EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000003250 (Gene tree)
Gene ID
100914924
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Plus strand
Length
77298 bases
Position
chrGL864732.1:57102-134399
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5719
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5729
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5739
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5749
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5759
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5769
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5779
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5789
ENSSHAP00000003696zf-C2H2PF00096.264.4e-5799
ENSSHAP00000003696zf-metPF12874.71.1e-2615
ENSSHAP00000003696zf-metPF12874.71.1e-2625
ENSSHAP00000003696zf-metPF12874.71.1e-2635
ENSSHAP00000003696zf-metPF12874.71.1e-2645
ENSSHAP00000003696zf-metPF12874.71.1e-2655
ENSSHAP00000003696zf-C2H2_jazPF12171.85.3e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000003733PRDM5-2011540-ENSSHAP00000003696488 (aa)-G3VKJ1
Gene Model
Click here to download ENSSHAG00000003250's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003250's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000003250PRDM57842.500ENSSHAG00000018217ZNF5219242.500
ENSSHAG00000003250PRDM56134.513ENSSHAG00000011015SNAI15434.513
ENSSHAG00000003250PRDM57136.937ENSSHAG00000004205SNAI25236.937
ENSSHAG00000003250PRDM56531.472ENSSHAG00000006462GFI1B5730.732
ENSSHAG00000003250PRDM57740.854ENSSHAG00000008255ZNF7686338.265
ENSSHAG00000003250PRDM57736.923ENSSHAG00000018373ZFAT5036.905
ENSSHAG00000003250PRDM57942.361ENSSHAG00000011347ZNF6689950.847
ENSSHAG00000003250PRDM58038.914ENSSHAG00000011714-6138.914
ENSSHAG00000003250PRDM57835.580ENSSHAG00000003284-7435.156
ENSSHAG00000003250PRDM57934.112ENSSHAG00000009882ZBTB168632.143
ENSSHAG00000003250PRDM57735.526ENSSHAG00000003090-8435.526
ENSSHAG00000003250PRDM57635.714ENSSHAG00000016965GTF3A7435.714
ENSSHAG00000003250PRDM57931.455ENSSHAG00000018342ZNF4239531.455
ENSSHAG00000003250PRDM58236.957ENSSHAG00000001415-8436.957
ENSSHAG00000003250PRDM57636.697ENSSHAG00000003850ZIC25036.697
ENSSHAG00000003250PRDM57735.897ENSSHAG00000014216-9035.897
ENSSHAG00000003250PRDM58544.898ENSSHAG00000013079ZNF2365244.898
ENSSHAG00000003250PRDM57932.661ENSSHAG00000011486-9934.731
ENSSHAG00000003250PRDM57740.930ENSSHAG00000016096-9931.500
ENSSHAG00000003250PRDM58837.264ENSSHAG00000011906-6237.727
ENSSHAG00000003250PRDM57736.126ENSSHAG00000018106-7636.126
ENSSHAG00000003250PRDM59442.105ENSSHAG00000015972PRDM125442.105
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000003250PRDM510079.713ENSG00000138738PRDM59079.303Homo_sapiens
ENSSHAG00000003250PRDM510074.847ENSAPOG00000023220prdm59073.824Acanthochromis_polyacanthus
