EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000002871 (Gene tree)
Gene ID: 100926958
Gene Symbol: SRSF5
Alias: HRS|SFRS5|SRP40
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 3292 bases
Position: chrGL834554.1:44124-47415
Accession: 100926958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003255	RRM_1	PF00076.22	1.8e-31	1	2
ENSSHAP00000003255	RRM_1	PF00076.22	1.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003291	SRSF5-201	801	-	ENSSHAP00000003255	266 (aa)	XP_003756430	G3VJA0

Gene Model

Click here to download ENSSHAG00000002871's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG
shr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000002871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000002871	SRSF5	67	57.576	ENSSHAG00000012805	SRSF6	52	65.000
ENSSHAG00000002871	SRSF5	61	44.910	ENSSHAG00000002552	-	65	46.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002871	SRSF5	100	96.691	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSSHAG00000002871	SRSF5	68	83.069	ENSAPOG00000008642	srsf5b	63	83.784	Acanthochromis_polyacanthus
ENSSHAG00000002871	SRSF5	67	99.441	ENSAMEG00000014574	SRSF5	66	99.441	Ailuropoda_melanoleuca
ENSSHAG00000002871	SRSF5	93	72.015	ENSACIG00000010742	srsf5b	81	75.969	Amphilophus_citrinellus
ENSSHAG00000002871	SRSF5	97	72.932	ENSAOCG00000005719	srsf5b	63	83.784	Amphiprion_ocellaris
ENSSHAG00000002871	SRSF5	97	72.932	ENSAPEG00000007830	srsf5b	63	83.784	Amphiprion_percula
ENSSHAG00000002871	SRSF5	93	74.902	ENSATEG00000019112	srsf5b	63	83.243	Anabas_testudineus
ENSSHAG00000002871	SRSF5	100	95.131	ENSAPLG00000014681	SRSF5	100	95.131	Anas_platyrhynchos
ENSSHAG00000002871	SRSF5	100	97.753	ENSACAG00000005143	SRSF5	100	97.753	Anolis_carolinensis
ENSSHAG00000002871	SRSF5	100	96.324	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSSHAG00000002871	SRSF5	93	72.285	ENSACLG00000026424	srsf5b	63	82.703	Astatotilapia_calliptera
ENSSHAG00000002871	SRSF5	68	83.243	ENSAMXG00000011932	srsf5b	84	79.200	Astyanax_mexicanus
ENSSHAG00000002871	SRSF5	67	99.441	ENSBTAG00000011596	SRSF5	66	99.441	Bos_taurus
ENSSHAG00000002871	SRSF5	100	96.691	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSSHAG00000002871	SRSF5	67	99.441	ENSCAFG00000016589	SRSF5	66	99.441	Canis_familiaris
ENSSHAG00000002871	SRSF5	67	99.441	ENSCAFG00020005661	SRSF5	66	99.441	Canis_lupus_dingo
ENSSHAG00000002871	SRSF5	100	91.606	ENSCHIG00000016794	SRSF5	65	99.441	Capra_hircus
ENSSHAG00000002871	SRSF5	67	99.441	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSSHAG00000002871	SRSF5	95	92.941	ENSCAPG00000008801	SRSF5	65	99.441	Cavia_aperea
ENSSHAG00000002871	SRSF5	100	95.255	ENSCPOG00000039926	SRSF5	100	95.255	Cavia_porcellus
ENSSHAG00000002871	SRSF5	100	96.691	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSSHAG00000002871	SRSF5	100	97.059	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSSHAG00000002871	SRSF5	100	97.407	ENSCLAG00000004755	SRSF5	100	97.407	Chinchilla_lanigera
ENSSHAG00000002871	SRSF5	100	96.691	ENSCSAG00000013041	SRSF5	100	96.691	Chlorocebus_sabaeus
ENSSHAG00000002871	SRSF5	100	98.872	ENSCPBG00000021653	SRSF5	100	98.872	Chrysemys_picta_bellii
