EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000003681 (Gene tree)
Gene ID: 100926262
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 16076 bases
Position: chrGL867760.1:70947-87022
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000004178	RRM_1	PF00076.22	2.7e-24	1	1
ENSSHAP00000004177	RRM_1	PF00076.22	3.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004219	CSTF2-202	1890	-	ENSSHAP00000004178	628 (aa)	-	G3VLX3
ENSSHAT00000004218	CSTF2-201	2292	-	ENSSHAP00000004177	604 (aa)	-	G3VLX2

Gene Model

Click here to download ENSSHAG00000003681's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003681	CSTF2	92	83.305	ENSG00000101811	CSTF2	98	100.000	Homo_sapiens
ENSSHAG00000003681	CSTF2	77	85.590	ENSAPOG00000005630	cstf2	86	82.692	Acanthochromis_polyacanthus
ENSSHAG00000003681	CSTF2	92	82.823	ENSAMEG00000002082	CSTF2	97	79.932	Ailuropoda_melanoleuca
ENSSHAG00000003681	CSTF2	83	82.692	ENSACIG00000012852	cstf2	88	82.692	Amphilophus_citrinellus
ENSSHAG00000003681	CSTF2	77	83.761	ENSAOCG00000020905	cstf2	86	82.692	Amphiprion_ocellaris
ENSSHAG00000003681	CSTF2	77	84.716	ENSAPEG00000006526	cstf2	86	82.692	Amphiprion_percula
ENSSHAG00000003681	CSTF2	73	84.483	ENSATEG00000018186	cstf2	86	82.692	Anabas_testudineus
ENSSHAG00000003681	CSTF2	92	80.069	ENSAPLG00000007255	CSTF2	97	78.741	Anas_platyrhynchos
ENSSHAG00000003681	CSTF2	92	82.444	ENSANAG00000022342	CSTF2	95	100.000	Aotus_nancymaae
ENSSHAG00000003681	CSTF2	73	86.207	ENSACLG00000000779	cstf2	83	84.615	Astatotilapia_calliptera
ENSSHAG00000003681	CSTF2	82	84.188	ENSAMXG00000021477	cstf2	92	98.000	Astyanax_mexicanus
ENSSHAG00000003681	CSTF2	92	83.333	ENSBTAG00000003547	CSTF2	95	100.000	Bos_taurus
ENSSHAG00000003681	CSTF2	92	83.160	ENSCJAG00000004422	CSTF2	98	100.000	Callithrix_jacchus
ENSSHAG00000003681	CSTF2	92	80.207	ENSCAFG00000017551	CSTF2	99	84.615	Canis_familiaris
ENSSHAG00000003681	CSTF2	87	89.744	ENSCAFG00020007619	CSTF2	99	84.615	Canis_lupus_dingo
ENSSHAG00000003681	CSTF2	92	83.333	ENSCHIG00000016994	CSTF2	95	100.000	Capra_hircus
ENSSHAG00000003681	CSTF2	92	84.028	ENSTSYG00000006529	CSTF2	94	100.000	Carlito_syrichta
ENSSHAG00000003681	CSTF2	92	82.616	ENSCPOG00000015255	CSTF2	94	100.000	Cavia_porcellus
ENSSHAG00000003681	CSTF2	92	83.160	ENSCCAG00000032975	CSTF2	98	100.000	Cebus_capucinus
ENSSHAG00000003681	CSTF2	92	83.305	ENSCATG00000022835	CSTF2	98	100.000	Cercocebus_atys
ENSSHAG00000003681	CSTF2	92	82.444	ENSCLAG00000001904	CSTF2	87	93.750	Chinchilla_lanigera
ENSSHAG00000003681	CSTF2	92	83.305	ENSCSAG00000010360	CSTF2	98	100.000	Chlorocebus_sabaeus
