EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000002955 (Gene tree)
Gene ID: 100914943
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 5034 bases
Position: chrGL867698.1:46585-51618
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003363	NTF2	PF02136.20	9.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003399	-	1680	-	ENSSHAP00000003363	143 (aa)	-	G3VJK8

Gene Model

Click here to download ENSSHAG00000002955's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG
shr03013	RNA transport	KEGG
shr03015	mRNA surveillance pathway	KEGG
shr05164	Influenza A	KEGG

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000002955	-	55	81.013	ENSSHAG00000001265	-	88	81.013
ENSSHAG00000002955	-	94	88.060	ENSSHAG00000010539	-	94	88.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000002955	-	95	84.559	ENSG00000101888	NXT2	98	83.929	Homo_sapiens
ENSSHAG00000002955	-	94	77.206	ENSAPOG00000010308	nxt2	95	77.206	Acanthochromis_polyacanthus
ENSSHAG00000002955	-	94	81.618	ENSAMEG00000017999	NXT2	70	81.618	Ailuropoda_melanoleuca
ENSSHAG00000002955	-	94	76.471	ENSACIG00000015026	nxt2	95	76.471	Amphilophus_citrinellus
ENSSHAG00000002955	-	94	76.471	ENSAOCG00000007411	nxt2	95	76.471	Amphiprion_ocellaris
ENSSHAG00000002955	-	94	76.471	ENSAPEG00000010454	nxt2	95	76.471	Amphiprion_percula
ENSSHAG00000002955	-	94	77.206	ENSATEG00000020315	nxt2	95	77.206	Anabas_testudineus
ENSSHAG00000002955	-	94	80.741	ENSACAG00000012649	NXT2	93	80.741	Anolis_carolinensis
ENSSHAG00000002955	-	94	82.090	ENSANAG00000038165	NXT2	96	81.481	Aotus_nancymaae
ENSSHAG00000002955	-	94	75.735	ENSACLG00000025072	nxt2	95	75.735	Astatotilapia_calliptera
ENSSHAG00000002955	-	95	76.087	ENSAMXG00000031355	nxt2	97	76.087	Astyanax_mexicanus
ENSSHAG00000002955	-	94	82.090	ENSBTAG00000020739	NXT2	94	82.090	Bos_taurus
ENSSHAG00000002955	-	94	85.075	ENSCJAG00000007369	NXT2	68	85.075	Callithrix_jacchus
ENSSHAG00000002955	-	95	80.882	ENSCAFG00000028574	NXT2	68	80.882	Canis_familiaris
ENSSHAG00000002955	-	95	80.882	ENSCAFG00020005721	NXT2	96	80.882	Canis_lupus_dingo
ENSSHAG00000002955	-	94	81.343	ENSCHIG00000000279	NXT2	94	81.343	Capra_hircus
ENSSHAG00000002955	-	95	82.353	ENSTSYG00000001924	NXT2	96	82.353	Carlito_syrichta
ENSSHAG00000002955	-	79	81.416	ENSCPOG00000035559	-	99	81.416	Cavia_porcellus
ENSSHAG00000002955	-	94	85.821	ENSCCAG00000035523	NXT2	68	85.821	Cebus_capucinus
ENSSHAG00000002955	-	95	85.294	ENSCATG00000037402	NXT2	69	85.294	Cercocebus_atys
ENSSHAG00000002955	-	95	80.882	ENSCLAG00000001175	NXT2	69	80.882	Chinchilla_lanigera
ENSSHAG00000002955	-	95	84.559	ENSCSAG00000008842	NXT2	69	84.559	Chlorocebus_sabaeus
