EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000002844 (Gene tree)
Gene ID: 100921691
Gene Symbol: -
Alias: -
Full Name: PR/SET domain 15
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 82890 bases
Position: chrGL850673.1:43191-126080
Accession: 100921691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003225	zf-C2H2	PF00096.26	3.3e-51	1	6
ENSSHAP00000003225	zf-C2H2	PF00096.26	3.3e-51	2	6
ENSSHAP00000003225	zf-C2H2	PF00096.26	3.3e-51	3	6
ENSSHAP00000003225	zf-C2H2	PF00096.26	3.3e-51	4	6
ENSSHAP00000003225	zf-C2H2	PF00096.26	3.3e-51	5	6
ENSSHAP00000003225	zf-C2H2	PF00096.26	3.3e-51	6	6
ENSSHAP00000003224	zf-C2H2	PF00096.26	5.2e-51	1	6
ENSSHAP00000003224	zf-C2H2	PF00096.26	5.2e-51	2	6
ENSSHAP00000003224	zf-C2H2	PF00096.26	5.2e-51	3	6
ENSSHAP00000003224	zf-C2H2	PF00096.26	5.2e-51	4	6
ENSSHAP00000003224	zf-C2H2	PF00096.26	5.2e-51	5	6
ENSSHAP00000003224	zf-C2H2	PF00096.26	5.2e-51	6	6
ENSSHAP00000003225	zf-met	PF12874.7	5.6e-20	1	2
ENSSHAP00000003225	zf-met	PF12874.7	5.6e-20	2	2
ENSSHAP00000003224	zf-met	PF12874.7	8.4e-20	1	2
ENSSHAP00000003224	zf-met	PF12874.7	8.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003261	-	2421	XM_023501330	ENSSHAP00000003225	806 (aa)	XP_023357098	G3VJ70
ENSSHAT00000003260	-	2481	-	ENSSHAP00000003224	826 (aa)	-	G3VJ69

Gene Model

Click here to download ENSSHAG00000002844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000002844	-	51	35.333	ENSSHAG00000004205	SNAI2	56	34.000
ENSSHAG00000002844	-	61	36.364	ENSSHAG00000004332	-	93	36.364
ENSSHAG00000002844	-	68	34.416	ENSSHAG00000011714	-	59	33.766
ENSSHAG00000002844	-	69	33.333	ENSSHAG00000002263	ZNF652	52	33.333
ENSSHAG00000002844	-	64	31.746	ENSSHAG00000008255	ZNF768	70	30.350
ENSSHAG00000002844	-	67	30.172	ENSSHAG00000003090	-	82	30.172
ENSSHAG00000002844	-	65	32.051	ENSSHAG00000009882	ZBTB16	87	31.250
ENSSHAG00000002844	-	66	42.188	ENSSHAG00000014216	-	82	42.188
ENSSHAG00000002844	-	61	32.743	ENSSHAG00000011015	SNAI1	59	33.333
ENSSHAG00000002844	-	66	31.304	ENSSHAG00000001415	-	85	31.304
ENSSHAG00000002844	-	65	34.746	ENSSHAG00000013079	ZNF236	56	34.579
ENSSHAG00000002844	-	64	35.714	ENSSHAG00000011906	-	70	35.065
ENSSHAG00000002844	-	66	33.824	ENSSHAG00000011347	ZNF668	96	33.824
ENSSHAG00000002844	-	64	35.057	ENSSHAG00000005922	-	50	34.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002844	-	89	71.585	ENSAPOG00000001891	PRDM15	69	69.430	Acanthochromis_polyacanthus
ENSSHAG00000002844	-	97	90.633	ENSAMEG00000002162	PRDM15	66	90.840	Ailuropoda_melanoleuca
