EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000002858 (Gene tree)
Gene ID
100926404
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
24643 bases
Position
chrGL856862.1:43810-68452
Accession
100926404
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000003240RNA_pol_Rpb1_5PF04998.175.2e-10111
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18126
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18226
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18326
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18426
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18526
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18626
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18726
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18826
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-18926
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181026
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181126
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181226
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181326
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181426
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181526
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181626
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181726
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181826
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-181926
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182026
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182126
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182226
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182326
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182426
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182526
ENSSHAP00000003240RNA_pol_Rpb1_RPF05001.131.3e-182626
ENSSHAP00000003240RNA_pol_Rpb1_4PF05000.173.2e-3811
ENSSHAP00000003240RNA_pol_Rpb1_2PF00623.201e-7411
ENSSHAP00000003240RNA_pol_Rpb1_3PF04983.181e-4911
ENSSHAP00000003240RNA_pol_Rpb1_1PF04997.121.3e-10811
ENSSHAP00000003240RNA_pol_Rpb1_7PF04990.121.8e-5411
ENSSHAP00000003240RNA_pol_Rpb1_6PF04992.143.8e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000003276-6222XM_003768768ENSSHAP000000032401921 (aa)XP_003768816G3VJ85
Gene Model
Click here to download ENSSHAG00000002858's gene model file
Pathways
Pathway IDPathway NameSource
shr03020RNA polymeraseKEGG
shr05016Huntington diseaseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002858's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000002858-5342.478ENSSHAG00000014739POLR1A6732.381
ENSSHAG00000002858-6838.546ENSSHAG00000007588POLR3A8638.546
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000002858-8494.172ENSAPOG00000006552polr2a9094.165Acanthochromis_polyacanthus
ENSSHAG00000002858-8499.257ENSAMEG00000016265-9299.257Ailuropoda_melanoleuca
ENSSHAG00000002858-8494.296ENSAOCG00000004255polr2a9094.289Amphiprion_ocellaris
ENSSHAG00000002858-8494.296ENSAPEG00000012623polr2a9394.289Amphiprion_percula
ENSSHAG00000002858-8494.110ENSATEG00000019644polr2a9394.103Anabas_testudineus
