EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000003511 (Gene tree)
Gene ID: 100934116
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 63148 bases
Position: chrGL861726.1:65426-128573
Accession: 29167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003985	R3H	PF01424.22	1.7e-10	1	1
ENSSHAP00000003986	R3H	PF01424.22	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004026	R3HDM2-202	3161	-	ENSSHAP00000003986	1042 (aa)	-	G3VLD1
ENSSHAT00000004025	R3HDM2-201	3387	-	ENSSHAP00000003985	875 (aa)	-	G3VLD0

Gene Model

Click here to download ENSSHAG00000003511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000003511	R3HDM2	99	49.333	ENSSHAG00000016999	R3HDM1	99	46.470

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003511	R3HDM2	99	91.705	ENSG00000179912	R3HDM2	100	96.552	Homo_sapiens
ENSSHAG00000003511	R3HDM2	67	36.124	ENSAPOG00000021873	-	79	38.769	Acanthochromis_polyacanthus
ENSSHAG00000003511	R3HDM2	99	66.113	ENSAPOG00000020341	r3hdm2	99	63.963	Acanthochromis_polyacanthus
ENSSHAG00000003511	R3HDM2	100	87.274	ENSAMEG00000004812	R3HDM2	100	87.559	Ailuropoda_melanoleuca
ENSSHAG00000003511	R3HDM2	92	65.509	ENSACIG00000016146	r3hdm2	98	58.524	Amphilophus_citrinellus
ENSSHAG00000003511	R3HDM2	99	63.952	ENSAOCG00000023694	r3hdm2	99	63.871	Amphiprion_ocellaris
ENSSHAG00000003511	R3HDM2	69	36.364	ENSAOCG00000003840	-	93	36.290	Amphiprion_ocellaris
ENSSHAG00000003511	R3HDM2	99	66.002	ENSAPEG00000008851	r3hdm2	99	63.610	Amphiprion_percula
ENSSHAG00000003511	R3HDM2	69	36.826	ENSAPEG00000014325	-	79	39.174	Amphiprion_percula
ENSSHAG00000003511	R3HDM2	70	35.994	ENSATEG00000015519	-	79	38.087	Anabas_testudineus
ENSSHAG00000003511	R3HDM2	99	64.680	ENSATEG00000025024	r3hdm2	100	61.386	Anabas_testudineus
ENSSHAG00000003511	R3HDM2	99	81.828	ENSACAG00000006388	R3HDM2	100	74.838	Anolis_carolinensis
ENSSHAG00000003511	R3HDM2	99	91.695	ENSANAG00000025397	-	100	84.924	Aotus_nancymaae
ENSSHAG00000003511	R3HDM2	97	87.529	ENSANAG00000031310	-	100	78.578	Aotus_nancymaae
ENSSHAG00000003511	R3HDM2	99	64.355	ENSACLG00000019106	r3hdm2	99	64.114	Astatotilapia_calliptera
ENSSHAG00000003511	R3HDM2	85	73.585	ENSAMXG00000017180	r3hdm2	99	57.512	Astyanax_mexicanus
ENSSHAG00000003511	R3HDM2	99	91.581	ENSBTAG00000018361	R3HDM2	100	83.206	Bos_taurus
ENSSHAG00000003511	R3HDM2	99	91.572	ENSCJAG00000007365	R3HDM2	100	84.814	Callithrix_jacchus