ENSSHAG00000002844	-	97	64.668	ENSACIG00000004096	PRDM15	67	66.579	Amphilophus_citrinellus
ENSSHAG00000002844	-	97	69.098	ENSAOCG00000015241	PRDM15	70	70.921	Amphiprion_ocellaris
ENSSHAG00000002844	-	97	69.098	ENSAPEG00000016305	PRDM15	70	71.053	Amphiprion_percula
ENSSHAG00000002844	-	97	68.603	ENSATEG00000003481	PRDM15	67	71.579	Anabas_testudineus
ENSSHAG00000002844	-	100	92.450	ENSAPLG00000001239	PRDM15	71	92.450	Anas_platyrhynchos
ENSSHAG00000002844	-	79	92.394	ENSACAG00000009761	-	100	92.394	Anolis_carolinensis
ENSSHAG00000002844	-	96	69.416	ENSACLG00000026541	PRDM15	88	59.836	Astatotilapia_calliptera
ENSSHAG00000002844	-	98	67.629	ENSAMXG00000008771	PRDM15	69	71.969	Astyanax_mexicanus
ENSSHAG00000002844	-	100	89.122	ENSBTAG00000021253	PRDM15	71	89.122	Bos_taurus
ENSSHAG00000002844	-	96	90.455	ENSCJAG00000013815	PRDM15	98	83.090	Callithrix_jacchus
ENSSHAG00000002844	-	97	91.432	ENSCAFG00000010223	PRDM15	68	91.432	Canis_familiaris
ENSSHAG00000002844	-	52	87.302	ENSCAFG00020016573	-	88	87.302	Canis_lupus_dingo
ENSSHAG00000002844	-	100	89.122	ENSCHIG00000016222	PRDM15	71	85.557	Capra_hircus
ENSSHAG00000002844	-	97	93.214	ENSTSYG00000011542	PRDM15	71	91.343	Carlito_syrichta
ENSSHAG00000002844	-	97	92.958	ENSCCAG00000030489	PRDM15	94	92.505	Cebus_capucinus
ENSSHAG00000002844	-	100	92.813	ENSCPBG00000012917	PRDM15	69	92.813	Chrysemys_picta_bellii
ENSSHAG00000002844	-	96	68.872	ENSCSEG00000013102	PRDM15	66	69.669	Cynoglossus_semilaevis
ENSSHAG00000002844	-	97	70.389	ENSDARG00000098867	PRDM15	72	72.405	Danio_rerio
ENSSHAG00000002844	-	100	76.847	ENSDNOG00000033954	PRDM15	66	77.934	Dasypus_novemcinctus
ENSSHAG00000002844	-	88	44.971	ENSEBUG00000014968	PRDM15	60	44.971	Eptatretus_burgeri
ENSSHAG00000002844	-	100	90.235	ENSEASG00005003891	PRDM15	70	91.805	Equus_asinus_asinus
ENSSHAG00000002844	-	100	90.235	ENSECAG00000017225	PRDM15	67	91.805	Equus_caballus
ENSSHAG00000002844	-	98	68.828	ENSELUG00000023702	PRDM15	69	70.490	Esox_lucius
ENSSHAG00000002844	-	81	87.982	ENSFCAG00000012695	PRDM15	63	83.333	Felis_catus
ENSSHAG00000002844	-	97	92.574	ENSFALG00000002064	PRDM15	80	90.977	Ficedula_albicollis
ENSSHAG00000002844	-	92	72.090	ENSFHEG00000015074	PRDM15	67	71.022	Fundulus_heteroclitus
ENSSHAG00000002844	-	87	71.648	ENSGMOG00000012203	PRDM15	64	71.788	Gadus_morhua
ENSSHAG00000002844	-	100	92.203	ENSGALG00000019178	PRDM15	68	92.203	Gallus_gallus
ENSSHAG00000002844	-	95	69.755	ENSGAFG00000015673	PRDM15	71	69.211	Gambusia_affinis