ENSSHAG00000002871	SRSF5	100	96.691	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSSHAG00000002871	SRSF5	67	99.441	ENSCGRG00001015339	Srsf5	67	99.441	Cricetulus_griseus_chok1gshd
ENSSHAG00000002871	SRSF5	67	99.441	ENSCGRG00000009833	Srsf5	67	99.441	Cricetulus_griseus_crigri
ENSSHAG00000002871	SRSF5	89	74.409	ENSCSEG00000003801	srsf5b	64	82.888	Cynoglossus_semilaevis
ENSSHAG00000002871	SRSF5	68	83.069	ENSCVAG00000017240	srsf5b	71	78.017	Cyprinodon_variegatus
ENSSHAG00000002871	SRSF5	67	82.967	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSSHAG00000002871	SRSF5	67	99.441	ENSDNOG00000006160	SRSF5	67	99.441	Dasypus_novemcinctus
ENSSHAG00000002871	SRSF5	67	99.441	ENSDORG00000003989	Srsf5	67	99.441	Dipodomys_ordii
ENSSHAG00000002871	SRSF5	67	87.151	ENSETEG00000020396	SRSF5	66	89.385	Echinops_telfairi
ENSSHAG00000002871	SRSF5	68	65.405	ENSEBUG00000006229	srsf5b	68	66.292	Eptatretus_burgeri
ENSSHAG00000002871	SRSF5	67	99.441	ENSEASG00005016615	SRSF5	66	99.441	Equus_asinus_asinus
ENSSHAG00000002871	SRSF5	90	92.917	ENSECAG00000026873	SRSF5	90	98.387	Equus_caballus
ENSSHAG00000002871	SRSF5	68	79.381	ENSELUG00000019852	srsf5b	85	69.863	Esox_lucius
ENSSHAG00000002871	SRSF5	67	99.441	ENSFCAG00000008848	SRSF5	99	100.000	Felis_catus
ENSSHAG00000002871	SRSF5	100	96.617	ENSFALG00000004979	SRSF5	100	96.617	Ficedula_albicollis
ENSSHAG00000002871	SRSF5	67	99.441	ENSFDAG00000011562	SRSF5	67	99.441	Fukomys_damarensis
ENSSHAG00000002871	SRSF5	68	83.598	ENSFHEG00000009476	srsf5b	60	82.703	Fundulus_heteroclitus
ENSSHAG00000002871	SRSF5	68	67.699	ENSGMOG00000000595	srsf5b	97	67.568	Gadus_morhua
ENSSHAG00000002871	SRSF5	100	96.992	ENSGALG00000009421	SRSF5	100	96.992	Gallus_gallus
ENSSHAG00000002871	SRSF5	96	72.794	ENSGAFG00000002865	srsf5b	63	82.292	Gambusia_affinis
ENSSHAG00000002871	SRSF5	68	61.538	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
ENSSHAG00000002871	SRSF5	100	98.872	ENSGAGG00000004447	SRSF5	100	98.872	Gopherus_agassizii
ENSSHAG00000002871	SRSF5	100	96.691	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSSHAG00000002871	SRSF5	93	73.333	ENSHBUG00000012462	srsf5b	93	75.000	Haplochromis_burtoni
ENSSHAG00000002871	SRSF5	67	98.883	ENSHGLG00000010147	SRSF5	66	98.883	Heterocephalus_glaber_female
ENSSHAG00000002871	SRSF5	67	98.883	ENSHGLG00100015328	SRSF5	66	98.883	Heterocephalus_glaber_male
ENSSHAG00000002871	SRSF5	100	67.658	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
ENSSHAG00000002871	SRSF5	68	76.042	ENSHCOG00000005592	srsf5b	64	77.660	Hippocampus_comes
ENSSHAG00000002871	SRSF5	67	99.441	ENSSTOG00000020672	SRSF5	66	99.441	Ictidomys_tridecemlineatus
ENSSHAG00000002871	SRSF5	67	99.441	ENSJJAG00000001688	Srsf5	66	99.441	Jaculus_jaculus
ENSSHAG00000002871	SRSF5	68	83.422	ENSKMAG00000020486	srsf5b	84	78.740	Kryptolebias_marmoratus
ENSSHAG00000002871	SRSF5	68	82.199	ENSLBEG00000013647	srsf5b	63	81.818	Labrus_bergylta
ENSSHAG00000002871	SRSF5	67	90.608	ENSLACG00000005874	SRSF5	67	91.160	Latimeria_chalumnae
ENSSHAG00000002871	SRSF5	98	71.642	ENSLOCG00000012438	srsf5b	69	83.243	Lepisosteus_oculatus
ENSSHAG00000002871	SRSF5	67	98.883	ENSLAFG00000005260	SRSF5	66	98.883	Loxodonta_africana
