EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000003091 (Gene tree)
Gene ID: 100928185
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 37555 bases
Position: chrGL841819.1:51133-88687
Accession: 18656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003519	RIO1	PF01163.22	3.6e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003555	RIOK1-201	3304	-	ENSSHAP00000003519	518 (aa)	-	G3VK14

Gene Model

Click here to download ENSSHAG00000003091's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000003091	RIOK1	71	40.253	ENSSHAG00000011854	RIOK3	67	41.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003091	RIOK1	93	77.800	ENSG00000124784	RIOK1	85	80.412	Homo_sapiens
ENSSHAG00000003091	RIOK1	93	80.533	ENSAMEG00000017367	RIOK1	85	80.533	Ailuropoda_melanoleuca
ENSSHAG00000003091	RIOK1	80	75.181	ENSACIG00000003735	riok1	74	76.355	Amphilophus_citrinellus
ENSSHAG00000003091	RIOK1	92	68.842	ENSAOCG00000011818	riok1	87	68.842	Amphiprion_ocellaris
ENSSHAG00000003091	RIOK1	92	69.392	ENSAPEG00000001345	riok1	75	74.939	Amphiprion_percula
ENSSHAG00000003091	RIOK1	76	77.722	ENSATEG00000006594	riok1	91	77.722	Anabas_testudineus
ENSSHAG00000003091	RIOK1	76	85.969	ENSAPLG00000004196	RIOK1	83	85.969	Anas_platyrhynchos
ENSSHAG00000003091	RIOK1	93	77.640	ENSACAG00000000695	RIOK1	85	77.893	Anolis_carolinensis
ENSSHAG00000003091	RIOK1	93	69.835	ENSANAG00000023777	RIOK1	84	67.076	Aotus_nancymaae
ENSSHAG00000003091	RIOK1	92	67.835	ENSACLG00000015799	riok1	72	77.863	Astatotilapia_calliptera
ENSSHAG00000003091	RIOK1	92	70.040	ENSAMXG00000015286	riok1	70	78.484	Astyanax_mexicanus
ENSSHAG00000003091	RIOK1	93	78.528	ENSBTAG00000013821	RIOK1	85	78.980	Bos_taurus
ENSSHAG00000003091	RIOK1	68	53.125	WBGene00019698	riok-1	64	52.841	Caenorhabditis_elegans
ENSSHAG00000003091	RIOK1	93	80.124	ENSCJAG00000042960	RIOK1	85	80.124	Callithrix_jacchus
ENSSHAG00000003091	RIOK1	93	79.918	ENSCAFG00000009563	RIOK1	85	80.658	Canis_familiaris
ENSSHAG00000003091	RIOK1	93	79.918	ENSCAFG00020013233	RIOK1	87	80.658	Canis_lupus_dingo
ENSSHAG00000003091	RIOK1	93	77.597	ENSCHIG00000001534	RIOK1	85	77.664	Capra_hircus
ENSSHAG00000003091	RIOK1	55	86.316	ENSTSYG00000011368	RIOK1	74	88.066	Carlito_syrichta
ENSSHAG00000003091	RIOK1	73	85.000	ENSCAPG00000008489	RIOK1	81	85.000	Cavia_aperea
ENSSHAG00000003091	RIOK1	93	78.234	ENSCPOG00000009882	RIOK1	85	77.096	Cavia_porcellus
ENSSHAG00000003091	RIOK1	93	80.165	ENSCCAG00000024061	RIOK1	85	78.119	Cebus_capucinus
ENSSHAG00000003091	RIOK1	93	81.198	ENSCATG00000001548	RIOK1	96	79.158	Cercocebus_atys