ENSSHAG00000002955	-	95	82.353	ENSCPBG00000000629	NXT2	96	82.353	Chrysemys_picta_bellii
ENSSHAG00000002955	-	95	83.824	ENSCANG00000041728	NXT2	69	83.824	Colobus_angolensis_palliatus
ENSSHAG00000002955	-	95	80.147	ENSCGRG00001021749	Nxt2	70	80.147	Cricetulus_griseus_chok1gshd
ENSSHAG00000002955	-	74	76.415	ENSCGRG00000001378	-	98	76.415	Cricetulus_griseus_crigri
ENSSHAG00000002955	-	94	73.529	ENSCSEG00000018710	nxt2	95	73.529	Cynoglossus_semilaevis
ENSSHAG00000002955	-	95	78.261	ENSCVAG00000021187	nxt2	97	78.261	Cyprinodon_variegatus
ENSSHAG00000002955	-	95	73.913	ENSDARG00000061527	nxt2	97	73.913	Danio_rerio
ENSSHAG00000002955	-	95	83.088	ENSDNOG00000039271	NXT2	96	83.088	Dasypus_novemcinctus
ENSSHAG00000002955	-	94	56.296	ENSDNOG00000043813	-	93	56.296	Dasypus_novemcinctus
ENSSHAG00000002955	-	95	76.642	ENSDORG00000010714	Nxt2	98	76.642	Dipodomys_ordii
ENSSHAG00000002955	-	95	74.265	ENSDORG00000013227	-	97	74.265	Dipodomys_ordii
ENSSHAG00000002955	-	95	77.941	ENSETEG00000008002	NXT2	69	77.941	Echinops_telfairi
ENSSHAG00000002955	-	95	80.882	ENSEASG00005019567	NXT2	97	80.180	Equus_asinus_asinus
ENSSHAG00000002955	-	95	81.618	ENSECAG00000015022	NXT2	69	81.618	Equus_caballus
ENSSHAG00000002955	-	92	75.000	ENSEEUG00000005675	-	97	75.000	Erinaceus_europaeus
ENSSHAG00000002955	-	74	78.302	ENSEEUG00000006109	-	64	78.302	Erinaceus_europaeus
ENSSHAG00000002955	-	95	71.739	ENSELUG00000005141	NXT2	97	71.739	Esox_lucius
ENSSHAG00000002955	-	95	80.147	ENSFCAG00000035855	NXT2	69	80.147	Felis_catus
ENSSHAG00000002955	-	95	82.353	ENSFALG00000000178	NXT2	96	82.353	Ficedula_albicollis
ENSSHAG00000002955	-	100	79.720	ENSFDAG00000011646	NXT2	72	79.720	Fukomys_damarensis
ENSSHAG00000002955	-	94	75.735	ENSFHEG00000001982	nxt2	95	75.735	Fundulus_heteroclitus
ENSSHAG00000002955	-	94	77.536	ENSGMOG00000003163	nxt2	95	77.536	Gadus_morhua
ENSSHAG00000002955	-	95	88.235	ENSGALG00000008092	NXT2	96	88.235	Gallus_gallus
ENSSHAG00000002955	-	100	74.483	ENSGAFG00000002714	nxt2	100	75.714	Gambusia_affinis
ENSSHAG00000002955	-	94	75.362	ENSGACG00000018508	nxt2	95	75.362	Gasterosteus_aculeatus
ENSSHAG00000002955	-	95	83.088	ENSGAGG00000017047	NXT2	96	83.088	Gopherus_agassizii
ENSSHAG00000002955	-	97	83.333	ENSGGOG00000013593	NXT2	98	83.333	Gorilla_gorilla
ENSSHAG00000002955	-	94	75.735	ENSHBUG00000002974	nxt2	95	75.735	Haplochromis_burtoni
ENSSHAG00000002955	-	95	83.824	ENSHGLG00000001921	NXT2	99	83.186	Heterocephalus_glaber_female
ENSSHAG00000002955	-	95	82.353	ENSHGLG00100002378	NXT2	99	81.416	Heterocephalus_glaber_male
