EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000003514 (Gene tree)
Gene ID: 100923920
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 35022 bases
Position: chrGL841171.1:65542-100563
Accession: 17882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000003989	RRM_1	PF00076.22	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004029	SREK1-201	5018	-	ENSSHAP00000003989	497 (aa)	-	G3VLD4

Gene Model

Click here to download ENSSHAG00000003514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003514	SREK1	100	80.431	ENSG00000153914	SREK1	100	97.368	Homo_sapiens
ENSSHAG00000003514	SREK1	100	80.583	ENSAMEG00000011327	SREK1	82	81.481	Ailuropoda_melanoleuca
ENSSHAG00000003514	SREK1	50	89.243	ENSAPLG00000003948	-	62	89.516	Anas_platyrhynchos
ENSSHAG00000003514	SREK1	100	81.238	ENSANAG00000031358	SREK1	92	98.883	Aotus_nancymaae
ENSSHAG00000003514	SREK1	56	94.203	ENSBTAG00000007321	SREK1	82	81.818	Bos_taurus
ENSSHAG00000003514	SREK1	100	81.238	ENSCJAG00000015950	SREK1	92	98.883	Callithrix_jacchus
ENSSHAG00000003514	SREK1	100	81.092	ENSCAFG00000007560	SREK1	100	81.018	Canis_familiaris
ENSSHAG00000003514	SREK1	100	79.497	ENSTSYG00000036957	SREK1	92	96.703	Carlito_syrichta
ENSSHAG00000003514	SREK1	80	89.109	ENSCPOG00000008925	SREK1	79	72.200	Cavia_porcellus
ENSSHAG00000003514	SREK1	100	81.238	ENSCCAG00000020591	SREK1	100	81.165	Cebus_capucinus
ENSSHAG00000003514	SREK1	100	81.676	ENSCATG00000031482	SREK1	92	98.883	Cercocebus_atys
ENSSHAG00000003514	SREK1	100	81.600	ENSCLAG00000005024	SREK1	100	80.702	Chinchilla_lanigera
ENSSHAG00000003514	SREK1	100	81.676	ENSCANG00000030421	SREK1	92	98.883	Colobus_angolensis_palliatus
ENSSHAG00000003514	SREK1	100	77.246	ENSCGRG00001015222	-	81	78.044	Cricetulus_griseus_chok1gshd
ENSSHAG00000003514	SREK1	100	77.246	ENSCGRG00000002130	-	81	78.044	Cricetulus_griseus_crigri
ENSSHAG00000003514	SREK1	100	79.532	ENSFCAG00000040658	-	100	81.605	Felis_catus
ENSSHAG00000003514	SREK1	100	65.954	ENSFALG00000009835	SREK1	83	65.893	Ficedula_albicollis
ENSSHAG00000003514	SREK1	100	82.341	ENSFDAG00000017844	SREK1	100	80.507	Fukomys_damarensis
ENSSHAG00000003514	SREK1	61	93.725	ENSGAGG00000006087	SREK1	70	94.332	Gopherus_agassizii
ENSSHAG00000003514	SREK1	100	81.287	ENSGGOG00000004737	SREK1	92	98.883	Gorilla_gorilla
ENSSHAG00000003514	SREK1	100	79.400	ENSHGLG00000001181	SREK1	100	81.092	Heterocephalus_glaber_female
ENSSHAG00000003514	SREK1	100	81.548	ENSSTOG00000008850	SREK1	100	80.507	Ictidomys_tridecemlineatus
ENSSHAG00000003514	SREK1	100	81.400	ENSLAFG00000013853	SREK1	81	80.677	Loxodonta_africana
ENSSHAG00000003514	SREK1	100	81.676	ENSMFAG00000039823	SREK1	92	98.883	Macaca_fascicularis
ENSSHAG00000003514	SREK1	100	81.676	ENSMMUG00000014586	SREK1	100	81.409	Macaca_mulatta
ENSSHAG00000003514	SREK1	100	81.676	ENSMNEG00000030723	SREK1	92	98.883	Macaca_nemestrina
ENSSHAG00000003514	SREK1	100	81.871	ENSMLEG00000039078	SREK1	92	98.883	Mandrillus_leucophaeus