ENSSHAG00000003681	CSTF2	62	97.484	ENSCHOG00000012803	CSTF2	75	97.484	Choloepus_hoffmanni
ENSSHAG00000003681	CSTF2	99	69.310	ENSCPBG00000014293	CSTF2	97	75.279	Chrysemys_picta_bellii
ENSSHAG00000003681	CSTF2	92	83.305	ENSCANG00000030612	CSTF2	98	100.000	Colobus_angolensis_palliatus
ENSSHAG00000003681	CSTF2	92	77.568	ENSCGRG00001023023	Cstf2	95	98.214	Cricetulus_griseus_chok1gshd
ENSSHAG00000003681	CSTF2	92	77.797	ENSCGRG00000003897	Cstf2	95	98.214	Cricetulus_griseus_crigri
ENSSHAG00000003681	CSTF2	77	86.099	ENSCVAG00000005731	cstf2	86	82.692	Cyprinodon_variegatus
ENSSHAG00000003681	CSTF2	67	97.826	ENSDARG00000090788	cstf2	92	97.826	Danio_rerio
ENSSHAG00000003681	CSTF2	86	91.429	ENSDORG00000007195	Cstf2	95	98.214	Dipodomys_ordii
ENSSHAG00000003681	CSTF2	68	94.286	ENSETEG00000004931	CSTF2	63	100.000	Echinops_telfairi
ENSSHAG00000003681	CSTF2	92	83.477	ENSEASG00005001216	CSTF2	95	100.000	Equus_asinus_asinus
ENSSHAG00000003681	CSTF2	92	83.477	ENSECAG00000009325	CSTF2	95	100.000	Equus_caballus
ENSSHAG00000003681	CSTF2	87	89.744	ENSFCAG00000007000	CSTF2	99	84.615	Felis_catus
ENSSHAG00000003681	CSTF2	88	78.648	ENSFALG00000003859	CSTF2	100	78.648	Ficedula_albicollis
ENSSHAG00000003681	CSTF2	99	72.841	ENSFDAG00000002416	CSTF2	95	100.000	Fukomys_damarensis
ENSSHAG00000003681	CSTF2	77	84.649	ENSFHEG00000017065	cstf2	85	87.805	Fundulus_heteroclitus
ENSSHAG00000003681	CSTF2	76	79.358	ENSGMOG00000005145	cstf2	91	83.673	Gadus_morhua
ENSSHAG00000003681	CSTF2	86	94.030	ENSGALG00000006760	CSTF2	96	84.698	Gallus_gallus
ENSSHAG00000003681	CSTF2	84	84.483	ENSGAFG00000020027	cstf2	86	82.692	Gambusia_affinis
ENSSHAG00000003681	CSTF2	72	84.615	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSSHAG00000003681	CSTF2	99	71.278	ENSGAGG00000006037	CSTF2	97	76.661	Gopherus_agassizii
ENSSHAG00000003681	CSTF2	92	83.305	ENSGGOG00000022267	CSTF2	98	100.000	Gorilla_gorilla
ENSSHAG00000003681	CSTF2	73	86.207	ENSHBUG00000016183	cstf2	83	84.615	Haplochromis_burtoni
ENSSHAG00000003681	CSTF2	99	72.998	ENSHGLG00000000659	-	94	100.000	Heterocephalus_glaber_female
ENSSHAG00000003681	CSTF2	93	69.565	ENSHGLG00000013455	-	97	68.685	Heterocephalus_glaber_female
ENSSHAG00000003681	CSTF2	93	69.739	ENSHGLG00100015391	-	97	68.858	Heterocephalus_glaber_male
ENSSHAG00000003681	CSTF2	99	72.998	ENSHGLG00100001130	-	94	100.000	Heterocephalus_glaber_male
ENSSHAG00000003681	CSTF2	83	87.273	ENSHCOG00000005157	cstf2	86	88.235	Hippocampus_comes
ENSSHAG00000003681	CSTF2	71	85.714	ENSIPUG00000017839	cstf2	90	85.714	Ictalurus_punctatus
