENSMFAG00000034529	-	96	78.231	Macaca_fascicularis
ENSSHAG00000002716	-	100	78.231	ENSMMUG00000031268	MRPL23	96	78.231	Macaca_mulatta
ENSSHAG00000002716	-	100	77.551	ENSMNEG00000036690	-	96	77.551	Macaca_nemestrina
ENSSHAG00000002716	-	73	72.222	ENSMNEG00000033446	-	100	72.222	Macaca_nemestrina
ENSSHAG00000002716	-	100	77.551	ENSMLEG00000015767	-	100	77.551	Mandrillus_leucophaeus
ENSSHAG00000002716	-	100	71.429	ENSMAMG00000003609	mrpl23	95	71.429	Mastacembelus_armatus
ENSSHAG00000002716	-	100	71.429	ENSMZEG00005017456	mrpl23	95	71.429	Maylandia_zebra
ENSSHAG00000002716	-	100	68.027	ENSMGAG00000007978	-	97	68.027	Meleagris_gallopavo
ENSSHAG00000002716	-	100	75.510	ENSMAUG00000018693	Mrpl23	100	75.510	Mesocricetus_auratus
ENSSHAG00000002716	-	100	82.313	ENSMICG00000042091	-	94	82.313	Microcebus_murinus
ENSSHAG00000002716	-	100	75.510	ENSMOCG00000018436	Mrpl23	96	75.510	Microtus_ochrogaster
ENSSHAG00000002716	-	100	68.027	ENSMMOG00000018097	mrpl23	95	68.027	Mola_mola
ENSSHAG00000002716	-	100	84.354	ENSMODG00000003437	-	96	84.354	Monodelphis_domestica
ENSSHAG00000002716	-	100	69.388	ENSMALG00000014571	mrpl23	99	69.388	Monopterus_albus
ENSSHAG00000002716	-	100	75.510	MGP_CAROLIEiJ_G0030727	Mrpl23	96	75.510	Mus_caroli
ENSSHAG00000002716	-	100	74.830	ENSMUSG00000037772	Mrpl23	96	74.830	Mus_musculus
ENSSHAG00000002716	-	100	75.676	MGP_PahariEiJ_G0013923	Mrpl23	96	75.676	Mus_pahari
ENSSHAG00000002716	-	100	75.510	MGP_SPRETEiJ_G0031836	Mrpl23	96	75.510	Mus_spretus
ENSSHAG00000002716	-	100	78.000	ENSMPUG00000005658	-	96	78.667	Mustela_putorius_furo
ENSSHAG00000002716	-	100	71.622	ENSMPUG00000002923	-	95	71.622	Mustela_putorius_furo
ENSSHAG00000002716	-	76	82.883	ENSNGAG00000012877	-	81	82.883	Nannospalax_galili
ENSSHAG00000002716	-	100	76.190	ENSNGAG00000023444	-	100	76.190	Nannospalax_galili
ENSSHAG00000002716	-	100	71.429	ENSNBRG00000007183	mrpl23	95	71.429	Neolamprologus_brichardi
ENSSHAG00000002716	-	100	77.551	ENSNLEG00000026950	-	96	77.551	Nomascus_leucogenys
ENSSHAG00000002716	-	63	83.871	ENSOPRG00000018353	-	68	83.871	Ochotona_princeps
ENSSHAG00000002716	-	100	74.830	ENSODEG00000017262	-	96	74.830	Octodon_degus
ENSSHAG00000002716	-	99	64.384	ENSODEG00000012131	-	95	64.384	Octodon_degus
ENSSHAG00000002716	-	100	71.429	ENSONIG00000014500	mrpl23	92	71.429	Oreochromis_niloticus
ENSSHAG00000002716	-	99	69.178	ENSORLG00000025383	mrpl23	95	69.178	Oryzias_latipes
ENSSHAG00000002716	-	99	69.178	ENSORLG00020008379	mrpl23	95	69.178	Oryzias_latipes_hni
ENSSHAG00000002716	-	100	68.707	ENSOMEG00000019132	mrpl23	76	68.707	Oryzias_melastigma
ENSSHAG00000002716	-	100	77.551	ENSOGAG00000029988	-	96	77.551	Otolemur_garnettii
ENSSHAG00000002716	-	94	74.638	ENSOARG00000000706	-	86	74.638	Ovis_aries
ENSSHAG00000002716	-	100	76.871	ENSPPAG00000034414	-	96	76.871	Pan_paniscus
ENSSHAG00000002716	-	100	79.730	ENSPPRG00000013232	-	97	79.730	Panthera_pardus
ENSSHAG00000002716	-	100	76.871	ENSPTRG00000033746	MRPL23	96	76.871	Pan_troglodytes
ENSSHAG00000002716	-	100	78.231	ENSPANG00000018813	-	96	78.231	Papio_anubis
