EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000003139 (Gene tree)
Gene ID: 100930611
Gene Symbol: SYMPK
Alias: SPK|SYM
Full Name: symplekin
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 17907 bases
Position: chrGL849934.1:53074-70980
Accession: 22935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003574	Symplekin_C	PF12295.8	1.3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003610	SYMPK-201	3520	-	ENSSHAP00000003574	1150 (aa)	-	G3VK69

Gene Model

Click here to download ENSSHAG00000003139's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG
shr04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003139	SYMPK	99	91.154	ENSG00000125755	SYMPK	99	96.491	Homo_sapiens
ENSSHAG00000003139	SYMPK	94	74.862	ENSAPOG00000015934	sympk	98	72.490	Acanthochromis_polyacanthus
ENSSHAG00000003139	SYMPK	99	91.154	ENSAMEG00000000680	SYMPK	90	91.154	Ailuropoda_melanoleuca
ENSSHAG00000003139	SYMPK	95	73.032	ENSACIG00000006357	sympk	92	73.032	Amphilophus_citrinellus
ENSSHAG00000003139	SYMPK	94	74.312	ENSAOCG00000024124	sympk	92	74.170	Amphiprion_ocellaris
ENSSHAG00000003139	SYMPK	94	74.312	ENSAPEG00000003465	sympk	91	72.937	Amphiprion_percula
ENSSHAG00000003139	SYMPK	97	73.929	ENSATEG00000008472	sympk	91	73.929	Anabas_testudineus
ENSSHAG00000003139	SYMPK	90	82.762	ENSACAG00000004126	SYMPK	88	82.762	Anolis_carolinensis
ENSSHAG00000003139	SYMPK	99	91.154	ENSANAG00000021087	SYMPK	99	92.286	Aotus_nancymaae
ENSSHAG00000003139	SYMPK	98	71.840	ENSACLG00000001813	sympk	94	71.840	Astatotilapia_calliptera
ENSSHAG00000003139	SYMPK	99	71.515	ENSAMXG00000013677	sympk	93	71.639	Astyanax_mexicanus
ENSSHAG00000003139	SYMPK	99	90.807	ENSBTAG00000012101	SYMPK	90	90.893	Bos_taurus
ENSSHAG00000003139	SYMPK	99	91.240	ENSCJAG00000012172	SYMPK	99	90.499	Callithrix_jacchus
ENSSHAG00000003139	SYMPK	99	91.327	ENSCAFG00000004376	SYMPK	90	91.327	Canis_familiaris
ENSSHAG00000003139	SYMPK	99	91.327	ENSCAFG00020001815	SYMPK	90	91.327	Canis_lupus_dingo
ENSSHAG00000003139	SYMPK	99	90.807	ENSCHIG00000026784	SYMPK	90	90.893	Capra_hircus
ENSSHAG00000003139	SYMPK	99	90.320	ENSTSYG00000006268	SYMPK	95	90.096	Carlito_syrichta
ENSSHAG00000003139	SYMPK	93	88.962	ENSCAPG00000005112	SYMPK	96	88.962	Cavia_aperea
ENSSHAG00000003139	SYMPK	99	90.633	ENSCPOG00000010434	SYMPK	92	90.633	Cavia_porcellus
ENSSHAG00000003139	SYMPK	99	91.154	ENSCCAG00000036309	SYMPK	99	92.351	Cebus_capucinus
ENSSHAG00000003139	SYMPK	99	91.240	ENSCATG00000045107	SYMPK	99	92.344	Cercocebus_atys
ENSSHAG00000003139	SYMPK	99	90.980	ENSCLAG00000001206	SYMPK	90	90.980	Chinchilla_lanigera
ENSSHAG00000003139	SYMPK	99	91.240	ENSCSAG00000003115	SYMPK	90	91.240	Chlorocebus_sabaeus
ENSSHAG00000003139	SYMPK	77	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSSHAG00000003139	SYMPK	100	85.813	ENSCPBG00000007170	SYMPK	92	85.900	Chrysemys_picta_bellii
ENSSHAG00000003139	SYMPK	93	49.079	ENSCING00000021232	-	98	48.713	Ciona_intestinalis
ENSSHAG00000003139	SYMPK	90	47.932	ENSCSAVG00000005154	-	100	47.932	Ciona_savignyi