ENSSHAG00000003091	RIOK1	93	79.835	ENSCLAG00000003522	RIOK1	85	78.732	Chinchilla_lanigera
ENSSHAG00000003091	RIOK1	93	80.579	ENSCSAG00000007396	RIOK1	89	77.914	Chlorocebus_sabaeus
ENSSHAG00000003091	RIOK1	61	68.750	ENSCHOG00000001873	RIOK1	56	68.421	Choloepus_hoffmanni
ENSSHAG00000003091	RIOK1	93	79.668	ENSCPBG00000008685	RIOK1	83	79.339	Chrysemys_picta_bellii
ENSSHAG00000003091	RIOK1	93	80.785	ENSCANG00000032919	RIOK1	85	78.732	Colobus_angolensis_palliatus
ENSSHAG00000003091	RIOK1	92	76.987	ENSCGRG00001018868	Riok1	72	82.598	Cricetulus_griseus_chok1gshd
ENSSHAG00000003091	RIOK1	92	76.987	ENSCGRG00000008015	Riok1	72	82.598	Cricetulus_griseus_crigri
ENSSHAG00000003091	RIOK1	73	56.104	ENSCSEG00000015014	riok1	71	56.614	Cynoglossus_semilaevis
ENSSHAG00000003091	RIOK1	50	68.726	ENSCVAG00000011291	riok1	77	72.131	Cyprinodon_variegatus
ENSSHAG00000003091	RIOK1	92	70.894	ENSDARG00000016399	riok1	72	79.345	Danio_rerio
ENSSHAG00000003091	RIOK1	93	80.285	ENSDNOG00000015813	RIOK1	85	80.081	Dasypus_novemcinctus
ENSSHAG00000003091	RIOK1	93	78.702	ENSDORG00000008530	Riok1	85	79.671	Dipodomys_ordii
ENSSHAG00000003091	RIOK1	73	55.643	FBgn0036187	RIOK1	67	53.580	Drosophila_melanogaster
ENSSHAG00000003091	RIOK1	93	78.675	ENSETEG00000020273	RIOK1	85	77.869	Echinops_telfairi
ENSSHAG00000003091	RIOK1	92	63.017	ENSEBUG00000013672	riok1	72	69.363	Eptatretus_burgeri
ENSSHAG00000003091	RIOK1	93	79.466	ENSEASG00005012032	RIOK1	85	80.453	Equus_asinus_asinus
ENSSHAG00000003091	RIOK1	93	79.466	ENSECAG00000009007	RIOK1	85	80.453	Equus_caballus
ENSSHAG00000003091	RIOK1	76	73.980	ENSEEUG00000007123	RIOK1	89	73.980	Erinaceus_europaeus
ENSSHAG00000003091	RIOK1	92	70.539	ENSELUG00000017029	riok1	74	76.039	Esox_lucius
ENSSHAG00000003091	RIOK1	93	79.303	ENSFCAG00000027290	RIOK1	85	79.508	Felis_catus
ENSSHAG00000003091	RIOK1	93	79.132	ENSFALG00000013244	RIOK1	85	79.132	Ficedula_albicollis
ENSSHAG00000003091	RIOK1	93	78.395	ENSFDAG00000019139	RIOK1	85	78.484	Fukomys_damarensis
ENSSHAG00000003091	RIOK1	88	68.202	ENSFHEG00000021419	riok1	85	74.935	Fundulus_heteroclitus
ENSSHAG00000003091	RIOK1	80	70.290	ENSGMOG00000018668	riok1	94	71.111	Gadus_morhua
ENSSHAG00000003091	RIOK1	79	63.107	ENSGAFG00000004091	riok1	70	63.107	Gambusia_affinis
ENSSHAG00000003091	RIOK1	92	65.618	ENSGACG00000002496	riok1	80	75.676	Gasterosteus_aculeatus
ENSSHAG00000003091	RIOK1	90	78.925	ENSGAGG00000002262	RIOK1	98	78.587	Gopherus_agassizii
ENSSHAG00000003091	RIOK1	78	75.728	ENSGGOG00000011037	RIOK1	80	78.818	Gorilla_gorilla