ENSSHAG00000002955	-	94	75.000	ENSHCOG00000003893	nxt2	96	75.000	Hippocampus_comes
ENSSHAG00000002955	-	98	74.648	ENSIPUG00000000517	nxt2	97	76.087	Ictalurus_punctatus
ENSSHAG00000002955	-	95	82.353	ENSSTOG00000005243	NXT2	96	82.353	Ictidomys_tridecemlineatus
ENSSHAG00000002955	-	92	76.515	ENSJJAG00000000326	-	96	76.515	Jaculus_jaculus
ENSSHAG00000002955	-	94	71.642	ENSJJAG00000023288	-	94	71.642	Jaculus_jaculus
ENSSHAG00000002955	-	94	73.529	ENSKMAG00000016615	nxt2	95	73.529	Kryptolebias_marmoratus
ENSSHAG00000002955	-	95	74.638	ENSLBEG00000014298	nxt2	97	74.638	Labrus_bergylta
ENSSHAG00000002955	-	94	85.075	ENSLACG00000004286	NXT2	95	85.075	Latimeria_chalumnae
ENSSHAG00000002955	-	95	76.087	ENSLOCG00000014519	nxt2	97	76.087	Lepisosteus_oculatus
ENSSHAG00000002955	-	94	82.836	ENSLAFG00000007116	NXT2	81	82.836	Loxodonta_africana
ENSSHAG00000002955	-	95	84.559	ENSMFAG00000004105	NXT2	69	84.559	Macaca_fascicularis
ENSSHAG00000002955	-	95	84.559	ENSMMUG00000013204	NXT2	96	84.559	Macaca_mulatta
ENSSHAG00000002955	-	95	84.559	ENSMNEG00000010392	NXT2	98	83.929	Macaca_nemestrina
ENSSHAG00000002955	-	95	85.294	ENSMLEG00000041108	NXT2	69	85.294	Mandrillus_leucophaeus
ENSSHAG00000002955	-	95	76.812	ENSMAMG00000013603	nxt2	89	76.812	Mastacembelus_armatus
ENSSHAG00000002955	-	94	75.735	ENSMZEG00005007590	nxt2	95	75.735	Maylandia_zebra
ENSSHAG00000002955	-	95	88.235	ENSMGAG00000006597	NXT2	97	88.235	Meleagris_gallopavo
ENSSHAG00000002955	-	95	77.941	ENSMAUG00000000496	Nxt2	96	77.941	Mesocricetus_auratus
ENSSHAG00000002955	-	94	83.582	ENSMICG00000014511	-	68	83.582	Microcebus_murinus
ENSSHAG00000002955	-	94	81.481	ENSMICG00000017900	-	95	81.481	Microcebus_murinus
ENSSHAG00000002955	-	94	70.896	ENSMICG00000014848	-	85	70.896	Microcebus_murinus
ENSSHAG00000002955	-	95	72.794	ENSMOCG00000007176	Nxt2	97	72.794	Microtus_ochrogaster
ENSSHAG00000002955	-	94	70.803	ENSMMOG00000009472	nxt2	96	70.803	Mola_mola
ENSSHAG00000002955	-	95	93.382	ENSMODG00000021343	-	99	93.382	Monodelphis_domestica
ENSSHAG00000002955	-	95	81.618	ENSMODG00000011492	-	95	81.618	Monodelphis_domestica
ENSSHAG00000002955	-	94	77.206	ENSMALG00000006390	nxt2	96	77.206	Monopterus_albus
ENSSHAG00000002955	-	95	80.147	MGP_CAROLIEiJ_G0033463	Nxt2	99	78.761	Mus_caroli
ENSSHAG00000002955	-	95	80.147	ENSMUSG00000042271	Nxt2	99	78.761	Mus_musculus
ENSSHAG00000002955	-	94	82.090	MGP_PahariEiJ_G0032003	Nxt2	97	80.180	Mus_pahari
ENSSHAG00000002955	-	95	80.147	MGP_SPRETEiJ_G0034634	Nxt2	99	78.761	Mus_spretus
ENSSHAG00000002955	-	95	81.618	ENSMPUG00000003973	NXT2	68	81.618	Mustela_putorius_furo
ENSSHAG00000002955	-	94	81.343	ENSMLUG00000000631	NXT2	69	81.343	Myotis_lucifugus