ENSSHAG00000003139	SYMPK	99	89.320	ENSCANG00000040907	SYMPK	99	88.858	Colobus_angolensis_palliatus
ENSSHAG00000003139	SYMPK	91	89.595	ENSCGRG00001010086	Sympk	89	89.884	Cricetulus_griseus_chok1gshd
ENSSHAG00000003139	SYMPK	95	73.703	ENSCSEG00000016802	sympk	89	73.703	Cynoglossus_semilaevis
ENSSHAG00000003139	SYMPK	95	72.389	ENSDARG00000059553	sympk	88	72.389	Danio_rerio
ENSSHAG00000003139	SYMPK	99	90.199	ENSDNOG00000016149	SYMPK	90	90.199	Dasypus_novemcinctus
ENSSHAG00000003139	SYMPK	96	36.879	FBgn0037371	Sym	95	36.879	Drosophila_melanogaster
ENSSHAG00000003139	SYMPK	74	61.264	ENSEBUG00000000387	sympk	88	61.264	Eptatretus_burgeri
ENSSHAG00000003139	SYMPK	99	91.674	ENSEASG00005014227	SYMPK	90	91.674	Equus_asinus_asinus
ENSSHAG00000003139	SYMPK	99	91.674	ENSECAG00000008163	SYMPK	90	91.674	Equus_caballus
ENSSHAG00000003139	SYMPK	76	87.838	ENSEEUG00000000270	-	80	87.838	Erinaceus_europaeus
ENSSHAG00000003139	SYMPK	96	74.753	ENSELUG00000000850	sympk	88	74.753	Esox_lucius
ENSSHAG00000003139	SYMPK	99	91.414	ENSFCAG00000007337	SYMPK	90	91.414	Felis_catus
ENSSHAG00000003139	SYMPK	99	90.460	ENSFDAG00000011272	SYMPK	91	90.460	Fukomys_damarensis
ENSSHAG00000003139	SYMPK	95	74.818	ENSFHEG00000010274	sympk	91	74.057	Fundulus_heteroclitus
ENSSHAG00000003139	SYMPK	93	73.321	ENSGMOG00000002357	sympk	99	73.321	Gadus_morhua
ENSSHAG00000003139	SYMPK	96	74.121	ENSGAFG00000010976	sympk	91	73.792	Gambusia_affinis
ENSSHAG00000003139	SYMPK	98	71.691	ENSGACG00000002735	sympk	99	73.599	Gasterosteus_aculeatus
ENSSHAG00000003139	SYMPK	64	82.927	ENSGAGG00000012538	-	88	83.409	Gopherus_agassizii
ENSSHAG00000003139	SYMPK	99	91.327	ENSGGOG00000003410	SYMPK	97	91.884	Gorilla_gorilla
ENSSHAG00000003139	SYMPK	98	71.927	ENSHBUG00000023564	sympk	94	71.927	Haplochromis_burtoni
ENSSHAG00000003139	SYMPK	99	86.210	ENSHGLG00000005228	SYMPK	90	86.210	Heterocephalus_glaber_female
ENSSHAG00000003139	SYMPK	97	91.525	ENSHGLG00100018571	SYMPK	90	91.525	Heterocephalus_glaber_male
ENSSHAG00000003139	SYMPK	94	69.945	ENSHCOG00000017400	sympk	90	69.945	Hippocampus_comes
ENSSHAG00000003139	SYMPK	95	74.343	ENSIPUG00000024020	SYMPK	90	73.595	Ictalurus_punctatus
ENSSHAG00000003139	SYMPK	99	91.240	ENSSTOG00000001534	SYMPK	90	91.240	Ictidomys_tridecemlineatus
ENSSHAG00000003139	SYMPK	99	90.546	ENSJJAG00000006633	Sympk	90	90.546	Jaculus_jaculus
ENSSHAG00000003139	SYMPK	95	74.702	ENSKMAG00000016292	sympk	93	72.568	Kryptolebias_marmoratus
ENSSHAG00000003139	SYMPK	95	73.756	ENSLBEG00000027913	sympk	96	70.115	Labrus_bergylta
ENSSHAG00000003139	SYMPK	100	70.865	ENSLACG00000016497	SYMPK	95	71.799	Latimeria_chalumnae
ENSSHAG00000003139	SYMPK	99	91.169	ENSLAFG00000008726	SYMPK	90	91.169	Loxodonta_africana
ENSSHAG00000003139	SYMPK	99	91.240	ENSMMUG00000015428	SYMPK	93	90.646	Macaca_mulatta
ENSSHAG00000003139	SYMPK	99	91.067	ENSMNEG00000019439	SYMPK	99	92.250	Macaca_nemestrina
ENSSHAG00000003139	SYMPK	99	91.154	ENSMLEG00000040508	SYMPK	99	92.344	Mandrillus_leucophaeus
ENSSHAG00000003139	SYMPK	96	73.784	ENSMAMG00000010486	sympk	90	73.784	Mastacembelus_armatus
