EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000002835 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2184 bases
Position: chrGL851008.1:42900-45083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003214	MA3	PF02847.17	6.1e-18	1	1
ENSSHAP00000003213	MA3	PF02847.17	8.2e-18	1	1
ENSSHAP00000003213	MIF4G	PF02854.19	1.3e-11	1	1
ENSSHAP00000003214	MIF4G	PF02854.19	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003250	-	1209	-	ENSSHAP00000003214	403 (aa)	-	G3VJ59
ENSSHAT00000003249	-	1434	-	ENSSHAP00000003213	478 (aa)	-	G3VJ58

Gene Model

Click here to download ENSSHAG00000002835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000002835	-	99	85.158	ENSSHAG00000017998	-	61	84.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002835	-	99	75.912	ENSG00000146909	NOM1	60	64.717	Homo_sapiens
ENSSHAG00000002835	-	99	69.175	ENSAMEG00000001412	NOM1	61	64.932	Ailuropoda_melanoleuca
ENSSHAG00000002835	-	99	63.592	ENSACIG00000018050	nom1	53	63.592	Amphilophus_citrinellus
ENSSHAG00000002835	-	99	62.470	ENSAOCG00000006229	nom1	52	62.470	Amphiprion_ocellaris
ENSSHAG00000002835	-	99	62.470	ENSAPEG00000015994	nom1	52	62.470	Amphiprion_percula
ENSSHAG00000002835	-	99	62.470	ENSATEG00000005405	nom1	50	62.470	Anabas_testudineus
ENSSHAG00000002835	-	99	69.007	ENSAPLG00000006585	NOM1	63	68.039	Anas_platyrhynchos
ENSSHAG00000002835	-	99	63.680	ENSACLG00000000033	nom1	53	63.680	Astatotilapia_calliptera
ENSSHAG00000002835	-	99	60.482	ENSAMXG00000041486	nom1	50	57.077	Astyanax_mexicanus
ENSSHAG00000002835	-	99	68.765	ENSBTAG00000016435	NOM1	53	63.333	Bos_taurus
ENSSHAG00000002835	-	99	73.671	ENSCJAG00000004336	NOM1	59	62.941	Callithrix_jacchus
ENSSHAG00000002835	-	99	69.660	ENSCAFG00020005121	NOM1	50	66.200	Canis_lupus_dingo
ENSSHAG00000002835	-	99	68.281	ENSCHIG00000020102	NOM1	54	62.693	Capra_hircus
ENSSHAG00000002835	-	99	74.209	ENSTSYG00000000227	NOM1	61	63.654	Carlito_syrichta
ENSSHAG00000002835	-	98	72.414	ENSCAPG00000016273	NOM1	78	71.182	Cavia_aperea
ENSSHAG00000002835	-	75	73.955	ENSCCAG00000014944	NOM1	68	74.074	Cebus_capucinus
ENSSHAG00000002835	-	99	70.588	ENSCLAG00000000267	NOM1	59	61.078	Chinchilla_lanigera
ENSSHAG00000002835	-	98	36.855	ENSCING00000005248	-	55	35.835	Ciona_intestinalis
ENSSHAG00000002835	-	99	74.209	ENSCANG00000041984	NOM1	73	71.596	Colobus_angolensis_palliatus
ENSSHAG00000002835	-	99	72.019	ENSCGRG00001020293	Nom1	56	63.257	Cricetulus_griseus_chok1gshd
ENSSHAG00000002835	-	99	72.019	ENSCGRG00000005405	Nom1	77	71.290	Cricetulus_griseus_crigri
ENSSHAG00000002835	-	99	59.903	ENSCSEG00000000932	nom1	51	59.903	Cynoglossus_semilaevis
ENSSHAG00000002835	-	99	63.221	ENSDARG00000060027	nom1	77	63.807	Danio_rerio
ENSSHAG00000002835	-	95	61.869	ENSDORG00000015682	Nom1	66	56.393	Dipodomys_ordii
ENSSHAG00000002835	-	74	48.710	ENSEBUG00000010077	nom1	68	48.710	Eptatretus_burgeri
ENSSHAG00000002835	-	99	72.639	ENSEASG00005001489	NOM1	56	64.622	Equus_asinus_asinus
ENSSHAG00000002835	-	99	72.639	ENSECAG00000007596	NOM1	52	64.286	Equus_caballus