ENSSHAG00000003091	RIOK1	93	77.160	ENSHGLG00000008699	RIOK1	85	77.459	Heterocephalus_glaber_female
ENSSHAG00000003091	RIOK1	93	77.366	ENSHGLG00100008188	RIOK1	85	77.664	Heterocephalus_glaber_male
ENSSHAG00000003091	RIOK1	80	72.837	ENSHCOG00000013275	riok1	73	75.127	Hippocampus_comes
ENSSHAG00000003091	RIOK1	92	71.811	ENSIPUG00000003290	riok1	72	78.261	Ictalurus_punctatus
ENSSHAG00000003091	RIOK1	93	77.844	ENSSTOG00000009289	RIOK1	85	80.081	Ictidomys_tridecemlineatus
ENSSHAG00000003091	RIOK1	93	79.339	ENSJJAG00000015152	Riok1	85	73.904	Jaculus_jaculus
ENSSHAG00000003091	RIOK1	75	74.936	ENSKMAG00000019378	riok1	99	74.936	Kryptolebias_marmoratus
ENSSHAG00000003091	RIOK1	80	75.362	ENSLBEG00000016650	riok1	72	76.167	Labrus_bergylta
ENSSHAG00000003091	RIOK1	93	65.918	ENSLACG00000000300	RIOK1	71	71.569	Latimeria_chalumnae
ENSSHAG00000003091	RIOK1	92	73.278	ENSLOCG00000011728	riok1	70	81.566	Lepisosteus_oculatus
ENSSHAG00000003091	RIOK1	93	80.124	ENSLAFG00000005504	RIOK1	85	78.675	Loxodonta_africana
ENSSHAG00000003091	RIOK1	93	81.405	ENSMFAG00000029990	RIOK1	85	78.732	Macaca_fascicularis
ENSSHAG00000003091	RIOK1	93	81.198	ENSMMUG00000015577	RIOK1	85	78.528	Macaca_mulatta
ENSSHAG00000003091	RIOK1	90	80.043	ENSMNEG00000034396	RIOK1	99	80.043	Macaca_nemestrina
ENSSHAG00000003091	RIOK1	93	80.992	ENSMLEG00000026327	RIOK1	85	78.323	Mandrillus_leucophaeus
ENSSHAG00000003091	RIOK1	91	70.551	ENSMAMG00000019557	riok1	74	77.150	Mastacembelus_armatus
ENSSHAG00000003091	RIOK1	92	67.556	ENSMZEG00005019482	riok1	72	77.863	Maylandia_zebra
ENSSHAG00000003091	RIOK1	93	78.054	ENSMGAG00000003816	RIOK1	85	78.054	Meleagris_gallopavo
ENSSHAG00000003091	RIOK1	92	77.615	ENSMAUG00000012751	Riok1	72	83.333	Mesocricetus_auratus
ENSSHAG00000003091	RIOK1	93	79.430	ENSMICG00000044301	RIOK1	72	78.776	Microcebus_murinus
ENSSHAG00000003091	RIOK1	92	75.840	ENSMOCG00000017032	Riok1	72	81.373	Microtus_ochrogaster
ENSSHAG00000003091	RIOK1	79	67.735	ENSMMOG00000020598	riok1	80	68.192	Mola_mola
ENSSHAG00000003091	RIOK1	93	90.535	ENSMODG00000009964	RIOK1	85	91.564	Monodelphis_domestica
ENSSHAG00000003091	RIOK1	82	68.868	ENSMALG00000019982	riok1	82	72.589	Monopterus_albus
ENSSHAG00000003091	RIOK1	92	77.311	MGP_CAROLIEiJ_G0018439	Riok1	72	82.598	Mus_caroli
ENSSHAG00000003091	RIOK1	92	76.681	ENSMUSG00000021428	Riok1	99	71.220	Mus_musculus
ENSSHAG00000003091	RIOK1	92	76.050	MGP_PahariEiJ_G0019507	Riok1	72	82.353	Mus_pahari
ENSSHAG00000003091	RIOK1	92	76.261	MGP_SPRETEiJ_G0019319	Riok1	72	82.353	Mus_spretus