ENSSHAG00000003511	R3HDM2	99	91.290	ENSCAFG00000000215	R3HDM2	100	84.952	Canis_familiaris
ENSSHAG00000003511	R3HDM2	99	91.260	ENSCAFG00020023713	R3HDM2	100	86.667	Canis_lupus_dingo
ENSSHAG00000003511	R3HDM2	99	91.126	ENSCHIG00000014022	R3HDM2	100	86.164	Capra_hircus
ENSSHAG00000003511	R3HDM2	99	90.169	ENSTSYG00000001449	R3HDM2	100	83.714	Carlito_syrichta
ENSSHAG00000003511	R3HDM2	99	89.054	ENSCPOG00000009217	R3HDM2	100	85.468	Cavia_porcellus
ENSSHAG00000003511	R3HDM2	99	91.800	ENSCCAG00000026083	R3HDM2	100	92.027	Cebus_capucinus
ENSSHAG00000003511	R3HDM2	99	91.477	ENSCATG00000036929	R3HDM2	100	86.463	Cercocebus_atys
ENSSHAG00000003511	R3HDM2	99	90.260	ENSCLAG00000011997	R3HDM2	100	86.597	Chinchilla_lanigera
ENSSHAG00000003511	R3HDM2	99	87.800	ENSCSAG00000004911	R3HDM2	100	85.850	Chlorocebus_sabaeus
ENSSHAG00000003511	R3HDM2	81	85.763	ENSCHOG00000005636	R3HDM2	91	88.423	Choloepus_hoffmanni
ENSSHAG00000003511	R3HDM2	99	80.087	ENSCPBG00000013922	R3HDM2	100	78.431	Chrysemys_picta_bellii
ENSSHAG00000003511	R3HDM2	99	91.800	ENSCANG00000043807	R3HDM2	100	86.724	Colobus_angolensis_palliatus
ENSSHAG00000003511	R3HDM2	99	88.448	ENSCGRG00001017324	R3hdm2	100	84.506	Cricetulus_griseus_chok1gshd
ENSSHAG00000003511	R3HDM2	99	85.730	ENSCGRG00000003862	R3hdm2	100	84.506	Cricetulus_griseus_crigri
ENSSHAG00000003511	R3HDM2	95	64.719	ENSCSEG00000010925	r3hdm2	99	62.891	Cynoglossus_semilaevis
ENSSHAG00000003511	R3HDM2	99	62.527	ENSCVAG00000009058	r3hdm2	99	63.309	Cyprinodon_variegatus
ENSSHAG00000003511	R3HDM2	92	64.528	ENSDARG00000102610	r3hdm2	99	61.139	Danio_rerio
ENSSHAG00000003511	R3HDM2	99	87.432	ENSDNOG00000015033	R3HDM2	100	86.211	Dasypus_novemcinctus
ENSSHAG00000003511	R3HDM2	93	85.119	ENSDORG00000011462	R3hdm2	99	80.422	Dipodomys_ordii
ENSSHAG00000003511	R3HDM2	99	91.156	ENSEASG00005007091	R3HDM2	100	87.536	Equus_asinus_asinus
ENSSHAG00000003511	R3HDM2	99	91.800	ENSECAG00000003157	R3HDM2	100	88.061	Equus_caballus
ENSSHAG00000003511	R3HDM2	95	65.085	ENSELUG00000015969	r3hdm2	98	61.357	Esox_lucius
ENSSHAG00000003511	R3HDM2	99	89.766	ENSFCAG00000000192	R3HDM2	99	87.379	Felis_catus
ENSSHAG00000003511	R3HDM2	99	89.286	ENSFALG00000000255	R3HDM2	100	76.264	Ficedula_albicollis
ENSSHAG00000003511	R3HDM2	99	88.927	ENSFDAG00000019385	R3HDM2	100	85.769	Fukomys_damarensis
ENSSHAG00000003511	R3HDM2	50	38.989	ENSFHEG00000007936	-	85	37.977	Fundulus_heteroclitus
ENSSHAG00000003511	R3HDM2	99	64.784	ENSFHEG00000016484	r3hdm2	99	63.343	Fundulus_heteroclitus
