EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000002719 (Gene tree)
Gene ID: 100932155
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 176110 bases
Position: chrGL834648.1:39628-215737
Accession: 100932155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003069	ResIII	PF04851.15	1e-06	1	1
ENSSHAP00000003069	BRK	PF07533.16	1.4e-30	1	2
ENSSHAP00000003069	BRK	PF07533.16	1.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003105	CHD9-201	8870	XM_003757246	ENSSHAP00000003069	2903 (aa)	XP_003757294	G3VIR5

Gene Model

Click here to download ENSSHAG00000002719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000002719	CHD9	85	71.221	ENSSHAG00000011522	CHD7	97	54.562
ENSSHAG00000002719	CHD9	69	68.089	ENSSHAG00000008118	CHD8	73	68.089
ENSSHAG00000002719	CHD9	65	65.330	ENSSHAG00000017072	CHD6	79	63.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002719	CHD9	100	88.235	ENSG00000177200	CHD9	100	96.226	Homo_sapiens
ENSSHAG00000002719	CHD9	84	71.200	ENSAPOG00000023034	chd9	98	69.265	Acanthochromis_polyacanthus
ENSSHAG00000002719	CHD9	100	87.831	ENSAMEG00000016232	CHD9	99	88.370	Ailuropoda_melanoleuca
ENSSHAG00000002719	CHD9	80	69.766	ENSACIG00000004097	chd9	73	62.460	Amphilophus_citrinellus
ENSSHAG00000002719	CHD9	84	71.597	ENSAOCG00000005487	chd9	99	69.515	Amphiprion_ocellaris
ENSSHAG00000002719	CHD9	84	71.142	ENSAPEG00000009859	chd9	98	69.623	Amphiprion_percula
ENSSHAG00000002719	CHD9	79	71.883	ENSATEG00000002748	chd9	100	62.434	Anabas_testudineus
ENSSHAG00000002719	CHD9	99	85.571	ENSAPLG00000002826	CHD9	74	87.852	Anas_platyrhynchos
ENSSHAG00000002719	CHD9	99	81.765	ENSACAG00000016150	CHD9	98	82.365	Anolis_carolinensis
ENSSHAG00000002719	CHD9	100	88.033	ENSANAG00000015630	CHD9	98	90.545	Aotus_nancymaae
ENSSHAG00000002719	CHD9	86	68.516	ENSAMXG00000005652	chd9	99	68.851	Astyanax_mexicanus
ENSSHAG00000002719	CHD9	100	87.552	ENSBTAG00000002287	CHD9	99	87.812	Bos_taurus
ENSSHAG00000002719	CHD9	100	87.891	ENSCJAG00000001573	CHD9	98	90.909	Callithrix_jacchus
ENSSHAG00000002719	CHD9	100	88.583	ENSCAFG00000009699	CHD9	99	88.539	Canis_familiaris
ENSSHAG00000002719	CHD9	100	88.583	ENSCAFG00020002879	CHD9	98	92.727	Canis_lupus_dingo
ENSSHAG00000002719	CHD9	100	88.407	ENSTSYG00000007693	CHD9	98	92.000	Carlito_syrichta
ENSSHAG00000002719	CHD9	81	70.067	ENSCAPG00000011604	CHD9	81	70.854	Cavia_aperea
ENSSHAG00000002719	CHD9	100	84.285	ENSCPOG00000036544	CHD9	99	84.245	Cavia_porcellus
ENSSHAG00000002719	CHD9	100	87.173	ENSCCAG00000036178	CHD9	98	90.545	Cebus_capucinus
ENSSHAG00000002719	CHD9	100	87.521	ENSCATG00000036753	CHD9	98	90.909	Cercocebus_atys
ENSSHAG00000002719	CHD9	99	87.777	ENSCLAG00000007137	CHD9	99	92.964	Chinchilla_lanigera
ENSSHAG00000002719	CHD9	100	87.667	ENSCSAG00000005311	CHD9	99	87.893	Chlorocebus_sabaeus
ENSSHAG00000002719	CHD9	74	96.154	ENSCHOG00000003935	CHD9	76	96.154	Choloepus_hoffmanni
ENSSHAG00000002719	CHD9	99	87.036	ENSCPBG00000012459	CHD9	99	93.001	Chrysemys_picta_bellii
ENSSHAG00000002719	CHD9	100	87.865	ENSCANG00000030349	CHD9	98	90.909	Colobus_angolensis_palliatus