ENSSHAG00000002955	-	95	77.941	ENSNGAG00000015935	Nxt2	96	77.941	Nannospalax_galili
ENSSHAG00000002955	-	94	76.471	ENSNBRG00000019401	nxt2	95	76.471	Neolamprologus_brichardi
ENSSHAG00000002955	-	95	83.088	ENSNLEG00000014331	NXT2	96	83.088	Nomascus_leucogenys
ENSSHAG00000002955	-	95	95.588	ENSMEUG00000000393	-	100	95.588	Notamacropus_eugenii
ENSSHAG00000002955	-	94	86.667	ENSMEUG00000001278	-	96	86.667	Notamacropus_eugenii
ENSSHAG00000002955	-	95	80.882	ENSODEG00000012049	NXT2	97	80.882	Octodon_degus
ENSSHAG00000002955	-	94	76.471	ENSONIG00000017566	nxt2	95	76.471	Oreochromis_niloticus
ENSSHAG00000002955	-	95	86.029	ENSOANG00000011441	NXT2	90	86.029	Ornithorhynchus_anatinus
ENSSHAG00000002955	-	95	80.882	ENSOCUG00000008261	NXT2	69	80.882	Oryctolagus_cuniculus
ENSSHAG00000002955	-	94	75.000	ENSORLG00000022600	nxt2	95	75.000	Oryzias_latipes
ENSSHAG00000002955	-	94	75.000	ENSORLG00020004703	nxt2	95	75.000	Oryzias_latipes_hni
ENSSHAG00000002955	-	94	75.000	ENSORLG00015008149	nxt2	95	75.000	Oryzias_latipes_hsok
ENSSHAG00000002955	-	95	76.087	ENSOMEG00000013420	nxt2	97	76.087	Oryzias_melastigma
ENSSHAG00000002955	-	95	81.618	ENSOGAG00000007890	-	68	81.618	Otolemur_garnettii
ENSSHAG00000002955	-	94	80.597	ENSOARG00000015625	-	83	80.597	Ovis_aries
ENSSHAG00000002955	-	94	80.597	ENSOARG00000018009	-	68	80.597	Ovis_aries
ENSSHAG00000002955	-	94	81.343	ENSOARG00000018574	-	83	81.343	Ovis_aries
ENSSHAG00000002955	-	97	83.333	ENSPPAG00000030159	NXT2	98	83.333	Pan_paniscus
ENSSHAG00000002955	-	94	81.343	ENSPPRG00000024610	NXT2	94	81.343	Panthera_pardus
ENSSHAG00000002955	-	94	73.239	ENSPTIG00000013174	NXT2	97	73.239	Panthera_tigris_altaica
ENSSHAG00000002955	-	97	83.333	ENSPTRG00000039310	NXT2	98	83.333	Pan_troglodytes
ENSSHAG00000002955	-	95	85.294	ENSPANG00000018449	NXT2	96	85.294	Papio_anubis
ENSSHAG00000002955	-	95	74.638	ENSPKIG00000022011	nxt2	97	74.638	Paramormyrops_kingsleyae
ENSSHAG00000002955	-	95	82.353	ENSPSIG00000006737	NXT2	70	82.353	Pelodiscus_sinensis
ENSSHAG00000002955	-	94	76.471	ENSPMGG00000000629	nxt2	95	76.471	Periophthalmus_magnuspinnatus
ENSSHAG00000002955	-	95	95.588	ENSPCIG00000008562	-	88	95.588	Phascolarctos_cinereus
ENSSHAG00000002955	-	94	77.941	ENSPFOG00000007462	nxt2	95	77.941	Poecilia_formosa
ENSSHAG00000002955	-	94	77.941	ENSPLAG00000002080	nxt2	95	77.941	Poecilia_latipinna
ENSSHAG00000002955	-	94	77.941	ENSPMEG00000008382	nxt2	99	76.812	Poecilia_mexicana
ENSSHAG00000002955	-	95	83.088	ENSPPYG00000020625	-	96	83.088	Pongo_abelii
ENSSHAG00000002955	-	99	73.050	ENSPCAG00000008006	NXT2	72	73.050	Procavia_capensis