ENSSHAG00000003250PRDM510078.484ENSAMEG00000003050PRDM59877.869Ailuropoda_melanoleuca
ENSSHAG00000003250PRDM59875.574ENSACIG00000000406prdm59174.739Amphilophus_citrinellus
ENSSHAG00000003250PRDM510075.869ENSAOCG00000014806prdm59075.869Amphiprion_ocellaris
ENSSHAG00000003250PRDM510072.745ENSAPEG00000016846prdm58172.745Amphiprion_percula
ENSSHAG00000003250PRDM510078.119ENSATEG00000013829prdm59177.914Anabas_testudineus
ENSSHAG00000003250PRDM510084.631ENSAPLG00000013828PRDM59584.631Anas_platyrhynchos
ENSSHAG00000003250PRDM510077.664ENSACAG00000012999PRDM59178.074Anolis_carolinensis
ENSSHAG00000003250PRDM510088.987ENSANAG00000027411PRDM58591.803Aotus_nancymaae
ENSSHAG00000003250PRDM510075.460ENSACLG00000017996prdm59074.642Astatotilapia_calliptera
ENSSHAG00000003250PRDM59278.492ENSAMXG00000041864prdm59975.991Astyanax_mexicanus
ENSSHAG00000003250PRDM510079.303ENSBTAG00000012111PRDM59179.098Bos_taurus
ENSSHAG00000003250PRDM59991.803ENSCJAG00000003133PRDM58591.803Callithrix_jacchus
ENSSHAG00000003250PRDM510074.385ENSCAFG00000004179PRDM59974.385Canis_familiaris
ENSSHAG00000003250PRDM510080.123ENSCAFG00020017685PRDM59079.918Canis_lupus_dingo
ENSSHAG00000003250PRDM510077.869ENSCHIG00000018772PRDM59077.869Capra_hircus
ENSSHAG00000003250PRDM510079.713ENSTSYG00000009630PRDM59079.508Carlito_syrichta
ENSSHAG00000003250PRDM59990.164ENSCAPG00000015217PRDM59890.164Cavia_aperea
ENSSHAG00000003250PRDM59990.164ENSCPOG00000012883PRDM59890.164Cavia_porcellus
ENSSHAG00000003250PRDM510089.427ENSCCAG00000023157PRDM58591.803Cebus_capucinus
ENSSHAG00000003250PRDM510089.868ENSCATG00000042510PRDM58591.803Cercocebus_atys
ENSSHAG00000003250PRDM59990.164ENSCLAG00000005392PRDM59890.164Chinchilla_lanigera
ENSSHAG00000003250PRDM510076.230ENSCSAG00000003729PRDM59075.615Chlorocebus_sabaeus
ENSSHAG00000003250PRDM510074.619ENSCHOG00000007801PRDM58074.619Choloepus_hoffmanni
ENSSHAG00000003250PRDM510083.806ENSCPBG00000024735PRDM59183.806Chrysemys_picta_bellii
ENSSHAG00000003250PRDM59991.803ENSCANG00000036807PRDM58591.803Colobus_angolensis_palliatus
ENSSHAG00000003250PRDM59990.164ENSCGRG00001010581Prdm58590.164Cricetulus_griseus_chok1gshd
ENSSHAG00000003250PRDM510065.779ENSCGRG00000010996-9465.369Cricetulus_griseus_crigri
ENSSHAG00000003250PRDM510074.438ENSCSEG00000019979prdm59074.642Cynoglossus_semilaevis
ENSSHAG00000003250PRDM510072.597ENSCVAG00000013692prdm59071.984Cyprinodon_variegatus
ENSSHAG00000003250PRDM510076.327ENSDARG00000006288prdm59176.327Danio_rerio
ENSSHAG00000003250PRDM510079.346ENSDNOG00000002009PRDM59979.141Dasypus_novemcinctus
ENSSHAG00000003250PRDM510088.546ENSDORG00000007739Prdm58688.546Dipodomys_ordii
ENSSHAG00000003250PRDM59953.398ENSETEG00000020268PRDM58082.857Echinops_telfairi
ENSSHAG00000003250PRDM510066.122ENSEBUG00000004301prdm59166.189Eptatretus_burgeri
ENSSHAG00000003250PRDM59991.803ENSEASG00005018365PRDM58691.803Equus_asinus_asinus