ENSSHAG00000003681	CSTF2	92	80.382	ENSSTOG00000023445	CSTF2	87	93.711	Ictidomys_tridecemlineatus
ENSSHAG00000003681	CSTF2	90	94.203	ENSJJAG00000020507	Cstf2	97	100.000	Jaculus_jaculus
ENSSHAG00000003681	CSTF2	92	65.894	ENSLACG00000015927	CSTF2	97	64.559	Latimeria_chalumnae
ENSSHAG00000003681	CSTF2	87	80.882	ENSLOCG00000015300	cstf2	83	90.196	Lepisosteus_oculatus
ENSSHAG00000003681	CSTF2	87	100.000	ENSLAFG00000000474	CSTF2	97	100.000	Loxodonta_africana
ENSSHAG00000003681	CSTF2	92	83.305	ENSMFAG00000043888	CSTF2	98	100.000	Macaca_fascicularis
ENSSHAG00000003681	CSTF2	92	84.055	ENSMMUG00000013008	CSTF2	98	100.000	Macaca_mulatta
ENSSHAG00000003681	CSTF2	92	83.854	ENSMNEG00000041824	CSTF2	98	100.000	Macaca_nemestrina
ENSSHAG00000003681	CSTF2	92	83.305	ENSMLEG00000036870	CSTF2	98	100.000	Mandrillus_leucophaeus
ENSSHAG00000003681	CSTF2	77	85.714	ENSMAMG00000020364	cstf2	86	83.673	Mastacembelus_armatus
ENSSHAG00000003681	CSTF2	73	86.207	ENSMZEG00005007200	cstf2	86	84.615	Maylandia_zebra
ENSSHAG00000003681	CSTF2	88	91.429	ENSMGAG00000004139	CSTF2	100	84.861	Meleagris_gallopavo
ENSSHAG00000003681	CSTF2	99	70.846	ENSMAUG00000000965	Cstf2	95	98.214	Mesocricetus_auratus
ENSSHAG00000003681	CSTF2	92	84.722	ENSMICG00000014121	CSTF2	95	100.000	Microcebus_murinus
ENSSHAG00000003681	CSTF2	92	77.375	ENSMOCG00000008081	Cstf2	95	98.214	Microtus_ochrogaster
ENSSHAG00000003681	CSTF2	80	89.474	ENSMMOG00000000538	cstf2	94	90.000	Mola_mola
ENSSHAG00000003681	CSTF2	92	93.673	ENSMODG00000011785	CSTF2	97	94.200	Monodelphis_domestica
ENSSHAG00000003681	CSTF2	92	77.226	MGP_CAROLIEiJ_G0033383	Cstf2	96	98.214	Mus_caroli
ENSSHAG00000003681	CSTF2	92	77.226	ENSMUSG00000031256	Cstf2	95	98.214	Mus_musculus
ENSSHAG00000003681	CSTF2	92	77.187	MGP_PahariEiJ_G0031923	Cstf2	96	98.214	Mus_pahari
ENSSHAG00000003681	CSTF2	92	77.226	MGP_SPRETEiJ_G0034548	Cstf2	96	98.214	Mus_spretus
ENSSHAG00000003681	CSTF2	92	79.705	ENSMPUG00000002339	CSTF2	97	77.087	Mustela_putorius_furo
ENSSHAG00000003681	CSTF2	92	78.852	ENSMLUG00000004598	CSTF2	95	77.049	Myotis_lucifugus
ENSSHAG00000003681	CSTF2	92	77.702	ENSNGAG00000021985	Cstf2	98	98.039	Nannospalax_galili
ENSSHAG00000003681	CSTF2	67	91.176	ENSNBRG00000021694	cstf2	93	91.667	Neolamprologus_brichardi
ENSSHAG00000003681	CSTF2	92	83.133	ENSNLEG00000007510	CSTF2	98	100.000	Nomascus_leucogenys
ENSSHAG00000003681	CSTF2	92	93.333	ENSMEUG00000011186	-	97	93.333	Notamacropus_eugenii
ENSSHAG00000003681	CSTF2	87	91.969	ENSMEUG00000014025	-	100	91.969	Notamacropus_eugenii