ENSSHAG00000002835	-	99	69.660	ENSFCAG00000006467	NOM1	54	64.877	Felis_catus
ENSSHAG00000002835	-	99	68.039	ENSFALG00000006904	NOM1	71	59.557	Ficedula_albicollis
ENSSHAG00000002835	-	99	69.024	ENSFDAG00000016241	NOM1	50	67.805	Fukomys_damarensis
ENSSHAG00000002835	-	99	61.501	ENSFHEG00000015974	nom1	53	58.691	Fundulus_heteroclitus
ENSSHAG00000002835	-	99	56.618	ENSGMOG00000005129	nom1	53	56.618	Gadus_morhua
ENSSHAG00000002835	-	99	61.501	ENSGAFG00000003211	nom1	50	61.501	Gambusia_affinis
ENSSHAG00000002835	-	100	73.430	ENSGAGG00000014347	NOM1	50	73.188	Gopherus_agassizii
ENSSHAG00000002835	-	99	63.438	ENSHBUG00000014616	nom1	53	63.438	Haplochromis_burtoni
ENSSHAG00000002835	-	50	61.386	ENSHCOG00000011999	-	54	61.386	Hippocampus_comes
ENSSHAG00000002835	-	99	59.080	ENSIPUG00000013980	nom1	54	54.933	Ictalurus_punctatus
ENSSHAG00000002835	-	99	71.324	ENSSTOG00000031736	NOM1	79	64.823	Ictidomys_tridecemlineatus
ENSSHAG00000002835	-	91	72.074	ENSJJAG00000011716	Nom1	76	72.074	Jaculus_jaculus
ENSSHAG00000002835	-	99	62.560	ENSLBEG00000009252	nom1	52	58.093	Labrus_bergylta
ENSSHAG00000002835	-	99	65.854	ENSLACG00000011777	NOM1	50	64.806	Latimeria_chalumnae
ENSSHAG00000002835	-	99	64.891	ENSLOCG00000012452	nom1	51	63.923	Lepisosteus_oculatus
ENSSHAG00000002835	-	99	65.366	ENSLAFG00000007119	NOM1	50	64.390	Loxodonta_africana
ENSSHAG00000002835	-	99	68.281	ENSMMUG00000039033	NOM1	56	59.600	Macaca_mulatta
ENSSHAG00000002835	-	99	75.426	ENSMLEG00000037062	NOM1	77	75.182	Mandrillus_leucophaeus
ENSSHAG00000002835	-	99	63.680	ENSMZEG00005000384	nom1	51	61.305	Maylandia_zebra
ENSSHAG00000002835	-	99	68.537	ENSMGAG00000005051	NOM1	60	67.561	Meleagris_gallopavo
ENSSHAG00000002835	-	99	72.749	ENSMAUG00000017988	Nom1	50	70.192	Mesocricetus_auratus
ENSSHAG00000002835	-	99	71.776	ENSMICG00000017531	NOM1	59	62.955	Microcebus_murinus
ENSSHAG00000002835	-	99	84.185	ENSMODG00000005177	NOM1	53	77.333	Monodelphis_domestica
ENSSHAG00000002835	-	99	61.707	ENSMALG00000008800	nom1	52	61.707	Monopterus_albus
ENSSHAG00000002835	-	99	66.262	ENSMPUG00000009745	NOM1	60	65.534	Mustela_putorius_furo
ENSSHAG00000002835	-	99	70.773	ENSMLUG00000009129	NOM1	80	62.963	Myotis_lucifugus
ENSSHAG00000002835	-	99	63.923	ENSNBRG00000016429	nom1	74	63.923	Neolamprologus_brichardi
ENSSHAG00000002835	-	99	71.671	ENSNLEG00000000238	NOM1	52	66.297	Nomascus_leucogenys
ENSSHAG00000002835	-	99	71.394	ENSODEG00000009399	NOM1	64	65.393	Octodon_degus
ENSSHAG00000002835	-	99	63.438	ENSONIG00000005958	nom1	52	63.438	Oreochromis_niloticus
ENSSHAG00000002835	-	86	77.591	ENSOANG00000006139	-	76	77.159	Ornithorhynchus_anatinus
ENSSHAG00000002835	-	99	74.696	ENSOCUG00000004071	-	53	68.374	Oryctolagus_cuniculus
ENSSHAG00000002835	-	99	62.560	ENSOCUG00000021448	-	57	61.353	Oryctolagus_cuniculus
ENSSHAG00000002835	-	100	61.594	ENSORLG00000010541	nom1	59	55.031	Oryzias_latipes
ENSSHAG00000002835	-	100	61.594	ENSORLG00020010789	nom1	54	61.594	Oryzias_latipes_hni