ENSSHAG00000003511	R3HDM2	95	62.977	ENSGMOG00000007961	r3hdm2	100	61.863	Gadus_morhua
ENSSHAG00000003511	R3HDM2	100	79.122	ENSGALG00000043736	R3HDM2	100	74.793	Gallus_gallus
ENSSHAG00000003511	R3HDM2	62	37.387	ENSGAFG00000015558	-	78	39.698	Gambusia_affinis
ENSSHAG00000003511	R3HDM2	99	63.220	ENSGAFG00000013887	r3hdm2	99	63.494	Gambusia_affinis
ENSSHAG00000003511	R3HDM2	95	65.588	ENSGACG00000006442	r3hdm2	100	65.053	Gasterosteus_aculeatus
ENSSHAG00000003511	R3HDM2	99	81.637	ENSGAGG00000017797	R3HDM2	99	78.099	Gopherus_agassizii
ENSSHAG00000003511	R3HDM2	99	91.591	ENSGGOG00000015007	R3HDM2	100	86.559	Gorilla_gorilla
ENSSHAG00000003511	R3HDM2	67	35.714	ENSHBUG00000018525	-	83	36.306	Haplochromis_burtoni
ENSSHAG00000003511	R3HDM2	100	85.538	ENSHGLG00000010434	-	100	85.538	Heterocephalus_glaber_female
ENSSHAG00000003511	R3HDM2	87	81.323	ENSHGLG00000010421	-	97	71.898	Heterocephalus_glaber_female
ENSSHAG00000003511	R3HDM2	97	79.326	ENSHGLG00100018871	-	99	71.627	Heterocephalus_glaber_male
ENSSHAG00000003511	R3HDM2	99	89.002	ENSHGLG00100004183	-	100	85.538	Heterocephalus_glaber_male
ENSSHAG00000003511	R3HDM2	99	63.300	ENSHCOG00000001142	r3hdm2	96	61.842	Hippocampus_comes
ENSSHAG00000003511	R3HDM2	99	61.638	ENSIPUG00000023873	r3hdm2	99	59.691	Ictalurus_punctatus
ENSSHAG00000003511	R3HDM2	99	85.277	ENSSTOG00000013424	R3HDM2	100	80.228	Ictidomys_tridecemlineatus
ENSSHAG00000003511	R3HDM2	100	86.260	ENSJJAG00000010001	R3hdm2	100	86.450	Jaculus_jaculus
ENSSHAG00000003511	R3HDM2	53	36.923	ENSKMAG00000004052	-	78	37.069	Kryptolebias_marmoratus
ENSSHAG00000003511	R3HDM2	92	70.000	ENSKMAG00000012695	r3hdm2	99	61.600	Kryptolebias_marmoratus
ENSSHAG00000003511	R3HDM2	99	63.124	ENSLBEG00000013115	r3hdm2	96	62.569	Labrus_bergylta
ENSSHAG00000003511	R3HDM2	95	69.930	ENSLACG00000019064	r3hdm2	100	70.191	Latimeria_chalumnae
ENSSHAG00000003511	R3HDM2	99	71.744	ENSLOCG00000005976	r3hdm2	100	66.137	Lepisosteus_oculatus
ENSSHAG00000003511	R3HDM2	100	86.679	ENSLAFG00000006510	R3HDM2	100	86.679	Loxodonta_africana
ENSSHAG00000003511	R3HDM2	99	91.487	ENSMFAG00000036385	R3HDM2	100	86.476	Macaca_fascicularis
ENSSHAG00000003511	R3HDM2	99	91.487	ENSMMUG00000021789	R3HDM2	100	87.810	Macaca_mulatta
ENSSHAG00000003511	R3HDM2	99	91.383	ENSMNEG00000025314	R3HDM2	100	86.394	Macaca_nemestrina
ENSSHAG00000003511	R3HDM2	99	91.591	ENSMLEG00000028915	R3HDM2	100	86.559	Mandrillus_leucophaeus