ENSSHAG00000003139	SYMPK	98	71.840	ENSMZEG00005014146	sympk	94	71.840	Maylandia_zebra
ENSSHAG00000003139	SYMPK	99	89.177	ENSMAUG00000015657	Sympk	90	89.410	Mesocricetus_auratus
ENSSHAG00000003139	SYMPK	99	90.893	ENSMICG00000001871	SYMPK	92	91.107	Microcebus_murinus
ENSSHAG00000003139	SYMPK	99	90.336	ENSMOCG00000008388	Sympk	90	90.336	Microtus_ochrogaster
ENSSHAG00000003139	SYMPK	95	71.609	ENSMMOG00000019227	sympk	94	71.609	Mola_mola
ENSSHAG00000003139	SYMPK	100	96.435	ENSMODG00000021534	SYMPK	90	96.435	Monodelphis_domestica
ENSSHAG00000003139	SYMPK	81	68.684	ENSMALG00000008347	sympk	96	69.002	Monopterus_albus
ENSSHAG00000003139	SYMPK	99	90.078	MGP_CAROLIEiJ_G0029267	Sympk	90	90.078	Mus_caroli
ENSSHAG00000003139	SYMPK	99	89.460	ENSMUSG00000023118	Sympk	90	89.460	Mus_musculus
ENSSHAG00000003139	SYMPK	99	90.476	MGP_PahariEiJ_G0021127	Sympk	90	90.476	Mus_pahari
ENSSHAG00000003139	SYMPK	99	89.854	MGP_SPRETEiJ_G0030351	-	91	89.854	Mus_spretus
ENSSHAG00000003139	SYMPK	99	89.506	ENSMPUG00000005505	SYMPK	90	89.506	Mustela_putorius_furo
ENSSHAG00000003139	SYMPK	80	86.466	ENSMLUG00000001359	SYMPK	93	86.466	Myotis_lucifugus
ENSSHAG00000003139	SYMPK	99	90.579	ENSNGAG00000000820	Sympk	91	90.579	Nannospalax_galili
ENSSHAG00000003139	SYMPK	94	73.432	ENSNBRG00000018101	sympk	93	73.432	Neolamprologus_brichardi
ENSSHAG00000003139	SYMPK	99	77.547	ENSNLEG00000002369	SYMPK	90	77.547	Nomascus_leucogenys
ENSSHAG00000003139	SYMPK	80	96.429	ENSMEUG00000003866	SYMPK	72	96.429	Notamacropus_eugenii
ENSSHAG00000003139	SYMPK	99	88.995	ENSOPRG00000009967	SYMPK	90	88.995	Ochotona_princeps
ENSSHAG00000003139	SYMPK	99	90.980	ENSODEG00000007519	SYMPK	90	90.980	Octodon_degus
ENSSHAG00000003139	SYMPK	95	73.799	ENSONIG00000016802	sympk	95	73.799	Oreochromis_niloticus
ENSSHAG00000003139	SYMPK	84	91.012	ENSOCUG00000005511	SYMPK	90	91.012	Oryctolagus_cuniculus
ENSSHAG00000003139	SYMPK	95	74.682	ENSORLG00000015338	sympk	96	73.941	Oryzias_latipes
ENSSHAG00000003139	SYMPK	95	74.410	ENSORLG00020004402	sympk	90	74.410	Oryzias_latipes_hni
ENSSHAG00000003139	SYMPK	95	74.501	ENSORLG00015005712	sympk	90	74.501	Oryzias_latipes_hsok
ENSSHAG00000003139	SYMPK	95	74.501	ENSOMEG00000022561	sympk	90	74.501	Oryzias_melastigma
ENSSHAG00000003139	SYMPK	99	91.154	ENSOGAG00000013483	SYMPK	90	91.154	Otolemur_garnettii
ENSSHAG00000003139	SYMPK	99	86.391	ENSOARG00000010349	SYMPK	91	86.649	Ovis_aries
ENSSHAG00000003139	SYMPK	99	91.154	ENSPPAG00000043204	SYMPK	94	90.784	Pan_paniscus
ENSSHAG00000003139	SYMPK	99	91.327	ENSPPRG00000004282	SYMPK	90	91.327	Panthera_pardus
ENSSHAG00000003139	SYMPK	97	92.039	ENSPTIG00000015420	SYMPK	94	91.882	Panthera_tigris_altaica
ENSSHAG00000003139	SYMPK	99	91.154	ENSPTRG00000011169	SYMPK	94	90.784	Pan_troglodytes
ENSSHAG00000003139	SYMPK	99	91.240	ENSPANG00000019930	SYMPK	99	92.344	Papio_anubis
ENSSHAG00000003139	SYMPK	96	74.799	ENSPKIG00000017132	sympk	95	71.036	Paramormyrops_kingsleyae
ENSSHAG00000003139	SYMPK	99	90.579	ENSPEMG00000007564	Sympk	90	90.579	Peromyscus_maniculatus_bairdii