ENSSHAG00000002719	CHD9	99	85.546	ENSCGRG00001016150	Chd9	99	85.244	Cricetulus_griseus_chok1gshd
ENSSHAG00000002719	CHD9	99	85.546	ENSCGRG00000012850	Chd9	99	92.272	Cricetulus_griseus_crigri
ENSSHAG00000002719	CHD9	79	68.805	ENSCSEG00000009209	chd9	98	66.333	Cynoglossus_semilaevis
ENSSHAG00000002719	CHD9	84	70.988	ENSCVAG00000016195	chd9	97	61.745	Cyprinodon_variegatus
ENSSHAG00000002719	CHD9	81	69.032	ENSDARG00000074498	chd9	98	68.824	Danio_rerio
ENSSHAG00000002719	CHD9	81	89.266	ENSDNOG00000006045	CHD9	99	89.730	Dasypus_novemcinctus
ENSSHAG00000002719	CHD9	69	87.921	ENSDORG00000008523	-	99	88.100	Dipodomys_ordii
ENSSHAG00000002719	CHD9	94	93.158	ENSETEG00000009565	CHD9	93	93.158	Echinops_telfairi
ENSSHAG00000002719	CHD9	99	88.193	ENSEASG00005014832	CHD9	99	91.788	Equus_asinus_asinus
ENSSHAG00000002719	CHD9	100	87.693	ENSECAG00000011505	CHD9	99	88.093	Equus_caballus
ENSSHAG00000002719	CHD9	81	94.475	ENSEEUG00000014515	CHD9	86	94.475	Erinaceus_europaeus
ENSSHAG00000002719	CHD9	74	75.000	ENSELUG00000006031	chd9	98	67.131	Esox_lucius
ENSSHAG00000002719	CHD9	100	88.270	ENSFCAG00000022534	CHD9	98	92.727	Felis_catus
ENSSHAG00000002719	CHD9	83	88.250	ENSFALG00000013276	CHD9	99	88.301	Ficedula_albicollis
ENSSHAG00000002719	CHD9	100	87.242	ENSFDAG00000021037	CHD9	99	87.431	Fukomys_damarensis
ENSSHAG00000002719	CHD9	83	67.026	ENSFHEG00000006068	chd9	97	69.136	Fundulus_heteroclitus
ENSSHAG00000002719	CHD9	67	77.033	ENSGMOG00000006040	chd9	83	77.100	Gadus_morhua
ENSSHAG00000002719	CHD9	96	86.064	ENSGALG00000039178	CHD9	98	86.136	Gallus_gallus
ENSSHAG00000002719	CHD9	84	70.611	ENSGAFG00000010014	chd9	98	67.916	Gambusia_affinis
ENSSHAG00000002719	CHD9	79	68.494	ENSGACG00000016694	chd9	68	74.924	Gasterosteus_aculeatus
ENSSHAG00000002719	CHD9	100	87.827	ENSGGOG00000014816	CHD9	98	91.273	Gorilla_gorilla
ENSSHAG00000002719	CHD9	79	71.112	ENSHBUG00000023322	chd9	97	69.134	Haplochromis_burtoni
ENSSHAG00000002719	CHD9	100	86.967	ENSHGLG00000014938	CHD9	99	93.310	Heterocephalus_glaber_female
ENSSHAG00000002719	CHD9	89	66.173	ENSHCOG00000000937	chd9	99	66.547	Hippocampus_comes
ENSSHAG00000002719	CHD9	80	70.259	ENSIPUG00000016448	chd9	99	71.377	Ictalurus_punctatus
ENSSHAG00000002719	CHD9	100	87.307	ENSSTOG00000022273	CHD9	99	93.426	Ictidomys_tridecemlineatus
ENSSHAG00000002719	CHD9	69	88.740	ENSJJAG00000015741	-	99	88.677	Jaculus_jaculus
ENSSHAG00000002719	CHD9	85	70.926	ENSKMAG00000016784	chd9	98	68.941	Kryptolebias_marmoratus
ENSSHAG00000002719	CHD9	88	65.723	ENSLBEG00000012077	chd9	98	68.329	Labrus_bergylta
ENSSHAG00000002719	CHD9	99	73.263	ENSLACG00000005557	CHD9	99	72.945	Latimeria_chalumnae
ENSSHAG00000002719	CHD9	87	73.325	ENSLOCG00000007225	chd9	99	74.163	Lepisosteus_oculatus
ENSSHAG00000002719	CHD9	100	88.175	ENSLAFG00000015374	CHD9	99	88.162	Loxodonta_africana
ENSSHAG00000002719	CHD9	100	88.072	ENSMFAG00000041354	CHD9	98	90.909	Macaca_fascicularis
ENSSHAG00000002719	CHD9	100	88.072	ENSMMUG00000016310	CHD9	98	90.909	Macaca_mulatta