ENSSHAG00000003511	R3HDM2	99	62.919	ENSMAMG00000009793	r3hdm2	99	63.085	Mastacembelus_armatus
ENSSHAG00000003511	R3HDM2	60	37.234	ENSMAMG00000011755	-	88	37.942	Mastacembelus_armatus
ENSSHAG00000003511	R3HDM2	99	64.355	ENSMZEG00005007319	r3hdm2	99	64.114	Maylandia_zebra
ENSSHAG00000003511	R3HDM2	99	91.525	ENSMICG00000012389	R3HDM2	100	84.725	Microcebus_murinus
ENSSHAG00000003511	R3HDM2	99	89.330	ENSMOCG00000014425	R3hdm2	100	85.810	Microtus_ochrogaster
ENSSHAG00000003511	R3HDM2	94	65.505	ENSMMOG00000007448	r3hdm2	99	59.625	Mola_mola
ENSSHAG00000003511	R3HDM2	94	61.790	ENSMALG00000010211	r3hdm2	98	54.692	Monopterus_albus
ENSSHAG00000003511	R3HDM2	99	89.694	MGP_CAROLIEiJ_G0015896	R3hdm2	100	86.217	Mus_caroli
ENSSHAG00000003511	R3HDM2	99	89.796	ENSMUSG00000025404	R3hdm2	100	86.299	Mus_musculus
ENSSHAG00000003511	R3HDM2	99	90.216	MGP_PahariEiJ_G0031189	R3hdm2	100	86.737	Mus_pahari
ENSSHAG00000003511	R3HDM2	99	89.367	MGP_SPRETEiJ_G0016722	R3hdm2	100	85.945	Mus_spretus
ENSSHAG00000003511	R3HDM2	98	86.157	ENSMPUG00000001818	R3HDM2	98	85.851	Mustela_putorius_furo
ENSSHAG00000003511	R3HDM2	100	87.321	ENSMLUG00000004980	R3HDM2	100	87.321	Myotis_lucifugus
ENSSHAG00000003511	R3HDM2	99	91.002	ENSNGAG00000018800	R3hdm2	100	87.488	Nannospalax_galili
ENSSHAG00000003511	R3HDM2	93	64.741	ENSNBRG00000004483	r3hdm2	99	59.703	Neolamprologus_brichardi
ENSSHAG00000003511	R3HDM2	99	91.695	ENSNLEG00000017351	R3HDM2	100	86.641	Nomascus_leucogenys
ENSSHAG00000003511	R3HDM2	97	86.778	ENSMEUG00000008588	R3HDM2	100	82.838	Notamacropus_eugenii
ENSSHAG00000003511	R3HDM2	99	78.643	ENSOPRG00000013670	R3HDM2	100	75.048	Ochotona_princeps
ENSSHAG00000003511	R3HDM2	99	65.932	ENSONIG00000005075	r3hdm2	99	61.387	Oreochromis_niloticus
ENSSHAG00000003511	R3HDM2	64	36.522	ENSONIG00000002315	-	77	38.609	Oreochromis_niloticus
ENSSHAG00000003511	R3HDM2	100	87.393	ENSOCUG00000013258	R3HDM2	100	87.393	Oryctolagus_cuniculus
ENSSHAG00000003511	R3HDM2	99	64.602	ENSORLG00000005502	r3hdm2	99	61.700	Oryzias_latipes
ENSSHAG00000003511	R3HDM2	99	62.798	ENSORLG00020017069	r3hdm2	99	61.700	Oryzias_latipes_hni
ENSSHAG00000003511	R3HDM2	99	62.907	ENSORLG00015012735	r3hdm2	99	61.792	Oryzias_latipes_hsok
ENSSHAG00000003511	R3HDM2	52	35.940	ENSORLG00015011568	-	57	50.877	Oryzias_latipes_hsok
ENSSHAG00000003511	R3HDM2	62	34.436	ENSOMEG00000009631	-	82	34.576	Oryzias_melastigma