ENSSHAG00000002858-10095.939ENSACAG00000014561POLR2A9298.076Anolis_carolinensis
ENSSHAG00000002858-10094.619ENSANAG00000020093-10095.515Aotus_nancymaae
ENSSHAG00000002858-8493.924ENSACLG00000006735polr2a9393.917Astatotilapia_calliptera
ENSSHAG00000002858-8494.544ENSAMXG00000020046polr2a9394.538Astyanax_mexicanus
ENSSHAG00000002858-8499.441ENSBTAG00000046765POLR2A9299.441Bos_taurus
ENSSHAG00000002858-10096.851ENSCAFG00000016532POLR2A9998.322Canis_familiaris
ENSSHAG00000002858-10096.195ENSCAFG00020007929-10094.897Canis_lupus_dingo
ENSSHAG00000002858-8499.441ENSCHIG00000027173-9299.441Capra_hircus
ENSSHAG00000002858-10096.724ENSTSYG00000012803-10096.724Carlito_syrichta
ENSSHAG00000002858-9895.164ENSCAPG00000001882-9798.037Cavia_aperea
ENSSHAG00000002858-10095.246ENSCPOG00000014812-9798.075Cavia_porcellus
ENSSHAG00000002858-10094.619ENSCCAG00000020938-10095.515Cebus_capucinus
ENSSHAG00000002858-10096.396ENSCATG00000013680-10094.845Cercocebus_atys
ENSSHAG00000002858-10096.168ENSCLAG00000012196-10096.168Chinchilla_lanigera
ENSSHAG00000002858-10089.545ENSCSAG00000011644-9290.253Chlorocebus_sabaeus
ENSSHAG00000002858-10091.624ENSCPBG00000012697POLR2A10091.658Chrysemys_picta_bellii
ENSSHAG00000002858-9776.367ENSCING00000007884-9976.627Ciona_intestinalis
ENSSHAG00000002858-9583.333ENSCSAVG00000008334-9980.180Ciona_savignyi
ENSSHAG00000002858-10096.396ENSCANG00000010622-10094.121Colobus_angolensis_palliatus
ENSSHAG00000002858-8495.583ENSCGRG00000012105Polr2a8595.521Cricetulus_griseus_crigri
ENSSHAG00000002858-8493.676ENSCSEG00000002635polr2a9393.669Cynoglossus_semilaevis
ENSSHAG00000002858-8494.420ENSCVAG00000005156polr2a9394.413Cyprinodon_variegatus
ENSSHAG00000002858-8494.300ENSDARG00000099966polr2a9394.293Danio_rerio
ENSSHAG00000002858-10094.162ENSDNOG00000016482-10093.848Dasypus_novemcinctus
ENSSHAG00000002858-10094.619ENSDORG00000008667Polr2a10095.515Dipodomys_ordii
ENSSHAG00000002858-9968.744FBgn0003277RpII2159774.766Drosophila_melanogaster
ENSSHAG00000002858-9487.560ENSETEG00000002540-9487.525Echinops_telfairi
ENSSHAG00000002858-9287.960ENSEBUG00000013967polr2a8887.368Eptatretus_burgeri
ENSSHAG00000002858-8497.393ENSEASG00005019114-9297.393Equus_asinus_asinus
ENSSHAG00000002858-8499.379ENSECAG00000018485POLR2A9299.379Equus_caballus
ENSSHAG00000002858-8699.266ENSEEUG00000001154-9599.266Erinaceus_europaeus
ENSSHAG00000002858-9190.142ENSELUG00000014284polr2a8490.685Esox_lucius
ENSSHAG00000002858-10095.178ENSFDAG00000008287-9299.379Fukomys_damarensis
ENSSHAG00000002858-8494.420ENSFHEG00000001768polr2a9494.413Fundulus_heteroclitus
ENSSHAG00000002858-9790.241ENSGMOG00000007725polr2a10090.297Gadus_morhua
ENSSHAG00000002858-9894.366ENSGAFG00000005389polr2a9994.351Gambusia_affinis
ENSSHAG00000002858-9990.508ENSGACG00000019366polr2a10088.012Gasterosteus_aculeatus
ENSSHAG00000002858-10095.238ENSGGOG00000014800-9697.563Gorilla_gorilla
ENSSHAG00000002858-8493.924ENSHBUG00000018937polr2a9993.917Haplochromis_burtoni
ENSSHAG00000002858-10094.569ENSHGLG00000012381POLR2A10095.464Heterocephalus_glaber_female
ENSSHAG00000002858-10094.569ENSHGLG00100014843POLR2A10095.464Heterocephalus_glaber_male
