EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000003135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 3174 bases
Position: chrGL867603.1:52605-55778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003569	Suf	PF05843.14	5.8e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003605	-	2688	-	ENSSHAP00000003569	720 (aa)	-	G3VK64

Gene Model

Click here to download ENSSHAG00000003135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000003135	-	99	86.192	ENSSHAG00000018128	-	100	86.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003135	-	99	85.495	ENSG00000176102	CSTF3	100	85.495	Homo_sapiens
ENSSHAG00000003135	-	99	81.476	ENSAPOG00000014054	cstf3	100	81.476	Acanthochromis_polyacanthus
ENSSHAG00000003135	-	98	85.997	ENSAMEG00000007187	CSTF3	98	85.997	Ailuropoda_melanoleuca
ENSSHAG00000003135	-	86	76.640	ENSACIG00000005539	cstf3	100	76.640	Amphilophus_citrinellus
ENSSHAG00000003135	-	99	81.476	ENSAOCG00000010930	cstf3	100	81.476	Amphiprion_ocellaris
ENSSHAG00000003135	-	99	81.476	ENSAPEG00000007903	cstf3	100	81.476	Amphiprion_percula
ENSSHAG00000003135	-	99	81.755	ENSATEG00000000190	cstf3	100	81.755	Anabas_testudineus
ENSSHAG00000003135	-	98	85.856	ENSAPLG00000007217	CSTF3	99	85.856	Anas_platyrhynchos
ENSSHAG00000003135	-	98	85.493	ENSACAG00000002823	CSTF3	99	85.493	Anolis_carolinensis
ENSSHAG00000003135	-	99	85.495	ENSANAG00000020699	CSTF3	100	85.760	Aotus_nancymaae
ENSSHAG00000003135	-	98	82.128	ENSACLG00000007820	cstf3	100	81.198	Astatotilapia_calliptera
ENSSHAG00000003135	-	99	81.198	ENSAMXG00000014198	cstf3	100	81.616	Astyanax_mexicanus
ENSSHAG00000003135	-	99	85.495	ENSBTAG00000008617	CSTF3	100	85.608	Bos_taurus
ENSSHAG00000003135	-	88	49.923	WBGene00006307	suf-1	88	49.923	Caenorhabditis_elegans
ENSSHAG00000003135	-	99	85.495	ENSCJAG00000005533	CSTF3	100	85.760	Callithrix_jacchus
ENSSHAG00000003135	-	99	85.356	ENSCAFG00000007264	CSTF3	100	85.356	Canis_familiaris
ENSSHAG00000003135	-	98	86.139	ENSCAFG00020002715	CSTF3	99	85.290	Canis_lupus_dingo
ENSSHAG00000003135	-	97	85.206	ENSCHIG00000016418	CSTF3	100	85.760	Capra_hircus
ENSSHAG00000003135	-	98	85.734	ENSTSYG00000000451	CSTF3	99	90.423	Carlito_syrichta
ENSSHAG00000003135	-	83	84.597	ENSCAPG00000010958	CSTF3	98	84.597	Cavia_aperea
ENSSHAG00000003135	-	99	85.554	ENSCPOG00000005545	CSTF3	100	85.554	Cavia_porcellus
ENSSHAG00000003135	-	99	85.495	ENSCCAG00000024790	CSTF3	96	90.055	Cebus_capucinus
ENSSHAG00000003135	-	99	85.495	ENSCATG00000007080	CSTF3	100	85.760	Cercocebus_atys
ENSSHAG00000003135	-	99	85.495	ENSCLAG00000016179	CSTF3	100	85.495	Chinchilla_lanigera
ENSSHAG00000003135	-	77	90.943	ENSCHOG00000002497	CSTF3	79	90.943	Choloepus_hoffmanni