ENSSHAG00000003511	R3HDM2	98	60.586	ENSOMEG00000018079	r3hdm2	99	56.285	Oryzias_melastigma
ENSSHAG00000003511	R3HDM2	62	34.436	ENSOMEG00000016256	-	82	34.576	Oryzias_melastigma
ENSSHAG00000003511	R3HDM2	100	84.206	ENSOGAG00000012055	R3HDM2	100	84.396	Otolemur_garnettii
ENSSHAG00000003511	R3HDM2	99	80.114	ENSOGAG00000027966	-	92	79.771	Otolemur_garnettii
ENSSHAG00000003511	R3HDM2	99	90.919	ENSOARG00000006929	R3HDM2	100	82.667	Ovis_aries
ENSSHAG00000003511	R3HDM2	99	91.705	ENSPPAG00000034395	R3HDM2	100	86.654	Pan_paniscus
ENSSHAG00000003511	R3HDM2	99	91.600	ENSPPRG00000009240	R3HDM2	100	84.857	Panthera_pardus
ENSSHAG00000003511	R3HDM2	99	91.600	ENSPTIG00000008752	R3HDM2	100	84.857	Panthera_tigris_altaica
ENSSHAG00000003511	R3HDM2	99	91.600	ENSPTRG00000046457	R3HDM2	100	86.571	Pan_troglodytes
ENSSHAG00000003511	R3HDM2	98	90.023	ENSPANG00000024002	R3HDM2	100	83.414	Papio_anubis
ENSSHAG00000003511	R3HDM2	94	66.892	ENSPKIG00000003171	r3hdm2	99	64.407	Paramormyrops_kingsleyae
ENSSHAG00000003511	R3HDM2	71	72.969	ENSPSIG00000006954	R3HDM2	100	72.050	Pelodiscus_sinensis
ENSSHAG00000003511	R3HDM2	92	69.024	ENSPMGG00000007061	r3hdm2	99	61.934	Periophthalmus_magnuspinnatus
ENSSHAG00000003511	R3HDM2	99	88.965	ENSPEMG00000015964	R3hdm2	100	85.592	Peromyscus_maniculatus_bairdii
ENSSHAG00000003511	R3HDM2	99	96.918	ENSPCIG00000023841	R3HDM2	100	88.804	Phascolarctos_cinereus
ENSSHAG00000003511	R3HDM2	93	69.792	ENSPFOG00000006077	r3hdm2	98	60.432	Poecilia_formosa
ENSSHAG00000003511	R3HDM2	99	64.978	ENSPLAG00000002971	r3hdm2	99	61.773	Poecilia_latipinna
ENSSHAG00000003511	R3HDM2	99	64.978	ENSPMEG00000005330	r3hdm2	99	61.773	Poecilia_mexicana
ENSSHAG00000003511	R3HDM2	99	64.868	ENSPREG00000008424	r3hdm2	99	63.527	Poecilia_reticulata
ENSSHAG00000003511	R3HDM2	99	82.927	ENSPPYG00000004685	R3HDM2	81	78.412	Pongo_abelii
ENSSHAG00000003511	R3HDM2	86	91.176	ENSPCAG00000014642	R3HDM2	100	78.147	Procavia_capensis
ENSSHAG00000003511	R3HDM2	99	91.941	ENSPCOG00000013201	R3HDM2	100	85.048	Propithecus_coquereli
ENSSHAG00000003511	R3HDM2	100	87.679	ENSPVAG00000003967	R3HDM2	100	87.870	Pteropus_vampyrus
ENSSHAG00000003511	R3HDM2	92	64.361	ENSPNYG00000013479	r3hdm2	100	59.921	Pundamilia_nyererei
ENSSHAG00000003511	R3HDM2	99	61.305	ENSPNAG00000017473	r3hdm2	99	62.271	Pygocentrus_nattereri
ENSSHAG00000003511	R3HDM2	99	89.015	ENSRNOG00000007801	R3hdm2	100	85.551	Rattus_norvegicus
ENSSHAG00000003511	R3HDM2	99	88.623	ENSRBIG00000037403	R3HDM2	100	82.061	Rhinopithecus_bieti