ENSSHAG00000003139	SYMPK	89	64.593	ENSPMAG00000004936	sympk	100	64.689	Petromyzon_marinus
ENSSHAG00000003139	SYMPK	100	97.826	ENSPCIG00000024476	SYMPK	94	95.097	Phascolarctos_cinereus
ENSSHAG00000003139	SYMPK	95	74.249	ENSPFOG00000001194	sympk	91	73.661	Poecilia_formosa
ENSSHAG00000003139	SYMPK	95	74.047	ENSPLAG00000012995	sympk	91	73.571	Poecilia_latipinna
ENSSHAG00000003139	SYMPK	95	74.047	ENSPMEG00000008099	sympk	91	73.571	Poecilia_mexicana
ENSSHAG00000003139	SYMPK	96	73.543	ENSPREG00000006176	sympk	91	73.482	Poecilia_reticulata
ENSSHAG00000003139	SYMPK	96	92.148	ENSPPYG00000010135	SYMPK	99	92.148	Pongo_abelii
ENSSHAG00000003139	SYMPK	93	85.772	ENSPCAG00000005182	SYMPK	84	85.772	Procavia_capensis
ENSSHAG00000003139	SYMPK	99	90.720	ENSPCOG00000023740	SYMPK	99	91.620	Propithecus_coquereli
ENSSHAG00000003139	SYMPK	99	89.332	ENSPVAG00000001355	SYMPK	93	89.332	Pteropus_vampyrus
ENSSHAG00000003139	SYMPK	98	71.840	ENSPNYG00000011455	sympk	93	71.840	Pundamilia_nyererei
ENSSHAG00000003139	SYMPK	97	73.820	ENSPNAG00000016505	sympk	89	73.820	Pygocentrus_nattereri
ENSSHAG00000003139	SYMPK	99	90.250	ENSRNOG00000014353	Sympk	90	90.250	Rattus_norvegicus
ENSSHAG00000003139	SYMPK	99	91.240	ENSRBIG00000040963	SYMPK	99	92.358	Rhinopithecus_bieti
ENSSHAG00000003139	SYMPK	99	91.240	ENSRROG00000024834	SYMPK	97	92.144	Rhinopithecus_roxellana
ENSSHAG00000003139	SYMPK	99	91.067	ENSSBOG00000034497	SYMPK	95	90.646	Saimiri_boliviensis_boliviensis
ENSSHAG00000003139	SYMPK	97	74.689	ENSSFOG00015006974	sympk	90	74.689	Scleropages_formosus
ENSSHAG00000003139	SYMPK	95	73.593	ENSSMAG00000018130	sympk	72	73.394	Scophthalmus_maximus
ENSSHAG00000003139	SYMPK	95	73.913	ENSSDUG00000007092	sympk	90	73.913	Seriola_dumerili
ENSSHAG00000003139	SYMPK	95	73.913	ENSSLDG00000014774	sympk	96	70.981	Seriola_lalandi_dorsalis
ENSSHAG00000003139	SYMPK	65	95.385	ENSSARG00000004274	-	63	95.385	Sorex_araneus
ENSSHAG00000003139	SYMPK	100	84.028	ENSSPUG00000002789	SYMPK	88	84.028	Sphenodon_punctatus
ENSSHAG00000003139	SYMPK	94	74.977	ENSSPAG00000000854	sympk	89	74.476	Stegastes_partitus
ENSSHAG00000003139	SYMPK	99	90.980	ENSSSCG00000003093	SYMPK	90	91.067	Sus_scrofa
ENSSHAG00000003139	SYMPK	97	72.906	ENSTRUG00000010202	sympk	92	72.906	Takifugu_rubripes
ENSSHAG00000003139	SYMPK	95	73.102	ENSTNIG00000017855	sympk	99	71.568	Tetraodon_nigroviridis
ENSSHAG00000003139	SYMPK	86	94.156	ENSTBEG00000000454	SYMPK	77	94.156	Tupaia_belangeri
ENSSHAG00000003139	SYMPK	99	81.960	ENSTTRG00000014311	SYMPK	90	82.047	Tursiops_truncatus
ENSSHAG00000003139	SYMPK	99	89.053	ENSUAMG00000022272	SYMPK	95	90.870	Ursus_americanus
ENSSHAG00000003139	SYMPK	99	91.240	ENSUMAG00000023698	SYMPK	90	91.240	Ursus_maritimus
ENSSHAG00000003139	SYMPK	97	92.218	ENSVVUG00000003024	SYMPK	97	92.218	Vulpes_vulpes
ENSSHAG00000003139	SYMPK	99	72.528	ENSXETG00000024453	sympk	94	72.616	Xenopus_tropicalis
ENSSHAG00000003139	SYMPK	93	73.524	ENSXCOG00000015368	sympk	99	73.524	Xiphophorus_couchianus
ENSSHAG00000003139	SYMPK	96	74.482	ENSXMAG00000005737	sympk	91	74.196	Xiphophorus_maculatus