ENSSHAG00000002858-8493.862ENSHCOG00000011874polr2a9393.855Hippocampus_comes
ENSSHAG00000002858-8494.110ENSIPUG00000002613Polr2a9394.103Ictalurus_punctatus
ENSSHAG00000002858-10094.619ENSSTOG00000001304-10095.515Ictidomys_tridecemlineatus
ENSSHAG00000002858-10095.730ENSJJAG00000013049Polr2a10095.730Jaculus_jaculus
ENSSHAG00000002858-8385.104ENSKMAG00000016343polr2a8689.286Kryptolebias_marmoratus
ENSSHAG00000002858-8494.048ENSLBEG00000027652polr2a9394.041Labrus_bergylta
ENSSHAG00000002858-8287.034ENSLACG00000012071POLR2A9296.552Latimeria_chalumnae
ENSSHAG00000002858-8493.827ENSLOCG00000013863polr2a8694.410Lepisosteus_oculatus
ENSSHAG00000002858-10095.575ENSLAFG00000008626-10097.605Loxodonta_africana
ENSSHAG00000002858-5197.855ENSMFAG00000007042-9997.855Macaca_fascicularis
ENSSHAG00000002858-10094.619ENSMMUG00000023620-10095.515Macaca_mulatta
ENSSHAG00000002858-10092.868ENSMNEG00000040407-9199.007Macaca_nemestrina
ENSSHAG00000002858-8493.416ENSMLEG00000030263-9997.855Mandrillus_leucophaeus
ENSSHAG00000002858-8494.110ENSMAMG00000003351polr2a9394.103Mastacembelus_armatus
ENSSHAG00000002858-8493.924ENSMZEG00005021429polr2a9393.917Maylandia_zebra
ENSSHAG00000002858-5199.286ENSMAUG00000021055-9999.286Mesocricetus_auratus
ENSSHAG00000002858-10095.747ENSMICG00000013372-9898.158Microcebus_murinus
ENSSHAG00000002858-10089.362ENSMOCG00000018279Polr2a10091.780Microtus_ochrogaster
ENSSHAG00000002858-8493.614ENSMMOG00000012515polr2a9593.606Mola_mola
ENSSHAG00000002858-10097.513ENSMODG00000007009-10097.289Monodelphis_domestica
ENSSHAG00000002858-9091.337ENSMALG00000008716polr2a9991.993Monopterus_albus
ENSSHAG00000002858-10094.569MGP_CAROLIEiJ_G0016587Polr2a10095.464Mus_caroli
ENSSHAG00000002858-10094.569ENSMUSG00000005198Polr2a10095.464Mus_musculus
ENSSHAG00000002858-10095.245MGP_PahariEiJ_G0017718Polr2a9297.219Mus_pahari
ENSSHAG00000002858-10094.569MGP_SPRETEiJ_G0017423Polr2a10095.464Mus_spretus
ENSSHAG00000002858-8499.379ENSMPUG00000009648-9299.379Mustela_putorius_furo
ENSSHAG00000002858-10096.552ENSMLUG00000009088-9298.822Myotis_lucifugus
ENSSHAG00000002858-10094.619ENSNGAG00000002543Polr2a10095.515Nannospalax_galili
ENSSHAG00000002858-10095.846ENSNLEG00000009460-10095.515Nomascus_leucogenys
ENSSHAG00000002858-93100.000ENSMEUG00000008611-93100.000Notamacropus_eugenii
ENSSHAG00000002858-8299.242ENSOPRG00000015116-9999.242Ochotona_princeps
ENSSHAG00000002858-10095.179ENSODEG00000017674-10095.179Octodon_degus
ENSSHAG00000002858-8494.110ENSONIG00000009231polr2a9394.103Oreochromis_niloticus
ENSSHAG00000002858-10096.648ENSOCUG00000017929-10096.920Oryctolagus_cuniculus
ENSSHAG00000002858-8494.048ENSORLG00000006431polr2a9394.041Oryzias_latipes
ENSSHAG00000002858-8494.048ENSORLG00020010235polr2a9394.041Oryzias_latipes_hni
ENSSHAG00000002858-8494.048ENSORLG00015007075polr2a9394.041Oryzias_latipes_hsok
ENSSHAG00000002858-9194.158ENSOMEG00000010713polr2a10094.158Oryzias_melastigma
ENSSHAG00000002858-8499.255ENSOGAG00000033608-9299.255Otolemur_garnettii
ENSSHAG00000002858-9696.720ENSOARG00000013874-10096.604Ovis_aries
ENSSHAG00000002858-10094.742ENSPPAG00000043734-10095.907Pan_paniscus