ENSSHAG00000003091	RIOK1	93	79.508	ENSMPUG00000000570	RIOK1	85	80.738	Mustela_putorius_furo
ENSSHAG00000003091	RIOK1	93	80.123	ENSMLUG00000015312	RIOK1	85	80.533	Myotis_lucifugus
ENSSHAG00000003091	RIOK1	93	80.745	ENSNGAG00000021734	Riok1	85	80.745	Nannospalax_galili
ENSSHAG00000003091	RIOK1	76	77.863	ENSNBRG00000017489	riok1	75	77.863	Neolamprologus_brichardi
ENSSHAG00000003091	RIOK1	97	71.262	ENSNLEG00000011621	RIOK1	92	73.477	Nomascus_leucogenys
ENSSHAG00000003091	RIOK1	76	60.459	ENSMEUG00000006679	-	69	60.459	Notamacropus_eugenii
ENSSHAG00000003091	RIOK1	72	80.161	ENSOPRG00000009524	RIOK1	100	80.161	Ochotona_princeps
ENSSHAG00000003091	RIOK1	77	65.261	ENSODEG00000005663	RIOK1	100	66.998	Octodon_degus
ENSSHAG00000003091	RIOK1	91	69.215	ENSONIG00000014010	riok1	71	77.307	Oreochromis_niloticus
ENSSHAG00000003091	RIOK1	73	90.000	ENSOANG00000012553	RIOK1	81	90.000	Ornithorhynchus_anatinus
ENSSHAG00000003091	RIOK1	93	78.099	ENSOCUG00000011824	RIOK1	85	78.189	Oryctolagus_cuniculus
ENSSHAG00000003091	RIOK1	91	69.851	ENSORLG00000008221	riok1	75	75.676	Oryzias_latipes
ENSSHAG00000003091	RIOK1	91	67.653	ENSORLG00020013838	riok1	51	74.811	Oryzias_latipes_hni
ENSSHAG00000003091	RIOK1	91	69.556	ENSORLG00015009817	riok1	72	77.330	Oryzias_latipes_hsok
ENSSHAG00000003091	RIOK1	91	69.556	ENSOMEG00000002758	riok1	66	77.078	Oryzias_melastigma
ENSSHAG00000003091	RIOK1	97	72.549	ENSOGAG00000010192	RIOK1	90	72.745	Otolemur_garnettii
ENSSHAG00000003091	RIOK1	93	79.794	ENSOARG00000017747	RIOK1	85	78.074	Ovis_aries
ENSSHAG00000003091	RIOK1	93	69.512	ENSPPAG00000016349	RIOK1	76	87.243	Pan_paniscus
ENSSHAG00000003091	RIOK1	93	79.303	ENSPPRG00000001932	RIOK1	85	79.508	Panthera_pardus
ENSSHAG00000003091	RIOK1	93	79.508	ENSPTIG00000018545	RIOK1	85	79.713	Panthera_tigris_altaica
ENSSHAG00000003091	RIOK1	93	77.597	ENSPTRG00000017700	RIOK1	85	80.206	Pan_troglodytes
ENSSHAG00000003091	RIOK1	93	81.198	ENSPANG00000016522	RIOK1	85	78.528	Papio_anubis
ENSSHAG00000003091	RIOK1	92	70.165	ENSPKIG00000006442	riok1	71	80.856	Paramormyrops_kingsleyae
ENSSHAG00000003091	RIOK1	93	80.124	ENSPSIG00000006488	RIOK1	84	80.124	Pelodiscus_sinensis
ENSSHAG00000003091	RIOK1	80	70.773	ENSPMGG00000017807	riok1	96	68.232	Periophthalmus_magnuspinnatus
ENSSHAG00000003091	RIOK1	79	84.314	ENSPEMG00000017844	Riok1	72	84.314	Peromyscus_maniculatus_bairdii
ENSSHAG00000003091	RIOK1	77	69.756	ENSPMAG00000006351	riok1	76	79.012	Petromyzon_marinus
ENSSHAG00000003091	RIOK1	93	92.577	ENSPCIG00000012653	RIOK1	86	92.165	Phascolarctos_cinereus
ENSSHAG00000003091	RIOK1	91	64.389	ENSPFOG00000011532	riok1	75	72.030	Poecilia_formosa