ENSSHAG00000002835	-	100	61.353	ENSORLG00015010475	nom1	54	61.353	Oryzias_latipes_hsok
ENSSHAG00000002835	-	99	62.136	ENSOMEG00000004219	nom1	57	55.950	Oryzias_melastigma
ENSSHAG00000002835	-	99	73.839	ENSOGAG00000001124	NOM1	67	72.861	Otolemur_garnettii
ENSSHAG00000002835	-	99	68.281	ENSOARG00000007261	NOM1	62	62.693	Ovis_aries
ENSSHAG00000002835	-	99	74.939	ENSPPAG00000041374	NOM1	52	69.111	Pan_paniscus
ENSSHAG00000002835	-	99	69.175	ENSPTIG00000013532	NOM1	63	63.341	Panthera_tigris_altaica
ENSSHAG00000002835	-	99	74.939	ENSPTRG00000019917	NOM1	60	63.743	Pan_troglodytes
ENSSHAG00000002835	-	99	75.182	ENSPANG00000007605	NOM1	59	64.244	Papio_anubis
ENSSHAG00000002835	-	99	56.068	ENSPKIG00000005825	nom1	51	54.502	Paramormyrops_kingsleyae
ENSSHAG00000002835	-	99	73.123	ENSPSIG00000017848	NOM1	69	72.881	Pelodiscus_sinensis
ENSSHAG00000002835	-	99	65.860	ENSPMGG00000002577	nom1	53	63.869	Periophthalmus_magnuspinnatus
ENSSHAG00000002835	-	99	72.749	ENSPEMG00000024180	Nom1	53	66.079	Peromyscus_maniculatus_bairdii
ENSSHAG00000002835	-	99	84.428	ENSPCIG00000027941	NOM1	50	77.434	Phascolarctos_cinereus
ENSSHAG00000002835	-	99	62.379	ENSPFOG00000015771	nom1	58	55.510	Poecilia_formosa
ENSSHAG00000002835	-	99	62.228	ENSPLAG00000007856	nom1	60	55.510	Poecilia_latipinna
ENSSHAG00000002835	-	99	61.985	ENSPMEG00000014155	nom1	51	61.985	Poecilia_mexicana
ENSSHAG00000002835	-	99	61.743	ENSPREG00000008850	nom1	50	61.743	Poecilia_reticulata
ENSSHAG00000002835	-	99	69.830	ENSPCOG00000015222	NOM1	79	68.009	Propithecus_coquereli
ENSSHAG00000002835	-	99	69.100	ENSPVAG00000014760	NOM1	53	63.556	Pteropus_vampyrus
ENSSHAG00000002835	-	99	63.680	ENSPNYG00000006975	nom1	75	62.740	Pundamilia_nyererei
ENSSHAG00000002835	-	99	66.423	ENSRNOG00000048969	AABR07059041.1	51	65.693	Rattus_norvegicus
ENSSHAG00000002835	-	99	73.966	ENSRBIG00000037042	NOM1	65	63.579	Rhinopithecus_bieti
ENSSHAG00000002835	-	99	73.479	ENSRROG00000037293	NOM1	57	64.056	Rhinopithecus_roxellana
ENSSHAG00000002835	-	89	60.705	ENSSFOG00015003196	nom1	76	60.541	Scleropages_formosus
ENSSHAG00000002835	-	99	63.680	ENSSMAG00000011047	nom1	52	63.680	Scophthalmus_maximus
ENSSHAG00000002835	-	99	57.908	ENSSPUG00000002556	NOM1	73	56.934	Sphenodon_punctatus
ENSSHAG00000002835	-	99	62.712	ENSSPAG00000000953	nom1	58	55.268	Stegastes_partitus
ENSSHAG00000002835	-	99	67.554	ENSTGUG00000000702	-	59	66.586	Taeniopygia_guttata
ENSSHAG00000002835	-	82	65.970	ENSTGUG00000016587	-	100	64.776	Taeniopygia_guttata
ENSSHAG00000002835	-	99	61.985	ENSTRUG00000010239	nom1	50	61.985	Takifugu_rubripes
ENSSHAG00000002835	-	99	62.077	ENSTNIG00000012783	nom1	53	61.743	Tetraodon_nigroviridis
ENSSHAG00000002835	-	99	72.397	ENSTTRG00000009691	NOM1	53	66.889	Tursiops_truncatus
ENSSHAG00000002835	-	99	69.903	ENSUMAG00000014275	NOM1	64	65.455	Ursus_maritimus
ENSSHAG00000002835	-	91	67.200	ENSXETG00000021611	nom1	82	69.118	Xenopus_tropicalis
ENSSHAG00000002835	-	99	61.743	ENSXMAG00000002451	nom1	50	61.743	Xiphophorus_maculatus