ENSSHAG00000003135	-	99	84.958	ENSCPBG00000006753	CSTF3	100	84.958	Chrysemys_picta_bellii
ENSSHAG00000003135	-	98	60.224	ENSCING00000006401	-	98	60.224	Ciona_intestinalis
ENSSHAG00000003135	-	98	59.944	ENSCSAVG00000004851	-	100	59.944	Ciona_savignyi
ENSSHAG00000003135	-	99	85.495	ENSCANG00000035468	CSTF3	100	85.760	Colobus_angolensis_palliatus
ENSSHAG00000003135	-	99	85.077	ENSCGRG00001014773	Cstf3	100	85.077	Cricetulus_griseus_chok1gshd
ENSSHAG00000003135	-	99	85.077	ENSCGRG00000004142	Cstf3	100	85.077	Cricetulus_griseus_crigri
ENSSHAG00000003135	-	99	82.008	ENSCSEG00000014283	cstf3	100	82.008	Cynoglossus_semilaevis
ENSSHAG00000003135	-	99	81.337	ENSCVAG00000019739	cstf3	100	81.337	Cyprinodon_variegatus
ENSSHAG00000003135	-	99	81.590	ENSDARG00000018904	cstf3	100	81.590	Danio_rerio
ENSSHAG00000003135	-	98	85.714	ENSDNOG00000007366	CSTF3	99	85.714	Dasypus_novemcinctus
ENSSHAG00000003135	-	98	79.577	ENSDORG00000005898	Cstf3	99	79.577	Dipodomys_ordii
ENSSHAG00000003135	-	99	55.846	FBgn0003559	su(f)	99	55.846	Drosophila_melanogaster
ENSSHAG00000003135	-	89	80.062	ENSETEG00000017097	CSTF3	90	80.062	Echinops_telfairi
ENSSHAG00000003135	-	84	69.154	ENSEBUG00000015459	cstf3	96	69.154	Eptatretus_burgeri
ENSSHAG00000003135	-	98	85.431	ENSEASG00005019884	CSTF3	96	90.200	Equus_asinus_asinus
ENSSHAG00000003135	-	98	85.431	ENSECAG00000023338	CSTF3	96	90.200	Equus_caballus
ENSSHAG00000003135	-	99	80.474	ENSEEUG00000015167	CSTF3	100	80.474	Erinaceus_europaeus
ENSSHAG00000003135	-	99	80.919	ENSELUG00000023393	cstf3	100	80.919	Esox_lucius
ENSSHAG00000003135	-	99	85.216	ENSFCAG00000030711	CSTF3	100	85.216	Felis_catus
ENSSHAG00000003135	-	92	87.801	ENSFALG00000010764	CSTF3	100	84.178	Ficedula_albicollis
ENSSHAG00000003135	-	99	85.356	ENSFDAG00000012082	CSTF3	100	85.356	Fukomys_damarensis
ENSSHAG00000003135	-	99	81.337	ENSFHEG00000020623	cstf3	100	81.337	Fundulus_heteroclitus
ENSSHAG00000003135	-	99	80.668	ENSGMOG00000012275	cstf3	100	80.668	Gadus_morhua
ENSSHAG00000003135	-	99	84.958	ENSGALG00000011685	CSTF3	100	84.958	Gallus_gallus
ENSSHAG00000003135	-	99	81.337	ENSGAFG00000002181	cstf3	100	81.337	Gambusia_affinis
ENSSHAG00000003135	-	99	81.476	ENSGACG00000015997	cstf3	100	81.476	Gasterosteus_aculeatus
ENSSHAG00000003135	-	99	84.958	ENSGAGG00000006200	CSTF3	100	84.958	Gopherus_agassizii
ENSSHAG00000003135	-	98	81.188	ENSGGOG00000026591	CSTF3	96	87.082	Gorilla_gorilla
ENSSHAG00000003135	-	98	82.128	ENSHBUG00000016656	cstf3	100	81.198	Haplochromis_burtoni
ENSSHAG00000003135	-	99	85.635	ENSHGLG00000017834	CSTF3	100	85.635	Heterocephalus_glaber_female