ENSSHAG00000002844	-	94	68.118	ENSGACG00000020205	PRDM15	70	68.252	Gasterosteus_aculeatus
ENSSHAG00000002844	-	100	92.937	ENSGAGG00000022082	PRDM15	71	92.937	Gopherus_agassizii
ENSSHAG00000002844	-	95	69.770	ENSHBUG00000018577	PRDM15	70	71.447	Haplochromis_burtoni
ENSSHAG00000002844	-	96	67.246	ENSHCOG00000000365	PRDM15	68	70.145	Hippocampus_comes
ENSSHAG00000002844	-	52	56.563	ENSIPUG00000018525	-	76	56.563	Ictalurus_punctatus
ENSSHAG00000002844	-	97	68.610	ENSKMAG00000010411	PRDM15	68	70.658	Kryptolebias_marmoratus
ENSSHAG00000002844	-	95	68.790	ENSLBEG00000013197	PRDM15	73	69.987	Labrus_bergylta
ENSSHAG00000002844	-	97	72.393	ENSLACG00000016206	PRDM15	69	72.346	Latimeria_chalumnae
ENSSHAG00000002844	-	97	71.572	ENSLOCG00000004600	PRDM15	68	73.643	Lepisosteus_oculatus
ENSSHAG00000002844	-	100	91.288	ENSLAFG00000008866	PRDM15	69	92.249	Loxodonta_africana
ENSSHAG00000002844	-	52	89.841	ENSMMUG00000044966	-	89	89.841	Macaca_mulatta
ENSSHAG00000002844	-	96	68.159	ENSMAMG00000004457	PRDM15	73	69.974	Mastacembelus_armatus
ENSSHAG00000002844	-	96	69.416	ENSMZEG00005022947	PRDM15	70	71.316	Maylandia_zebra
ENSSHAG00000002844	-	97	92.455	ENSMGAG00000014568	PRDM15	67	90.977	Meleagris_gallopavo
ENSSHAG00000002844	-	100	90.111	ENSMICG00000013783	PRDM15	68	91.549	Microcebus_murinus
ENSSHAG00000002844	-	97	66.582	ENSMMOG00000005844	PRDM15	73	67.852	Mola_mola
ENSSHAG00000002844	-	97	95.507	ENSMODG00000020959	PRDM15	70	95.507	Monodelphis_domestica
ENSSHAG00000002844	-	94	70.535	ENSMALG00000002361	PRDM15	67	71.073	Monopterus_albus
ENSSHAG00000002844	-	100	89.506	ENSMPUG00000008938	PRDM15	76	90.921	Mustela_putorius_furo
ENSSHAG00000002844	-	97	79.899	ENSMLUG00000001078	PRDM15	64	79.899	Myotis_lucifugus
ENSSHAG00000002844	-	95	68.855	ENSNBRG00000018449	PRDM15	70	70.518	Neolamprologus_brichardi
ENSSHAG00000002844	-	100	66.867	ENSONIG00000011354	PRDM15	64	68.342	Oreochromis_niloticus
ENSSHAG00000002844	-	97	91.239	ENSOANG00000006445	PRDM15	70	91.239	Ornithorhynchus_anatinus
ENSSHAG00000002844	-	99	67.995	ENSORLG00000012533	PRDM15	69	70.732	Oryzias_latipes
ENSSHAG00000002844	-	99	67.995	ENSORLG00020014595	PRDM15	71	70.051	Oryzias_latipes_hni
ENSSHAG00000002844	-	99	68.116	ENSORLG00015021496	PRDM15	69	70.732	Oryzias_latipes_hsok
ENSSHAG00000002844	-	53	57.538	ENSOMEG00000011915	-	91	57.538	Oryzias_melastigma
ENSSHAG00000002844	-	100	90.123	ENSOGAG00000006444	PRDM15	68	91.688	Otolemur_garnettii
ENSSHAG00000002844	-	100	88.010	ENSOARG00000010468	PRDM15	69	89.744	Ovis_aries