ENSSHAG00000003250PRDM510072.083ENSECAG00000024747-8573.191Equus_caballus
ENSSHAG00000003250PRDM510079.508ENSECAG00000011516PRDM58879.303Equus_caballus
ENSSHAG00000003250PRDM510072.541ENSEEUG00000010306PRDM59072.336Erinaceus_europaeus
ENSSHAG00000003250PRDM510077.551ENSELUG00000005894prdm58377.439Esox_lucius
ENSSHAG00000003250PRDM510079.508ENSFCAG00000025656PRDM59179.303Felis_catus
ENSSHAG00000003250PRDM59974.717ENSFALG00000008381PRDM58374.717Ficedula_albicollis
ENSSHAG00000003250PRDM59990.164ENSFDAG00000021361PRDM58590.164Fukomys_damarensis
ENSSHAG00000003250PRDM510075.460ENSFHEG00000013040prdm59074.642Fundulus_heteroclitus
ENSSHAG00000003250PRDM59396.721ENSGMOG00000012038prdm58696.721Gadus_morhua
ENSSHAG00000003250PRDM510083.607ENSGALG00000011963PRDM59183.607Gallus_gallus
ENSSHAG00000003250PRDM510078.528ENSGAFG00000019233prdm59074.847Gambusia_affinis
ENSSHAG00000003250PRDM59982.618ENSGAGG00000020362PRDM58883.047Gopherus_agassizii
ENSSHAG00000003250PRDM510089.868ENSGGOG00000013562PRDM58591.803Gorilla_gorilla
ENSSHAG00000003250PRDM510075.051ENSHBUG00000023375prdm59073.824Haplochromis_burtoni
ENSSHAG00000003250PRDM59985.398ENSHGLG00000003010PRDM58485.398Heterocephalus_glaber_female
ENSSHAG00000003250PRDM510089.427ENSHGLG00100003696PRDM58590.164Heterocephalus_glaber_male
ENSSHAG00000003250PRDM510077.551ENSHCOG00000012131prdm59176.939Hippocampus_comes
ENSSHAG00000003250PRDM510077.959ENSIPUG00000001248prdm59177.959Ictalurus_punctatus
ENSSHAG00000003250PRDM59991.803ENSSTOG00000004741PRDM59891.803Ictidomys_tridecemlineatus
ENSSHAG00000003250PRDM59990.164ENSJJAG00000011464Prdm59890.164Jaculus_jaculus
ENSSHAG00000003250PRDM510075.460ENSKMAG00000013663prdm59075.460Kryptolebias_marmoratus
ENSSHAG00000003250PRDM510078.323ENSLBEG00000022736prdm59176.782Labrus_bergylta
ENSSHAG00000003250PRDM510081.967ENSLACG00000009187PRDM59981.967Latimeria_chalumnae
ENSSHAG00000003250PRDM510079.713ENSLOCG00000009778prdm59179.508Lepisosteus_oculatus
ENSSHAG00000003250PRDM510075.615ENSLAFG00000006532PRDM59981.057Loxodonta_africana
ENSSHAG00000003250PRDM510089.868ENSMFAG00000045845PRDM58591.803Macaca_fascicularis
ENSSHAG00000003250PRDM510089.868ENSMMUG00000003249PRDM58591.803Macaca_mulatta
ENSSHAG00000003250PRDM510089.868ENSMNEG00000019018PRDM58591.803Macaca_nemestrina
ENSSHAG00000003250PRDM510079.713ENSMLEG00000023145PRDM59579.508Mandrillus_leucophaeus
ENSSHAG00000003250PRDM510077.096ENSMAMG00000013419prdm59176.531Mastacembelus_armatus
ENSSHAG00000003250PRDM510075.051ENSMZEG00005020645prdm59073.824Maylandia_zebra
ENSSHAG00000003250PRDM510084.016ENSMGAG00000010710PRDM59584.016Meleagris_gallopavo
ENSSHAG00000003250PRDM59990.164ENSMAUG00000006768Prdm58590.164Mesocricetus_auratus
ENSSHAG00000003250PRDM59990.164ENSMICG00000001459PRDM58590.164Microcebus_murinus
ENSSHAG00000003250PRDM59990.164ENSMOCG00000016267Prdm58590.164Microtus_ochrogaster
