EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000003284 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2094 bases
Position: chrGL857011.1:58150-60243
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	1	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	2	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	3	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	4	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	5	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	6	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	7	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	8	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	9	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	10	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	11	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	12	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	13	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	14	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	15	16
ENSSHAP00000003733	zf-C2H2	PF00096.26	8.8e-93	16	16
ENSSHAP00000003733	zf-met	PF12874.7	5.4e-14	1	2
ENSSHAP00000003733	zf-met	PF12874.7	5.4e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000003770	-	2094	-	ENSSHAP00000003733	697 (aa)	-	G3VKM8

Gene Model

Click here to download ENSSHAG00000003284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000003284	-	66	46.154	ENSSHAG00000012248	-	90	46.154
ENSSHAG00000003284	-	78	40.152	ENSSHAG00000004205	SNAI2	65	40.152
ENSSHAG00000003284	-	84	53.614	ENSSHAG00000005922	-	60	53.216
ENSSHAG00000003284	-	94	55.242	ENSSHAG00000011906	-	70	55.242
ENSSHAG00000003284	-	93	47.601	ENSSHAG00000001415	-	84	47.601
ENSSHAG00000003284	-	83	42.553	ENSSHAG00000018106	-	81	42.905
ENSSHAG00000003284	-	73	42.222	ENSSHAG00000015025	ZIC1	61	41.284
ENSSHAG00000003284	-	77	45.673	ENSSHAG00000016096	-	99	36.929
ENSSHAG00000003284	-	82	36.283	ENSSHAG00000018217	ZNF521	87	36.283
ENSSHAG00000003284	-	66	36.735	ENSSHAG00000006462	GFI1B	56	36.735
ENSSHAG00000003284	-	73	36.397	ENSSHAG00000016965	GTF3A	77	36.397
ENSSHAG00000003284	-	76	37.131	ENSSHAG00000009882	ZBTB16	97	35.227
ENSSHAG00000003284	-	77	46.875	ENSSHAG00000011347	ZNF668	97	46.875
ENSSHAG00000003284	-	97	44.427	ENSSHAG00000003090	-	91	47.452
ENSSHAG00000003284	-	74	42.373	ENSSHAG00000013079	ZNF236	61	42.857
ENSSHAG00000003284	-	77	33.673	ENSSHAG00000018342	ZNF423	95	33.673
ENSSHAG00000003284	-	77	37.324	ENSSHAG00000011015	SNAI1	79	37.324
ENSSHAG00000003284	-	68	38.298	ENSSHAG00000003850	ZIC2	54	37.984
ENSSHAG00000003284	-	75	34.825	ENSSHAG00000011486	-	99	34.825
ENSSHAG00000003284	-	78	39.662	ENSSHAG00000002263	ZNF652	50	39.662
ENSSHAG00000003284	-	77	42.056	ENSSHAG00000004332	-	92	41.667
ENSSHAG00000003284	-	93	57.602	ENSSHAG00000014216	-	96	57.602
ENSSHAG00000003284	-	92	53.846	ENSSHAG00000011714	-	63	53.846
ENSSHAG00000003284	-	74	35.156	ENSSHAG00000003250	PRDM5	78	35.580
ENSSHAG00000003284	-	92	49.097	ENSSHAG00000008255	ZNF768	64	48.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003284	-	90	48.158	ENSCSAG00000014798	-	85	47.976	Chlorocebus_sabaeus