ENSSHAG00000003135	-	99	85.635	ENSHGLG00100018042	CSTF3	100	85.635	Heterocephalus_glaber_male
ENSSHAG00000003135	-	98	80.737	ENSHCOG00000015218	cstf3	100	79.944	Hippocampus_comes
ENSSHAG00000003135	-	99	80.866	ENSIPUG00000013170	CSTF3	100	81.013	Ictalurus_punctatus
ENSSHAG00000003135	-	99	85.495	ENSSTOG00000013306	CSTF3	100	85.495	Ictidomys_tridecemlineatus
ENSSHAG00000003135	-	88	90.773	ENSJJAG00000018430	Cstf3	97	90.773	Jaculus_jaculus
ENSSHAG00000003135	-	99	80.780	ENSKMAG00000010916	cstf3	100	80.780	Kryptolebias_marmoratus
ENSSHAG00000003135	-	99	81.337	ENSLBEG00000002306	cstf3	100	81.337	Labrus_bergylta
ENSSHAG00000003135	-	99	82.566	ENSLACG00000017296	CSTF3	100	82.566	Latimeria_chalumnae
ENSSHAG00000003135	-	99	82.148	ENSLOCG00000004415	cstf3	100	82.148	Lepisosteus_oculatus
ENSSHAG00000003135	-	99	85.216	ENSLAFG00000008712	CSTF3	100	85.216	Loxodonta_africana
ENSSHAG00000003135	-	99	85.495	ENSMFAG00000029516	CSTF3	100	85.760	Macaca_fascicularis
ENSSHAG00000003135	-	99	85.495	ENSMMUG00000002542	CSTF3	100	85.495	Macaca_mulatta
ENSSHAG00000003135	-	99	85.495	ENSMNEG00000021807	CSTF3	100	85.760	Macaca_nemestrina
ENSSHAG00000003135	-	99	85.495	ENSMLEG00000039594	CSTF3	97	89.310	Mandrillus_leucophaeus
ENSSHAG00000003135	-	99	81.337	ENSMAMG00000020423	cstf3	100	81.337	Mastacembelus_armatus
ENSSHAG00000003135	-	98	82.128	ENSMZEG00005012082	cstf3	100	81.198	Maylandia_zebra
ENSSHAG00000003135	-	99	84.958	ENSMGAG00000001383	CSTF3	100	84.958	Meleagris_gallopavo
ENSSHAG00000003135	-	99	84.937	ENSMAUG00000002487	Cstf3	100	84.937	Mesocricetus_auratus
ENSSHAG00000003135	-	99	85.216	ENSMICG00000004784	CSTF3	100	85.440	Microcebus_murinus
ENSSHAG00000003135	-	99	85.077	ENSMOCG00000017583	Cstf3	100	85.077	Microtus_ochrogaster
ENSSHAG00000003135	-	98	81.461	ENSMMOG00000016026	cstf3	95	81.461	Mola_mola
ENSSHAG00000003135	-	99	86.053	ENSMODG00000009745	-	100	86.053	Monodelphis_domestica
ENSSHAG00000003135	-	99	78.661	ENSMODG00000025205	-	100	78.661	Monodelphis_domestica
ENSSHAG00000003135	-	99	80.919	ENSMALG00000012050	cstf3	100	80.919	Monopterus_albus
ENSSHAG00000003135	-	99	85.077	MGP_CAROLIEiJ_G0024026	Cstf3	100	85.077	Mus_caroli
ENSSHAG00000003135	-	99	85.077	ENSMUSG00000027176	Cstf3	100	85.077	Mus_musculus
ENSSHAG00000003135	-	99	85.077	MGP_PahariEiJ_G0025464	Cstf3	100	85.077	Mus_pahari
ENSSHAG00000003135	-	99	85.077	MGP_SPRETEiJ_G0024939	Cstf3	100	85.077	Mus_spretus
ENSSHAG00000003135	-	99	85.216	ENSMPUG00000011457	CSTF3	100	85.216	Mustela_putorius_furo
ENSSHAG00000003135	-	98	85.856	ENSMLUG00000003073	-	99	85.856	Myotis_lucifugus
ENSSHAG00000003135	-	99	82.985	ENSMLUG00000026022	-	100	82.985	Myotis_lucifugus