ENSSHAG00000002955	-	94	83.582	ENSPCOG00000024004	NXT2	94	83.582	Propithecus_coquereli
ENSSHAG00000002955	-	95	79.412	ENSPVAG00000006149	NXT2	71	79.412	Pteropus_vampyrus
ENSSHAG00000002955	-	94	75.735	ENSPNYG00000024009	nxt2	95	75.735	Pundamilia_nyererei
ENSSHAG00000002955	-	95	76.812	ENSPNAG00000025785	nxt2	97	76.812	Pygocentrus_nattereri
ENSSHAG00000002955	-	95	80.147	ENSRNOG00000019168	Nxt2	79	80.147	Rattus_norvegicus
ENSSHAG00000002955	-	97	83.453	ENSRROG00000036216	NXT2	96	84.559	Rhinopithecus_roxellana
ENSSHAG00000002955	-	94	85.075	ENSSBOG00000029386	NXT2	96	84.444	Saimiri_boliviensis_boliviensis
ENSSHAG00000002955	-	95	75.362	ENSSFOG00015009870	nxt2	97	75.362	Scleropages_formosus
ENSSHAG00000002955	-	94	75.735	ENSSMAG00000010366	nxt2	95	75.735	Scophthalmus_maximus
ENSSHAG00000002955	-	95	74.638	ENSSDUG00000011075	nxt2	67	74.638	Seriola_dumerili
ENSSHAG00000002955	-	97	73.571	ENSSLDG00000024416	nxt2	100	73.571	Seriola_lalandi_dorsalis
ENSSHAG00000002955	-	95	74.638	ENSSLDG00000002946	-	97	74.638	Seriola_lalandi_dorsalis
ENSSHAG00000002955	-	97	73.571	ENSSLDG00000001314	nxt2	100	73.571	Seriola_lalandi_dorsalis
ENSSHAG00000002955	-	94	81.343	ENSSARG00000009307	NXT2	69	81.343	Sorex_araneus
ENSSHAG00000002955	-	93	84.211	ENSSPUG00000000372	NXT2	94	84.211	Sphenodon_punctatus
ENSSHAG00000002955	-	94	76.471	ENSSPAG00000015263	nxt2	95	76.471	Stegastes_partitus
ENSSHAG00000002955	-	94	83.582	ENSSSCG00000012581	NXT2	94	83.582	Sus_scrofa
ENSSHAG00000002955	-	98	80.000	ENSTGUG00000004286	NXT2	99	80.000	Taeniopygia_guttata
ENSSHAG00000002955	-	94	77.941	ENSTRUG00000004111	nxt2	97	77.941	Takifugu_rubripes
ENSSHAG00000002955	-	94	75.000	ENSTNIG00000015787	nxt2	98	75.000	Tetraodon_nigroviridis
ENSSHAG00000002955	-	70	76.000	ENSTBEG00000006311	-	99	76.000	Tupaia_belangeri
ENSSHAG00000002955	-	69	77.778	ENSTBEG00000003562	-	98	77.778	Tupaia_belangeri
ENSSHAG00000002955	-	75	81.308	ENSTBEG00000007431	-	54	81.308	Tupaia_belangeri
ENSSHAG00000002955	-	94	77.612	ENSTTRG00000005115	NXT2	68	77.612	Tursiops_truncatus
ENSSHAG00000002955	-	95	83.088	ENSUAMG00000027383	NXT2	99	81.416	Ursus_americanus
ENSSHAG00000002955	-	95	83.088	ENSUMAG00000023095	NXT2	99	81.416	Ursus_maritimus
ENSSHAG00000002955	-	95	80.882	ENSVPAG00000007314	NXT2	69	80.882	Vicugna_pacos
ENSSHAG00000002955	-	97	79.710	ENSVVUG00000010575	NXT2	99	79.710	Vulpes_vulpes
ENSSHAG00000002955	-	95	72.794	ENSXETG00000008528	nxt2	97	72.794	Xenopus_tropicalis
ENSSHAG00000002955	-	95	76.812	ENSXCOG00000011172	nxt2	99	76.812	Xiphophorus_couchianus
ENSSHAG00000002955	-	94	77.941	ENSXMAG00000022277	nxt2	95	77.941	Xiphophorus_maculatus