ENSSHAG00000003091	RIOK1	91	64.389	ENSPLAG00000001341	riok1	75	72.030	Poecilia_latipinna
ENSSHAG00000003091	RIOK1	91	64.182	ENSPMEG00000007710	riok1	77	71.782	Poecilia_mexicana
ENSSHAG00000003091	RIOK1	91	65.539	ENSPREG00000009237	riok1	74	72.727	Poecilia_reticulata
ENSSHAG00000003091	RIOK1	93	77.846	ENSPPYG00000016207	RIOK1	87	77.200	Pongo_abelii
ENSSHAG00000003091	RIOK1	93	66.667	ENSPCAG00000007892	RIOK1	85	66.874	Procavia_capensis
ENSSHAG00000003091	RIOK1	93	80.533	ENSPVAG00000014091	RIOK1	85	80.533	Pteropus_vampyrus
ENSSHAG00000003091	RIOK1	92	71.992	ENSPNAG00000015435	riok1	70	79.849	Pygocentrus_nattereri
ENSSHAG00000003091	RIOK1	92	76.778	ENSRNOG00000014049	Riok1	81	83.684	Rattus_norvegicus
ENSSHAG00000003091	RIOK1	93	80.579	ENSRBIG00000036685	RIOK1	85	78.323	Rhinopithecus_bieti
ENSSHAG00000003091	RIOK1	93	80.785	ENSRROG00000036611	RIOK1	85	78.528	Rhinopithecus_roxellana
ENSSHAG00000003091	RIOK1	62	41.667	YOR119C	RIO1	71	41.667	Saccharomyces_cerevisiae
ENSSHAG00000003091	RIOK1	93	78.819	ENSSBOG00000012588	RIOK1	89	80.619	Saimiri_boliviensis_boliviensis
ENSSHAG00000003091	RIOK1	77	80.605	ENSSFOG00015001035	riok1	71	80.605	Scleropages_formosus
ENSSHAG00000003091	RIOK1	92	69.038	ENSSLDG00000017657	riok1	73	77.778	Seriola_lalandi_dorsalis
ENSSHAG00000003091	RIOK1	78	71.852	ENSSPUG00000007624	RIOK1	71	71.852	Sphenodon_punctatus
ENSSHAG00000003091	RIOK1	92	70.526	ENSSPAG00000022710	riok1	76	76.413	Stegastes_partitus
ENSSHAG00000003091	RIOK1	93	77.366	ENSSSCG00000001024	RIOK1	85	77.366	Sus_scrofa
ENSSHAG00000003091	RIOK1	93	77.254	ENSTGUG00000002331	RIOK1	85	79.381	Taeniopygia_guttata
ENSSHAG00000003091	RIOK1	82	59.770	ENSTRUG00000002854	riok1	96	62.374	Takifugu_rubripes
ENSSHAG00000003091	RIOK1	93	62.372	ENSTNIG00000003078	riok1	71	69.750	Tetraodon_nigroviridis
ENSSHAG00000003091	RIOK1	93	75.983	ENSTBEG00000016730	RIOK1	85	75.983	Tupaia_belangeri
ENSSHAG00000003091	RIOK1	75	85.934	ENSTTRG00000017335	RIOK1	81	85.934	Tursiops_truncatus
ENSSHAG00000003091	RIOK1	93	79.513	ENSUAMG00000003721	RIOK1	87	79.919	Ursus_americanus
ENSSHAG00000003091	RIOK1	93	80.533	ENSUMAG00000018461	RIOK1	85	80.533	Ursus_maritimus
ENSSHAG00000003091	RIOK1	93	80.123	ENSVVUG00000005018	RIOK1	85	80.864	Vulpes_vulpes
ENSSHAG00000003091	RIOK1	80	75.845	ENSXETG00000020436	riok1	72	77.556	Xenopus_tropicalis
ENSSHAG00000003091	RIOK1	76	68.112	ENSXCOG00000000245	riok1	84	68.112	Xiphophorus_couchianus
ENSSHAG00000003091	RIOK1	92	65.417	ENSXMAG00000014572	riok1	78	72.277	Xiphophorus_maculatus