ENSSHAG00000003514	SREK1	100	77.046	ENSMAUG00000010066	-	100	83.540	Mesocricetus_auratus
ENSSHAG00000003514	SREK1	100	81.044	ENSMICG00000034959	SREK1	92	98.883	Microcebus_murinus
ENSSHAG00000003514	SREK1	99	78.112	ENSMOCG00000001536	-	100	85.404	Microtus_ochrogaster
ENSSHAG00000003514	SREK1	100	96.781	ENSMODG00000019665	SREK1	81	96.781	Monodelphis_domestica
ENSSHAG00000003514	SREK1	100	80.507	ENSMPUG00000014736	SREK1	81	81.409	Mustela_putorius_furo
ENSSHAG00000003514	SREK1	100	81.871	ENSNLEG00000003827	SREK1	100	81.605	Nomascus_leucogenys
ENSSHAG00000003514	SREK1	88	80.549	ENSOPRG00000012111	SREK1	64	82.682	Ochotona_princeps
ENSSHAG00000003514	SREK1	52	92.045	ENSODEG00000016450	SREK1	100	78.088	Octodon_degus
ENSSHAG00000003514	SREK1	80	80.050	ENSOANG00000005029	SREK1	77	80.886	Ornithorhynchus_anatinus
ENSSHAG00000003514	SREK1	100	80.512	ENSOCUG00000001319	SREK1	81	80.237	Oryctolagus_cuniculus
ENSSHAG00000003514	SREK1	100	80.990	ENSOGAG00000016463	SREK1	100	82.306	Otolemur_garnettii
ENSSHAG00000003514	SREK1	56	94.203	ENSOARG00000006005	SREK1	82	81.431	Ovis_aries
ENSSHAG00000003514	SREK1	100	73.099	ENSPPAG00000031605	SREK1	92	98.883	Pan_paniscus
ENSSHAG00000003514	SREK1	100	81.800	ENSPPRG00000024617	SREK1	100	82.515	Panthera_pardus
ENSSHAG00000003514	SREK1	100	78.752	ENSPTIG00000006608	SREK1	81	81.409	Panthera_tigris_altaica
ENSSHAG00000003514	SREK1	100	81.481	ENSPTRG00000016936	SREK1	92	98.883	Pan_troglodytes
ENSSHAG00000003514	SREK1	100	81.676	ENSPANG00000008953	SREK1	92	98.883	Papio_anubis
ENSSHAG00000003514	SREK1	100	77.645	ENSPEMG00000024051	-	95	87.879	Peromyscus_maniculatus_bairdii
ENSSHAG00000003514	SREK1	100	81.871	ENSPPYG00000015515	SREK1	81	81.605	Pongo_abelii
ENSSHAG00000003514	SREK1	51	92.549	ENSPCAG00000004955	SREK1	86	76.423	Procavia_capensis
ENSSHAG00000003514	SREK1	100	81.044	ENSPCOG00000026230	SREK1	92	98.883	Propithecus_coquereli
ENSSHAG00000003514	SREK1	55	93.455	ENSPVAG00000009763	SREK1	82	80.388	Pteropus_vampyrus
ENSSHAG00000003514	SREK1	100	78.270	ENSRBIG00000033818	SREK1	92	96.196	Rhinopithecus_bieti
ENSSHAG00000003514	SREK1	100	81.676	ENSRROG00000017210	SREK1	92	98.883	Rhinopithecus_roxellana
ENSSHAG00000003514	SREK1	100	81.818	ENSSBOG00000031230	SREK1	92	98.883	Saimiri_boliviensis_boliviensis
ENSSHAG00000003514	SREK1	69	95.547	ENSSARG00000000795	SREK1	58	95.547	Sorex_araneus
ENSSHAG00000003514	SREK1	56	93.841	ENSSSCG00000032726	SREK1	100	79.612	Sus_scrofa
ENSSHAG00000003514	SREK1	100	72.832	ENSTGUG00000002935	SREK1	100	71.820	Taeniopygia_guttata
ENSSHAG00000003514	SREK1	56	94.203	ENSTTRG00000009684	SREK1	89	80.194	Tursiops_truncatus
ENSSHAG00000003514	SREK1	100	77.886	ENSUMAG00000008191	SREK1	81	81.409	Ursus_maritimus
ENSSHAG00000003514	SREK1	100	80.117	ENSVPAG00000008654	SREK1	89	81.213	Vicugna_pacos
ENSSHAG00000003514	SREK1	86	56.889	ENSXETG00000021460	srek1	64	54.354	Xenopus_tropicalis