ENSSHAG00000003135	-	99	84.937	ENSNGAG00000010677	Cstf3	100	84.937	Nannospalax_galili
ENSSHAG00000003135	-	86	81.600	ENSNBRG00000007345	cstf3	100	81.600	Neolamprologus_brichardi
ENSSHAG00000003135	-	99	85.495	ENSNLEG00000017901	CSTF3	97	89.087	Nomascus_leucogenys
ENSSHAG00000003135	-	72	83.939	ENSMEUG00000005640	-	100	83.939	Notamacropus_eugenii
ENSSHAG00000003135	-	67	84.000	ENSOPRG00000000199	-	67	84.000	Ochotona_princeps
ENSSHAG00000003135	-	99	85.216	ENSODEG00000016737	-	100	85.216	Octodon_degus
ENSSHAG00000003135	-	86	76.737	ENSODEG00000006311	-	95	76.737	Octodon_degus
ENSSHAG00000003135	-	98	82.128	ENSONIG00000005563	cstf3	100	81.198	Oreochromis_niloticus
ENSSHAG00000003135	-	90	84.308	ENSOANG00000015140	CSTF3	100	84.308	Ornithorhynchus_anatinus
ENSSHAG00000003135	-	99	85.077	ENSOCUG00000015417	CSTF3	100	85.077	Oryctolagus_cuniculus
ENSSHAG00000003135	-	99	81.311	ENSORLG00000009762	cstf3	100	81.311	Oryzias_latipes
ENSSHAG00000003135	-	99	81.311	ENSORLG00020005540	cstf3	100	81.311	Oryzias_latipes_hni
ENSSHAG00000003135	-	99	81.172	ENSORLG00015003551	cstf3	100	81.172	Oryzias_latipes_hsok
ENSSHAG00000003135	-	99	80.893	ENSOMEG00000003848	cstf3	100	80.893	Oryzias_melastigma
ENSSHAG00000003135	-	99	84.861	ENSOGAG00000010229	CSTF3	100	84.861	Otolemur_garnettii
ENSSHAG00000003135	-	89	85.226	ENSOARG00000017271	CSTF3	99	85.226	Ovis_aries
ENSSHAG00000003135	-	98	83.593	ENSPPAG00000027358	CSTF3	99	83.593	Pan_paniscus
ENSSHAG00000003135	-	99	85.216	ENSPPRG00000016852	CSTF3	100	85.216	Panthera_pardus
ENSSHAG00000003135	-	99	85.216	ENSPTIG00000008716	CSTF3	100	85.216	Panthera_tigris_altaica
ENSSHAG00000003135	-	99	85.495	ENSPTRG00000003485	CSTF3	100	85.495	Pan_troglodytes
ENSSHAG00000003135	-	99	85.495	ENSPANG00000013722	CSTF3	97	89.310	Papio_anubis
ENSSHAG00000003135	-	99	82.148	ENSPKIG00000023648	cstf3	100	82.148	Paramormyrops_kingsleyae
ENSSHAG00000003135	-	99	84.680	ENSPSIG00000009173	CSTF3	100	84.680	Pelodiscus_sinensis
ENSSHAG00000003135	-	76	86.654	ENSPMGG00000000164	cstf3	99	86.654	Periophthalmus_magnuspinnatus
ENSSHAG00000003135	-	99	84.937	ENSPEMG00000011481	Cstf3	100	84.937	Peromyscus_maniculatus_bairdii
ENSSHAG00000003135	-	99	74.234	ENSPMAG00000007282	cstf3	99	74.583	Petromyzon_marinus
ENSSHAG00000003135	-	99	78.661	ENSPCIG00000030419	-	90	78.661	Phascolarctos_cinereus
ENSSHAG00000003135	-	98	84.062	ENSPCIG00000026406	-	100	86.720	Phascolarctos_cinereus
ENSSHAG00000003135	-	99	81.476	ENSPFOG00000017239	cstf3	100	81.476	Poecilia_formosa
ENSSHAG00000003135	-	99	81.476	ENSPLAG00000009456	cstf3	100	81.476	Poecilia_latipinna
ENSSHAG00000003135	-	99	81.476	ENSPMEG00000010320	cstf3	100	81.476	Poecilia_mexicana