ENSSHAG00000002719	CHD9	100	87.698	ENSMNEG00000031494	CHD9	100	88.516	Macaca_nemestrina
ENSSHAG00000002719	CHD9	100	88.106	ENSMLEG00000043219	CHD9	98	90.909	Mandrillus_leucophaeus
ENSSHAG00000002719	CHD9	84	70.508	ENSMAMG00000003909	chd9	99	60.692	Mastacembelus_armatus
ENSSHAG00000002719	CHD9	79	71.159	ENSMZEG00005006581	chd9	97	69.348	Maylandia_zebra
ENSSHAG00000002719	CHD9	95	80.946	ENSMGAG00000004642	CHD9	72	82.400	Meleagris_gallopavo
ENSSHAG00000002719	CHD9	100	87.650	ENSMICG00000016679	CHD9	98	91.636	Microcebus_murinus
ENSSHAG00000002719	CHD9	80	70.013	ENSMMOG00000016406	chd9	74	63.435	Mola_mola
ENSSHAG00000002719	CHD9	79	70.093	ENSMALG00000013306	chd9	99	61.191	Monopterus_albus
ENSSHAG00000002719	CHD9	99	84.280	MGP_CAROLIEiJ_G0031364	Chd9	99	83.910	Mus_caroli
ENSSHAG00000002719	CHD9	99	84.442	ENSMUSG00000056608	Chd9	99	91.119	Mus_musculus
ENSSHAG00000002719	CHD9	99	82.567	MGP_PahariEiJ_G0022964	Chd9	99	82.129	Mus_pahari
ENSSHAG00000002719	CHD9	99	84.165	MGP_SPRETEiJ_G0032483	Chd9	99	83.622	Mus_spretus
ENSSHAG00000002719	CHD9	100	87.891	ENSMPUG00000003285	CHD9	99	87.842	Mustela_putorius_furo
ENSSHAG00000002719	CHD9	100	87.307	ENSMLUG00000004456	CHD9	99	87.288	Myotis_lucifugus
ENSSHAG00000002719	CHD9	79	70.853	ENSNBRG00000009423	chd9	97	68.999	Neolamprologus_brichardi
ENSSHAG00000002719	CHD9	90	88.337	ENSNLEG00000001026	CHD9	100	88.341	Nomascus_leucogenys
ENSSHAG00000002719	CHD9	74	100.000	ENSMEUG00000008222	-	84	100.000	Notamacropus_eugenii
ENSSHAG00000002719	CHD9	83	97.744	ENSOPRG00000011168	CHD9	85	95.143	Ochotona_princeps
ENSSHAG00000002719	CHD9	99	87.431	ENSODEG00000004466	CHD9	99	87.093	Octodon_degus
ENSSHAG00000002719	CHD9	80	71.701	ENSONIG00000002816	chd9	99	70.224	Oreochromis_niloticus
ENSSHAG00000002719	CHD9	100	87.831	ENSOANG00000013401	CHD9	99	87.954	Ornithorhynchus_anatinus
ENSSHAG00000002719	CHD9	83	90.339	ENSOCUG00000001016	CHD9	98	90.383	Oryctolagus_cuniculus
ENSSHAG00000002719	CHD9	84	69.828	ENSORLG00000013810	chd9	99	60.345	Oryzias_latipes
ENSSHAG00000002719	CHD9	79	69.906	ENSORLG00020020665	chd9	99	60.838	Oryzias_latipes_hni
ENSSHAG00000002719	CHD9	79	70.263	ENSORLG00015019126	chd9	98	67.921	Oryzias_latipes_hsok
ENSSHAG00000002719	CHD9	100	88.106	ENSOGAG00000002110	CHD9	99	87.712	Otolemur_garnettii
ENSSHAG00000002719	CHD9	100	87.315	ENSOARG00000017664	CHD9	99	87.608	Ovis_aries
ENSSHAG00000002719	CHD9	83	89.068	ENSPPAG00000039388	-	99	89.190	Pan_paniscus
ENSSHAG00000002719	CHD9	100	88.132	ENSPPRG00000004801	CHD9	98	92.364	Panthera_pardus
ENSSHAG00000002719	CHD9	100	87.238	ENSPTIG00000021854	CHD9	99	87.219	Panthera_tigris_altaica
ENSSHAG00000002719	CHD9	100	88.132	ENSPTRG00000008113	CHD9	98	91.273	Pan_troglodytes
ENSSHAG00000002719	CHD9	100	88.003	ENSPANG00000019307	CHD9	99	90.100	Papio_anubis
ENSSHAG00000002719	CHD9	98	59.417	ENSPKIG00000025401	-	72	63.133	Paramormyrops_kingsleyae
ENSSHAG00000002719	CHD9	97	62.734	ENSPKIG00000021876	chd9	68	76.932	Paramormyrops_kingsleyae
ENSSHAG00000002719	CHD9	63	87.500	ENSPSIG00000008099	CHD9	98	87.500	Pelodiscus_sinensis