ENSSHAG00000003511	R3HDM2	99	91.581	ENSRROG00000022271	R3HDM2	100	86.546	Rhinopithecus_roxellana
ENSSHAG00000003511	R3HDM2	99	91.913	ENSSBOG00000023547	R3HDM2	100	85.100	Saimiri_boliviensis_boliviensis
ENSSHAG00000003511	R3HDM2	93	70.602	ENSSFOG00015011219	r3hdm2	99	63.137	Scleropages_formosus
ENSSHAG00000003511	R3HDM2	53	36.364	ENSSMAG00000010735	-	83	37.884	Scophthalmus_maximus
ENSSHAG00000003511	R3HDM2	99	65.033	ENSSMAG00000012073	r3hdm2	99	63.173	Scophthalmus_maximus
ENSSHAG00000003511	R3HDM2	62	36.364	ENSSDUG00000009188	-	84	35.863	Seriola_dumerili
ENSSHAG00000003511	R3HDM2	99	65.673	ENSSDUG00000019269	r3hdm2	99	62.142	Seriola_dumerili
ENSSHAG00000003511	R3HDM2	99	63.774	ENSSLDG00000005252	r3hdm2	99	64.107	Seriola_lalandi_dorsalis
ENSSHAG00000003511	R3HDM2	92	83.333	ENSSARG00000003958	R3HDM2	94	77.555	Sorex_araneus
ENSSHAG00000003511	R3HDM2	98	81.348	ENSSPUG00000014132	R3HDM2	100	72.207	Sphenodon_punctatus
ENSSHAG00000003511	R3HDM2	67	36.501	ENSSPAG00000016856	-	94	35.744	Stegastes_partitus
ENSSHAG00000003511	R3HDM2	99	65.743	ENSSPAG00000022594	r3hdm2	99	61.900	Stegastes_partitus
ENSSHAG00000003511	R3HDM2	99	91.800	ENSSSCG00000026498	R3HDM2	100	87.001	Sus_scrofa
ENSSHAG00000003511	R3HDM2	81	76.409	ENSTGUG00000015881	R3HDM2	100	80.339	Taeniopygia_guttata
ENSSHAG00000003511	R3HDM2	94	63.325	ENSTRUG00000015075	r3hdm2	99	58.121	Takifugu_rubripes
ENSSHAG00000003511	R3HDM2	87	81.609	ENSTNIG00000007057	r3hdm2	88	82.184	Tetraodon_nigroviridis
ENSSHAG00000003511	R3HDM2	77	88.166	ENSTBEG00000015967	R3HDM2	81	77.448	Tupaia_belangeri
ENSSHAG00000003511	R3HDM2	96	87.931	ENSTTRG00000013082	R3HDM2	95	80.512	Tursiops_truncatus
ENSSHAG00000003511	R3HDM2	99	91.373	ENSUAMG00000020913	R3HDM2	100	86.095	Ursus_americanus
ENSSHAG00000003511	R3HDM2	99	84.824	ENSUMAG00000019179	R3HDM2	100	82.493	Ursus_maritimus
ENSSHAG00000003511	R3HDM2	100	81.888	ENSVPAG00000008656	R3HDM2	100	81.888	Vicugna_pacos
ENSSHAG00000003511	R3HDM2	99	91.600	ENSVVUG00000018014	R3HDM2	97	87.294	Vulpes_vulpes
ENSSHAG00000003511	R3HDM2	99	74.744	ENSXETG00000017153	r3hdm2	100	71.307	Xenopus_tropicalis
ENSSHAG00000003511	R3HDM2	84	63.885	ENSXCOG00000013882	r3hdm2	100	57.128	Xiphophorus_couchianus
ENSSHAG00000003511	R3HDM2	68	34.551	ENSXMAG00000002994	-	92	35.151	Xiphophorus_maculatus
ENSSHAG00000003511	R3HDM2	99	63.341	ENSXMAG00000017978	r3hdm2	99	63.712	Xiphophorus_maculatus