ENSSHAG00000002871	SRSF5	100	96.691	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSSHAG00000002871	SRSF5	100	96.691	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSSHAG00000002871	SRSF5	100	97.059	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSSHAG00000002871	SRSF5	87	75.918	ENSMAMG00000002673	srsf5b	63	81.522	Mastacembelus_armatus
ENSSHAG00000002871	SRSF5	93	72.285	ENSMZEG00005003550	srsf5b	63	82.703	Maylandia_zebra
ENSSHAG00000002871	SRSF5	75	80.500	ENSMGAG00000011835	SRSF5	62	92.143	Meleagris_gallopavo
ENSSHAG00000002871	SRSF5	67	99.441	ENSMAUG00000009544	Srsf5	66	99.441	Mesocricetus_auratus
ENSSHAG00000002871	SRSF5	67	99.441	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSSHAG00000002871	SRSF5	67	99.441	ENSMOCG00000013134	Srsf5	66	99.441	Microtus_ochrogaster
ENSSHAG00000002871	SRSF5	67	82.162	ENSMMOG00000000137	srsf5b	93	61.538	Mola_mola
ENSSHAG00000002871	SRSF5	100	100.000	ENSMODG00000011362	SRSF5	100	100.000	Monodelphis_domestica
ENSSHAG00000002871	SRSF5	68	84.211	ENSMALG00000021875	srsf5b	84	75.194	Monopterus_albus
ENSSHAG00000002871	SRSF5	67	99.441	ENSMUSG00000021134	Srsf5	98	95.556	Mus_musculus
ENSSHAG00000002871	SRSF5	67	99.441	MGP_PahariEiJ_G0029659	Srsf5	67	99.441	Mus_pahari
ENSSHAG00000002871	SRSF5	67	99.441	ENSMPUG00000007458	SRSF5	66	99.441	Mustela_putorius_furo
ENSSHAG00000002871	SRSF5	100	89.247	ENSMLUG00000011939	SRSF5	64	99.441	Myotis_lucifugus
ENSSHAG00000002871	SRSF5	67	99.441	ENSNGAG00000010073	-	66	99.441	Nannospalax_galili
ENSSHAG00000002871	SRSF5	93	72.374	ENSNBRG00000001285	srsf5b	63	81.818	Neolamprologus_brichardi
ENSSHAG00000002871	SRSF5	100	96.691	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSSHAG00000002871	SRSF5	70	100.000	ENSMEUG00000001521	SRSF5	70	100.000	Notamacropus_eugenii
ENSSHAG00000002871	SRSF5	67	99.441	ENSOPRG00000008286	SRSF5	64	99.441	Ochotona_princeps
ENSSHAG00000002871	SRSF5	67	97.207	ENSODEG00000000700	-	68	97.207	Octodon_degus
ENSSHAG00000002871	SRSF5	100	97.761	ENSODEG00000013469	-	100	97.761	Octodon_degus
ENSSHAG00000002871	SRSF5	93	72.285	ENSONIG00000005759	srsf5b	63	82.703	Oreochromis_niloticus
ENSSHAG00000002871	SRSF5	100	89.552	ENSOANG00000013336	SRSF5	67	93.855	Ornithorhynchus_anatinus
ENSSHAG00000002871	SRSF5	100	90.942	ENSOCUG00000009274	SRSF5	65	99.441	Oryctolagus_cuniculus
ENSSHAG00000002871	SRSF5	68	79.058	ENSORLG00000029854	srsf5b	58	80.749	Oryzias_latipes
ENSSHAG00000002871	SRSF5	94	70.522	ENSORLG00015001720	srsf5b	63	82.353	Oryzias_latipes_hsok
ENSSHAG00000002871	SRSF5	67	99.441	ENSOGAG00000015122	SRSF5	66	99.441	Otolemur_garnettii
ENSSHAG00000002871	SRSF5	100	96.691	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSSHAG00000002871	SRSF5	67	99.441	ENSPPRG00000012903	SRSF5	99	100.000	Panthera_pardus
ENSSHAG00000002871	SRSF5	67	99.441	ENSPTIG00000018589	SRSF5	99	100.000	Panthera_tigris_altaica
ENSSHAG00000002871	SRSF5	100	96.691	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
ENSSHAG00000002871	SRSF5	100	97.059	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSSHAG00000002871	SRSF5	100	98.120	ENSPSIG00000012522	SRSF5	100	98.120	Pelodiscus_sinensis