ENSSHAG00000003135	-	99	81.476	ENSPREG00000013549	cstf3	100	81.476	Poecilia_reticulata
ENSSHAG00000003135	-	99	85.495	ENSPPYG00000003375	CSTF3	100	85.495	Pongo_abelii
ENSSHAG00000003135	-	79	75.604	ENSPCAG00000008025	-	80	75.604	Procavia_capensis
ENSSHAG00000003135	-	99	81.172	ENSPCOG00000014417	CSTF3	100	81.172	Propithecus_coquereli
ENSSHAG00000003135	-	99	81.450	ENSPVAG00000002350	CSTF3	100	81.450	Pteropus_vampyrus
ENSSHAG00000003135	-	98	82.128	ENSPNYG00000018259	cstf3	100	81.198	Pundamilia_nyererei
ENSSHAG00000003135	-	99	82.148	ENSPNAG00000020182	cstf3	100	82.148	Pygocentrus_nattereri
ENSSHAG00000003135	-	86	85.280	ENSRNOG00000012089	Cstf3	100	85.280	Rattus_norvegicus
ENSSHAG00000003135	-	98	85.431	ENSRBIG00000044258	CSTF3	100	85.760	Rhinopithecus_bieti
ENSSHAG00000003135	-	99	85.495	ENSRROG00000043450	CSTF3	100	85.760	Rhinopithecus_roxellana
ENSSHAG00000003135	-	99	85.495	ENSSBOG00000024764	CSTF3	98	90.423	Saimiri_boliviensis_boliviensis
ENSSHAG00000003135	-	99	83.124	ENSSFOG00015022133	cstf3	100	83.124	Scleropages_formosus
ENSSHAG00000003135	-	99	81.476	ENSSMAG00000002197	cstf3	96	85.714	Scophthalmus_maximus
ENSSHAG00000003135	-	99	81.476	ENSSDUG00000020426	cstf3	100	81.476	Seriola_dumerili
ENSSHAG00000003135	-	99	81.476	ENSSLDG00000025649	cstf3	100	81.476	Seriola_lalandi_dorsalis
ENSSHAG00000003135	-	99	85.077	ENSSARG00000000391	CSTF3	100	85.077	Sorex_araneus
ENSSHAG00000003135	-	96	85.384	ENSSPUG00000010546	CSTF3	100	85.384	Sphenodon_punctatus
ENSSHAG00000003135	-	99	81.476	ENSSPAG00000004958	cstf3	100	81.476	Stegastes_partitus
ENSSHAG00000003135	-	99	84.916	ENSSSCG00000040954	CSTF3	100	84.916	Sus_scrofa
ENSSHAG00000003135	-	98	85.452	ENSTGUG00000005010	CSTF3	100	85.452	Taeniopygia_guttata
ENSSHAG00000003135	-	99	80.780	ENSTRUG00000004959	cstf3	100	80.780	Takifugu_rubripes
ENSSHAG00000003135	-	98	81.180	ENSTNIG00000013811	cstf3	99	81.180	Tetraodon_nigroviridis
ENSSHAG00000003135	-	89	82.710	ENSTBEG00000001544	CSTF3	90	82.710	Tupaia_belangeri
ENSSHAG00000003135	-	99	82.402	ENSTTRG00000016366	CSTF3	100	82.402	Tursiops_truncatus
ENSSHAG00000003135	-	98	85.856	ENSUMAG00000018971	CSTF3	100	85.440	Ursus_maritimus
ENSSHAG00000003135	-	99	85.356	ENSVPAG00000007800	CSTF3	100	85.356	Vicugna_pacos
ENSSHAG00000003135	-	98	86.139	ENSVVUG00000014938	CSTF3	100	85.760	Vulpes_vulpes
ENSSHAG00000003135	-	88	69.375	ENSXETG00000021399	cstf3	100	70.388	Xenopus_tropicalis
ENSSHAG00000003135	-	66	41.788	ENSXETG00000017946	-	99	41.788	Xenopus_tropicalis
ENSSHAG00000003135	-	86	81.600	ENSXCOG00000011741	cstf3	100	81.600	Xiphophorus_couchianus
ENSSHAG00000003135	-	99	81.476	ENSXMAG00000009545	cstf3	100	81.476	Xiphophorus_maculatus