ENSSHAG00000002719	CHD9	59	56.318	ENSPMAG00000006035	-	73	67.065	Petromyzon_marinus
ENSSHAG00000002719	CHD9	89	95.499	ENSPCIG00000017215	CHD9	98	95.499	Phascolarctos_cinereus
ENSSHAG00000002719	CHD9	79	70.358	ENSPFOG00000015839	chd9	99	59.417	Poecilia_formosa
ENSSHAG00000002719	CHD9	79	71.229	ENSPLAG00000011118	chd9	98	68.617	Poecilia_latipinna
ENSSHAG00000002719	CHD9	79	70.940	ENSPMEG00000015106	chd9	99	60.138	Poecilia_mexicana
ENSSHAG00000002719	CHD9	79	71.398	ENSPREG00000006473	chd9	98	67.834	Poecilia_reticulata
ENSSHAG00000002719	CHD9	100	88.098	ENSPPYG00000007348	CHD9	99	88.054	Pongo_abelii
ENSSHAG00000002719	CHD9	77	93.394	ENSPCAG00000007564	CHD9	86	93.394	Procavia_capensis
ENSSHAG00000002719	CHD9	100	86.653	ENSPCOG00000028433	CHD9	98	92.364	Propithecus_coquereli
ENSSHAG00000002719	CHD9	97	85.014	ENSPVAG00000015617	CHD9	97	84.851	Pteropus_vampyrus
ENSSHAG00000002719	CHD9	93	70.489	ENSPNYG00000010947	chd9	97	69.389	Pundamilia_nyererei
ENSSHAG00000002719	CHD9	89	68.189	ENSPNAG00000024141	chd9	99	69.100	Pygocentrus_nattereri
ENSSHAG00000002719	CHD9	90	81.801	ENSRNOG00000049302	Chd9	100	84.030	Rattus_norvegicus
ENSSHAG00000002719	CHD9	83	90.091	ENSRBIG00000035553	CHD9	99	90.096	Rhinopithecus_bieti
ENSSHAG00000002719	CHD9	83	89.750	ENSRROG00000033278	CHD9	99	90.252	Rhinopithecus_roxellana
ENSSHAG00000002719	CHD9	100	87.930	ENSSBOG00000030240	CHD9	98	90.182	Saimiri_boliviensis_boliviensis
ENSSHAG00000002719	CHD9	86	66.562	ENSSFOG00015001327	chd9	67	75.902	Scleropages_formosus
ENSSHAG00000002719	CHD9	97	63.021	ENSSFOG00015020209	chd9	99	70.429	Scleropages_formosus
ENSSHAG00000002719	CHD9	84	69.796	ENSSMAG00000008953	chd9	95	69.405	Scophthalmus_maximus
ENSSHAG00000002719	CHD9	84	70.888	ENSSDUG00000006139	chd9	98	68.745	Seriola_dumerili
ENSSHAG00000002719	CHD9	84	71.375	ENSSLDG00000017818	chd9	98	69.209	Seriola_lalandi_dorsalis
ENSSHAG00000002719	CHD9	71	92.821	ENSSARG00000010632	CHD9	71	92.821	Sorex_araneus
ENSSHAG00000002719	CHD9	84	70.640	ENSSPAG00000021649	chd9	98	68.957	Stegastes_partitus
ENSSHAG00000002719	CHD9	90	86.282	ENSTGUG00000007476	CHD9	100	86.358	Taeniopygia_guttata
ENSSHAG00000002719	CHD9	57	83.902	ENSTNIG00000003825	chd9	85	83.902	Tetraodon_nigroviridis
ENSSHAG00000002719	CHD9	66	85.135	ENSTBEG00000016052	-	81	85.135	Tupaia_belangeri
ENSSHAG00000002719	CHD9	90	87.533	ENSTTRG00000012674	CHD9	90	87.533	Tursiops_truncatus
ENSSHAG00000002719	CHD9	64	87.594	ENSUAMG00000022706	CHD9	98	92.727	Ursus_americanus
ENSSHAG00000002719	CHD9	90	86.128	ENSUMAG00000004043	CHD9	97	95.842	Ursus_maritimus
ENSSHAG00000002719	CHD9	97	88.802	ENSVPAG00000001374	CHD9	97	88.802	Vicugna_pacos
ENSSHAG00000002719	CHD9	100	88.583	ENSVVUG00000019435	CHD9	99	88.539	Vulpes_vulpes
ENSSHAG00000002719	CHD9	99	73.354	ENSXETG00000000349	chd9	96	77.304	Xenopus_tropicalis
ENSSHAG00000002719	CHD9	79	71.235	ENSXCOG00000012997	chd9	98	68.876	Xiphophorus_couchianus
ENSSHAG00000002719	CHD9	84	70.888	ENSXMAG00000016192	chd9	99	69.475	Xiphophorus_maculatus