ENSSHAG00000002844	-	100	89.791	ENSPPRG00000007591	PRDM15	69	91.210	Panthera_pardus
ENSSHAG00000002844	-	98	68.711	ENSPKIG00000020637	PRDM15	70	71.244	Paramormyrops_kingsleyae
ENSSHAG00000002844	-	100	92.441	ENSPSIG00000006944	PRDM15	83	92.441	Pelodiscus_sinensis
ENSSHAG00000002844	-	92	69.629	ENSPMGG00000003004	PRDM15	81	70.159	Periophthalmus_magnuspinnatus
ENSSHAG00000002844	-	68	66.849	ENSPMAG00000009794	PRDM15	62	66.606	Petromyzon_marinus
ENSSHAG00000002844	-	100	97.891	ENSPCIG00000011005	PRDM15	73	97.891	Phascolarctos_cinereus
ENSSHAG00000002844	-	96	69.057	ENSPFOG00000014213	PRDM15	62	69.961	Poecilia_formosa
ENSSHAG00000002844	-	95	69.487	ENSPLAG00000016134	PRDM15	70	69.833	Poecilia_latipinna
ENSSHAG00000002844	-	95	69.487	ENSPMEG00000014510	PRDM15	67	69.833	Poecilia_mexicana
ENSSHAG00000002844	-	97	68.256	ENSPREG00000009745	PRDM15	69	69.755	Poecilia_reticulata
ENSSHAG00000002844	-	97	92.061	ENSPCOG00000017473	PRDM15	68	92.061	Propithecus_coquereli
ENSSHAG00000002844	-	95	69.872	ENSPNYG00000022279	PRDM15	72	71.184	Pundamilia_nyererei
ENSSHAG00000002844	-	98	65.851	ENSPNAG00000021304	PRDM15	70	70.093	Pygocentrus_nattereri
ENSSHAG00000002844	-	52	89.841	ENSRROG00000029676	-	92	89.841	Rhinopithecus_roxellana
ENSSHAG00000002844	-	96	70.663	ENSSFOG00015013930	PRDM15	78	72.259	Scleropages_formosus
ENSSHAG00000002844	-	97	68.228	ENSSMAG00000001190	PRDM15	68	70.210	Scophthalmus_maximus
ENSSHAG00000002844	-	94	72.281	ENSSDUG00000018835	PRDM15	69	72.281	Seriola_dumerili
ENSSHAG00000002844	-	95	70.026	ENSSLDG00000004428	PRDM15	71	71.958	Seriola_lalandi_dorsalis
ENSSHAG00000002844	-	100	91.985	ENSSPUG00000013355	PRDM15	72	92.109	Sphenodon_punctatus
ENSSHAG00000002844	-	97	68.480	ENSSPAG00000010791	PRDM15	69	72.011	Stegastes_partitus
ENSSHAG00000002844	-	100	89.370	ENSSSCG00000012084	PRDM15	70	90.653	Sus_scrofa
ENSSHAG00000002844	-	97	93.214	ENSTGUG00000005437	PRDM15	83	91.595	Taeniopygia_guttata
ENSSHAG00000002844	-	96	66.040	ENSTRUG00000001452	PRDM15	77	67.012	Takifugu_rubripes
ENSSHAG00000002844	-	98	65.105	ENSTNIG00000008583	PRDM15	69	67.490	Tetraodon_nigroviridis
ENSSHAG00000002844	-	98	64.277	ENSTNIG00000004148	-	69	66.623	Tetraodon_nigroviridis
ENSSHAG00000002844	-	100	88.504	ENSTTRG00000012632	PRDM15	59	90.026	Tursiops_truncatus
ENSSHAG00000002844	-	51	85.993	ENSUMAG00000025628	-	88	85.993	Ursus_maritimus
ENSSHAG00000002844	-	97	90.701	ENSVVUG00000016527	PRDM15	69	90.701	Vulpes_vulpes
ENSSHAG00000002844	-	95	69.666	ENSXMAG00000013849	PRDM15	70	69.872	Xiphophorus_maculatus