ENSSHAG00000002716	-	100	68.707	ENSPKIG00000001102	mrpl23	96	68.707	Paramormyrops_kingsleyae
ENSSHAG00000002716	-	87	67.969	ENSPSIG00000012834	-	100	67.969	Pelodiscus_sinensis
ENSSHAG00000002716	-	96	65.248	ENSPMGG00000006407	mrpl23	95	65.248	Periophthalmus_magnuspinnatus
ENSSHAG00000002716	-	100	72.789	ENSPEMG00000018572	Mrpl23	96	72.789	Peromyscus_maniculatus_bairdii
ENSSHAG00000002716	-	99	65.306	ENSPMAG00000005259	mrpl23	95	65.306	Petromyzon_marinus
ENSSHAG00000002716	-	63	95.699	ENSPCIG00000027047	-	58	95.699	Phascolarctos_cinereus
ENSSHAG00000002716	-	100	68.707	ENSPFOG00000014159	mrpl23	95	68.707	Poecilia_formosa
ENSSHAG00000002716	-	100	68.707	ENSPLAG00000023456	mrpl23	96	68.707	Poecilia_latipinna
ENSSHAG00000002716	-	100	70.068	ENSPMEG00000012252	mrpl23	95	70.068	Poecilia_mexicana
ENSSHAG00000002716	-	100	68.707	ENSPREG00000019951	mrpl23	95	68.707	Poecilia_reticulata
ENSSHAG00000002716	-	100	76.190	ENSPPYG00000002918	-	96	76.190	Pongo_abelii
ENSSHAG00000002716	-	100	80.952	ENSPCOG00000026555	-	100	80.952	Propithecus_coquereli
ENSSHAG00000002716	-	81	70.400	ENSPVAG00000000331	-	82	70.400	Pteropus_vampyrus
ENSSHAG00000002716	-	100	71.429	ENSPNYG00000015541	mrpl23	95	71.429	Pundamilia_nyererei
ENSSHAG00000002716	-	100	66.667	ENSPNAG00000010548	mrpl23	96	66.667	Pygocentrus_nattereri
ENSSHAG00000002716	-	100	77.027	ENSRNOG00000020354	Mrpl23	96	77.027	Rattus_norvegicus
ENSSHAG00000002716	-	100	77.551	ENSRBIG00000041638	-	96	77.551	Rhinopithecus_bieti
ENSSHAG00000002716	-	100	77.551	ENSRROG00000004661	-	100	77.551	Rhinopithecus_roxellana
ENSSHAG00000002716	-	100	77.551	ENSSBOG00000025338	-	81	77.551	Saimiri_boliviensis_boliviensis
ENSSHAG00000002716	-	100	68.027	ENSSFOG00015002519	mrpl23	96	68.027	Scleropages_formosus
ENSSHAG00000002716	-	100	67.347	ENSSMAG00000009264	mrpl23	95	67.347	Scophthalmus_maximus
ENSSHAG00000002716	-	100	70.748	ENSSDUG00000019634	mrpl23	99	70.748	Seriola_dumerili
ENSSHAG00000002716	-	100	70.748	ENSSLDG00000012055	mrpl23	95	70.748	Seriola_lalandi_dorsalis
ENSSHAG00000002716	-	100	70.068	ENSSPUG00000002656	-	96	70.068	Sphenodon_punctatus
ENSSHAG00000002716	-	100	71.429	ENSSPAG00000001601	mrpl23	99	71.429	Stegastes_partitus
ENSSHAG00000002716	-	100	74.150	ENSSSCG00000038364	-	96	74.150	Sus_scrofa
ENSSHAG00000002716	-	100	68.027	ENSTGUG00000009338	MRPL23	100	68.027	Taeniopygia_guttata
ENSSHAG00000002716	-	100	66.667	ENSTRUG00000009637	mrpl23	95	66.667	Takifugu_rubripes
ENSSHAG00000002716	-	63	69.892	ENSTNIG00000010463	mrpl23	100	69.892	Tetraodon_nigroviridis
ENSSHAG00000002716	-	98	63.448	ENSTTRG00000009281	-	80	63.448	Tursiops_truncatus
ENSSHAG00000002716	-	100	79.730	ENSUAMG00000020867	-	96	79.730	Ursus_americanus
ENSSHAG00000002716	-	100	79.730	ENSUMAG00000006227	-	82	79.730	Ursus_maritimus
ENSSHAG00000002716	-	100	77.551	ENSVVUG00000002581	-	75	77.551	Vulpes_vulpes
ENSSHAG00000002716	-	100	68.707	ENSXETG00000014017	mrpl23	96	68.707	Xenopus_tropicalis
ENSSHAG00000002716	-	100	58.784	ENSXCOG00000020628	mrpl23	97	58.784	Xiphophorus_couchianus
ENSSHAG00000002716	-	100	68.707	ENSXMAG00000015496	mrpl23	95	68.707	Xiphophorus_maculatus