ENSSHAG00000003250PRDM510075.256ENSMMOG00000006035prdm59074.233Mola_mola
ENSSHAG00000003250PRDM510093.033ENSMODG00000018942PRDM59193.033Monodelphis_domestica
ENSSHAG00000003250PRDM510071.779ENSMALG00000013934prdm59070.348Monopterus_albus
ENSSHAG00000003250PRDM59990.164MGP_CAROLIEiJ_G0028463Prdm58590.164Mus_caroli
ENSSHAG00000003250PRDM510088.106ENSMUSG00000029913Prdm58590.164Mus_musculus
ENSSHAG00000003250PRDM59990.164MGP_PahariEiJ_G0022203Prdm58590.164Mus_pahari
ENSSHAG00000003250PRDM59990.164MGP_SPRETEiJ_G0029467Prdm58590.164Mus_spretus
ENSSHAG00000003250PRDM510078.893ENSMPUG00000017415PRDM59178.689Mustela_putorius_furo
ENSSHAG00000003250PRDM510075.615ENSMLUG00000006097PRDM59875.410Myotis_lucifugus
ENSSHAG00000003250PRDM59990.164ENSNGAG00000018317Prdm58590.164Nannospalax_galili
ENSSHAG00000003250PRDM59972.032ENSNBRG00000004976prdm59071.227Neolamprologus_brichardi
ENSSHAG00000003250PRDM510089.868ENSNLEG00000009107PRDM58591.803Nomascus_leucogenys
ENSSHAG00000003250PRDM578100.000ENSMEUG00000006576-61100.000Notamacropus_eugenii
ENSSHAG00000003250PRDM59168.434ENSOPRG00000011066-7068.193Ochotona_princeps
ENSSHAG00000003250PRDM59990.164ENSODEG00000009133PRDM58590.164Octodon_degus
ENSSHAG00000003250PRDM510078.528ENSONIG00000003111prdm59178.119Oreochromis_niloticus
ENSSHAG00000003250PRDM59978.308ENSOANG00000015109PRDM58678.308Ornithorhynchus_anatinus
ENSSHAG00000003250PRDM57041.818ENSOANG00000006197-9941.818Ornithorhynchus_anatinus
ENSSHAG00000003250PRDM510079.918ENSOCUG00000013454PRDM59779.713Oryctolagus_cuniculus
ENSSHAG00000003250PRDM510075.256ENSORLG00000016247prdm59074.233Oryzias_latipes
ENSSHAG00000003250PRDM510074.847ENSORLG00020018051prdm59074.642Oryzias_latipes_hni
ENSSHAG00000003250PRDM510075.256ENSORLG00015013760prdm59074.233Oryzias_latipes_hsok
ENSSHAG00000003250PRDM510075.306ENSOMEG00000005143prdm59074.898Oryzias_melastigma
ENSSHAG00000003250PRDM59171.910ENSOGAG00000009996PRDM59864.732Otolemur_garnettii
ENSSHAG00000003250PRDM510078.074ENSOARG00000015473PRDM59978.384Ovis_aries
ENSSHAG00000003250PRDM510079.713ENSPPAG00000043045PRDM59779.303Pan_paniscus
ENSSHAG00000003250PRDM510079.713ENSPPRG00000001020PRDM59179.508Panthera_pardus
ENSSHAG00000003250PRDM510079.303ENSPTIG00000010807PRDM59179.098Panthera_tigris_altaica
ENSSHAG00000003250PRDM510089.868ENSPTRG00000016403PRDM58591.803Pan_troglodytes
ENSSHAG00000003250PRDM510089.868ENSPANG00000023612PRDM58591.803Papio_anubis
ENSSHAG00000003250PRDM510051.172ENSPKIG00000015492prdm58949.697Paramormyrops_kingsleyae
ENSSHAG00000003250PRDM510084.631ENSPSIG00000013505PRDM59184.631Pelodiscus_sinensis
ENSSHAG00000003250PRDM510072.597ENSPMGG00000012622prdm59071.984Periophthalmus_magnuspinnatus
ENSSHAG00000003250PRDM57770.745ENSPMAG00000005248prdm510066.755Petromyzon_marinus
ENSSHAG00000003250PRDM59967.347ENSPFOG00000018630prdm58466.761Poecilia_formosa