ENSSHAG00000002858-10095.846ENSPTRG00000008691POLR2A10095.515Pan_troglodytes
ENSSHAG00000002858-10096.396ENSPANG00000024099-10094.845Papio_anubis
ENSSHAG00000002858-7993.018ENSPKIG00000005727polr2a8584.178Paramormyrops_kingsleyae
ENSSHAG00000002858-9896.661ENSPSIG00000014006POLR2A10096.661Pelodiscus_sinensis
ENSSHAG00000002858-10094.043ENSPMGG00000019734polr2a9994.475Periophthalmus_magnuspinnatus
ENSSHAG00000002858-10094.619ENSPEMG00000012521Polr2a10095.515Peromyscus_maniculatus_bairdii
ENSSHAG00000002858-88100.000ENSPCIG00000028851-82100.000Phascolarctos_cinereus
ENSSHAG00000002858-8494.358ENSPFOG00000007890polr2a8494.351Poecilia_formosa
ENSSHAG00000002858-8494.358ENSPLAG00000007399polr2a8494.351Poecilia_latipinna
ENSSHAG00000002858-8494.358ENSPMEG00000002071polr2a8494.351Poecilia_mexicana
ENSSHAG00000002858-8494.296ENSPREG00000013122polr2a9394.289Poecilia_reticulata
ENSSHAG00000002858-10097.699ENSPPYG00000007924-9299.441Pongo_abelii
ENSSHAG00000002858-7699.211ENSPCAG00000006951-8499.211Procavia_capensis
ENSSHAG00000002858-10095.869ENSPCOG00000025260-10095.464Propithecus_coquereli
ENSSHAG00000002858-8499.131ENSPVAG00000005069-9299.131Pteropus_vampyrus
ENSSHAG00000002858-9794.081ENSPNYG00000022340polr2a9393.979Pundamilia_nyererei
ENSSHAG00000002858-8494.358ENSPNAG00000011237polr2a9394.351Pygocentrus_nattereri
ENSSHAG00000002858-8499.441ENSRNOG00000028834Polr2a9299.441Rattus_norvegicus
ENSSHAG00000002858-10095.984ENSRBIG00000002471-10094.550Rhinopithecus_bieti
ENSSHAG00000002858-10097.402ENSRROG00000029583-10095.219Rhinopithecus_roxellana
ENSSHAG00000002858-8350.341YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSSHAG00000002858-10094.619ENSSBOG00000000808-10095.515Saimiri_boliviensis_boliviensis
ENSSHAG00000002858-8494.420ENSSFOG00015023275polr2a9394.413Scleropages_formosus
ENSSHAG00000002858-8493.862ENSSMAG00000009137polr2a9293.855Scophthalmus_maximus
ENSSHAG00000002858-8494.296ENSSDUG00000020466polr2a9394.289Seriola_dumerili
ENSSHAG00000002858-8494.296ENSSLDG00000020613polr2a9394.289Seriola_lalandi_dorsalis
ENSSHAG00000002858-9694.557ENSSARG00000005875-9994.557Sorex_araneus
ENSSHAG00000002858-10094.296ENSSPAG00000016741polr2a9494.289Stegastes_partitus
ENSSHAG00000002858-8498.510ENSSSCG00000028278-9298.510Sus_scrofa
ENSSHAG00000002858-9988.352ENSTRUG00000012320polr2a8188.337Takifugu_rubripes
ENSSHAG00000002858-9392.684ENSTNIG00000010136polr2a10092.675Tetraodon_nigroviridis
ENSSHAG00000002858-7499.441ENSTBEG00000013294-5899.441Tupaia_belangeri
ENSSHAG00000002858-10095.533ENSTTRG00000014273-9297.579Tursiops_truncatus
ENSSHAG00000002858-9596.347ENSUAMG00000014866-10099.071Ursus_americanus
ENSSHAG00000002858-9994.043ENSUMAG00000015732-9999.441Ursus_maritimus
ENSSHAG00000002858-65100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSSHAG00000002858-10098.455ENSVVUG00000027878-10096.504Vulpes_vulpes
ENSSHAG00000002858-9994.815ENSXETG00000012465polr2a9297.042Xenopus_tropicalis
ENSSHAG00000002858-9192.126ENSXCOG00000001804polr2a9492.117Xiphophorus_couchianus
ENSSHAG00000002858-8494.358ENSXMAG00000015687polr2a9394.351Xiphophorus_maculatus

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