ENSSHAG00000002871	SRSF5	67	99.441	ENSPEMG00000020173	Srsf5	67	99.441	Peromyscus_maniculatus_bairdii
ENSSHAG00000002871	SRSF5	99	52.055	ENSPMAG00000007790	srsf5b	67	62.694	Petromyzon_marinus
ENSSHAG00000002871	SRSF5	100	100.000	ENSPCIG00000011877	SRSF5	100	100.000	Phascolarctos_cinereus
ENSSHAG00000002871	SRSF5	96	71.429	ENSPFOG00000017700	srsf5b	63	84.375	Poecilia_formosa
ENSSHAG00000002871	SRSF5	96	71.168	ENSPLAG00000006480	srsf5b	64	83.938	Poecilia_latipinna
ENSSHAG00000002871	SRSF5	96	71.429	ENSPMEG00000012751	srsf5b	84	75.000	Poecilia_mexicana
ENSSHAG00000002871	SRSF5	96	72.794	ENSPREG00000010381	srsf5b	63	81.771	Poecilia_reticulata
ENSSHAG00000002871	SRSF5	100	96.691	ENSPPYG00000005945	SRSF5	100	96.691	Pongo_abelii
ENSSHAG00000002871	SRSF5	55	99.315	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
ENSSHAG00000002871	SRSF5	67	99.441	ENSPCOG00000014442	SRSF5	90	98.387	Propithecus_coquereli
ENSSHAG00000002871	SRSF5	67	67.598	ENSPVAG00000009828	SRSF5	66	67.598	Pteropus_vampyrus
ENSSHAG00000002871	SRSF5	93	68.077	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
ENSSHAG00000002871	SRSF5	68	82.703	ENSPNAG00000011262	srsf5b	84	78.400	Pygocentrus_nattereri
ENSSHAG00000002871	SRSF5	67	99.441	ENSRNOG00000005513	Srsf5	67	99.441	Rattus_norvegicus
ENSSHAG00000002871	SRSF5	100	96.691	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSSHAG00000002871	SRSF5	100	96.691	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSSHAG00000002871	SRSF5	100	96.691	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSSHAG00000002871	SRSF5	68	78.218	ENSSMAG00000019728	srsf5b	61	80.203	Scophthalmus_maximus
ENSSHAG00000002871	SRSF5	96	72.593	ENSSDUG00000005766	srsf5b	65	83.243	Seriola_dumerili
ENSSHAG00000002871	SRSF5	94	73.764	ENSSLDG00000023255	srsf5b	84	74.219	Seriola_lalandi_dorsalis
ENSSHAG00000002871	SRSF5	100	83.333	ENSSARG00000001059	SRSF5	66	85.475	Sorex_araneus
ENSSHAG00000002871	SRSF5	100	93.818	ENSSPUG00000002464	SRSF5	100	93.818	Sphenodon_punctatus
ENSSHAG00000002871	SRSF5	68	82.540	ENSSPAG00000015325	srsf5b	63	83.243	Stegastes_partitus
ENSSHAG00000002871	SRSF5	67	99.441	ENSSSCG00000032583	SRSF5	66	99.441	Sus_scrofa
ENSSHAG00000002871	SRSF5	100	96.617	ENSTGUG00000011425	SRSF5	100	96.617	Taeniopygia_guttata
ENSSHAG00000002871	SRSF5	68	83.871	ENSTRUG00000017811	srsf5b	59	84.699	Takifugu_rubripes
ENSSHAG00000002871	SRSF5	100	64.748	ENSTNIG00000016411	srsf5b	66	84.699	Tetraodon_nigroviridis
ENSSHAG00000002871	SRSF5	100	86.957	ENSTBEG00000001972	SRSF5	65	97.207	Tupaia_belangeri
ENSSHAG00000002871	SRSF5	99	91.575	ENSTTRG00000003318	SRSF5	65	99.438	Tursiops_truncatus
ENSSHAG00000002871	SRSF5	67	99.441	ENSUAMG00000014184	SRSF5	66	99.441	Ursus_americanus
ENSSHAG00000002871	SRSF5	71	100.000	ENSUMAG00000009827	SRSF5	68	100.000	Ursus_maritimus
ENSSHAG00000002871	SRSF5	67	99.441	ENSVPAG00000006448	SRSF5	66	99.441	Vicugna_pacos
ENSSHAG00000002871	SRSF5	67	99.441	ENSVVUG00000003790	SRSF5	66	99.441	Vulpes_vulpes
ENSSHAG00000002871	SRSF5	94	81.923	ENSXETG00000002211	srsf5	67	92.857	Xenopus_tropicalis
ENSSHAG00000002871	SRSF5	92	73.563	ENSXMAG00000026416	srsf5b	84	75.969	Xiphophorus_maculatus