ENSSHAG00000003250PRDM510077.914ENSPLAG00000014148prdm59177.096Poecilia_latipinna
ENSSHAG00000003250PRDM510075.665ENSPMEG00000018002prdm59074.847Poecilia_mexicana
ENSSHAG00000003250PRDM510075.665ENSPREG00000018366prdm59074.847Poecilia_reticulata
ENSSHAG00000003250PRDM510079.713ENSPPYG00000015031PRDM59079.303Pongo_abelii
ENSSHAG00000003250PRDM510073.156ENSPCAG00000011671PRDM59672.951Procavia_capensis
ENSSHAG00000003250PRDM59990.164ENSPCOG00000022828PRDM58590.164Propithecus_coquereli
ENSSHAG00000003250PRDM510074.385ENSPVAG00000012309PRDM59474.385Pteropus_vampyrus
ENSSHAG00000003250PRDM510075.256ENSPNYG00000012194prdm59074.438Pundamilia_nyererei
ENSSHAG00000003250PRDM510075.714ENSPNAG00000023191-9875.714Pygocentrus_nattereri
ENSSHAG00000003250PRDM510075.460ENSPNAG00000026181prdm59072.727Pygocentrus_nattereri
ENSSHAG00000003250PRDM510072.131ENSRNOG00000023679Prdm59071.926Rattus_norvegicus
ENSSHAG00000003250PRDM510089.868ENSRBIG00000041307PRDM58591.803Rhinopithecus_bieti
ENSSHAG00000003250PRDM510068.163ENSRROG00000035343PRDM59667.195Rhinopithecus_roxellana
ENSSHAG00000003250PRDM510089.427ENSSBOG00000022100PRDM58591.803Saimiri_boliviensis_boliviensis
ENSSHAG00000003250PRDM510073.620ENSSFOG00015020478prdm59173.006Scleropages_formosus
ENSSHAG00000003250PRDM510078.323ENSSMAG00000018844prdm59178.323Scophthalmus_maximus
ENSSHAG00000003250PRDM510078.732ENSSDUG00000020397prdm59075.460Seriola_dumerili
ENSSHAG00000003250PRDM510078.411ENSSLDG00000013353prdm59075.460Seriola_lalandi_dorsalis
ENSSHAG00000003250PRDM59489.286ENSSARG00000014129-6189.286Sorex_araneus
ENSSHAG00000003250PRDM59995.133ENSSPUG00000009941PRDM58695.000Sphenodon_punctatus
ENSSHAG00000003250PRDM510078.732ENSSPAG00000013866prdm59177.914Stegastes_partitus
ENSSHAG00000003250PRDM510080.738ENSSSCG00000009101PRDM59180.533Sus_scrofa
ENSSHAG00000003250PRDM510084.016ENSTGUG00000001920PRDM59583.811Taeniopygia_guttata
ENSSHAG00000003250PRDM510075.256ENSTRUG00000013850prdm59075.256Takifugu_rubripes
ENSSHAG00000003250PRDM59958.994ENSTNIG00000005901prdm59158.801Tetraodon_nigroviridis
ENSSHAG00000003250PRDM510091.667ENSTBEG00000015386PRDM58191.667Tupaia_belangeri
ENSSHAG00000003250PRDM510079.713ENSTTRG00000010996PRDM59179.508Tursiops_truncatus
ENSSHAG00000003250PRDM510089.868ENSUAMG00000009994PRDM56989.868Ursus_americanus
ENSSHAG00000003250PRDM510089.868ENSUMAG00000003733PRDM59289.868Ursus_maritimus
ENSSHAG00000003250PRDM510072.951ENSVPAG00000007435PRDM59472.541Vicugna_pacos
ENSSHAG00000003250PRDM510079.918ENSVVUG00000013192PRDM59679.713Vulpes_vulpes
ENSSHAG00000003250PRDM510077.049ENSXETG00000002101prdm59177.049Xenopus_tropicalis
ENSSHAG00000003250PRDM510075.460ENSXCOG00000008567prdm59074.847Xiphophorus_couchianus
ENSSHAG00000003250PRDM510078.528ENSXMAG00000013825prdm59074.847Xiphophorus_maculatus

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