ENSSHAG00000003681	CSTF2	92	88.468	ENSMEUG00000007875	-	97	88.468	Notamacropus_eugenii
ENSSHAG00000003681	CSTF2	64	100.000	ENSOPRG00000003106	CSTF2	75	100.000	Ochotona_princeps
ENSSHAG00000003681	CSTF2	92	79.518	ENSODEG00000002059	CSTF2	97	100.000	Octodon_degus
ENSSHAG00000003681	CSTF2	92	59.446	ENSONIG00000002631	cstf2	80	84.615	Oreochromis_niloticus
ENSSHAG00000003681	CSTF2	98	73.396	ENSOANG00000004208	CSTF2	85	98.214	Ornithorhynchus_anatinus
ENSSHAG00000003681	CSTF2	87	94.286	ENSOCUG00000010468	CSTF2	98	100.000	Oryctolagus_cuniculus
ENSSHAG00000003681	CSTF2	76	83.628	ENSORLG00000001380	cstf2	86	83.673	Oryzias_latipes
ENSSHAG00000003681	CSTF2	76	84.071	ENSORLG00020021917	cstf2	86	83.673	Oryzias_latipes_hni
ENSSHAG00000003681	CSTF2	76	83.628	ENSORLG00015011996	cstf2	86	83.673	Oryzias_latipes_hsok
ENSSHAG00000003681	CSTF2	77	84.052	ENSOMEG00000015507	cstf2	76	66.983	Oryzias_melastigma
ENSSHAG00000003681	CSTF2	87	89.744	ENSOGAG00000011192	CSTF2	99	84.615	Otolemur_garnettii
ENSSHAG00000003681	CSTF2	92	83.045	ENSOARG00000001022	CSTF2	95	100.000	Ovis_aries
ENSSHAG00000003681	CSTF2	92	83.305	ENSPPAG00000031804	CSTF2	98	100.000	Pan_paniscus
ENSSHAG00000003681	CSTF2	87	89.744	ENSPPRG00000022492	CSTF2	99	84.615	Panthera_pardus
ENSSHAG00000003681	CSTF2	87	89.744	ENSPTIG00000009922	CSTF2	99	84.615	Panthera_tigris_altaica
ENSSHAG00000003681	CSTF2	92	83.305	ENSPTRG00000022090	CSTF2	98	100.000	Pan_troglodytes
ENSSHAG00000003681	CSTF2	92	83.305	ENSPANG00000002303	CSTF2	98	100.000	Papio_anubis
ENSSHAG00000003681	CSTF2	83	88.462	ENSPKIG00000005033	cstf2	89	88.235	Paramormyrops_kingsleyae
ENSSHAG00000003681	CSTF2	77	84.716	ENSPMGG00000006534	cstf2	88	80.769	Periophthalmus_magnuspinnatus
ENSSHAG00000003681	CSTF2	87	85.897	ENSPEMG00000019415	Cstf2	94	98.039	Peromyscus_maniculatus_bairdii
ENSSHAG00000003681	CSTF2	92	98.022	ENSPCIG00000002989	CSTF2	97	95.782	Phascolarctos_cinereus
ENSSHAG00000003681	CSTF2	78	83.913	ENSPLAG00000011176	cstf2	86	82.692	Poecilia_latipinna
ENSSHAG00000003681	CSTF2	78	83.913	ENSPMEG00000017743	cstf2	86	82.692	Poecilia_mexicana
ENSSHAG00000003681	CSTF2	62	84.483	ENSPREG00000011481	cstf2	87	82.692	Poecilia_reticulata
ENSSHAG00000003681	CSTF2	92	83.133	ENSPPYG00000020541	CSTF2	98	100.000	Pongo_abelii
ENSSHAG00000003681	CSTF2	92	84.201	ENSPCOG00000027744	CSTF2	94	100.000	Propithecus_coquereli
ENSSHAG00000003681	CSTF2	92	67.759	ENSPVAG00000008342	CSTF2	96	100.000	Pteropus_vampyrus
ENSSHAG00000003681	CSTF2	76	85.714	ENSPNYG00000010852	cstf2	90	90.000	Pundamilia_nyererei
ENSSHAG00000003681	CSTF2	92	63.475	ENSPNAG00000018887	cstf2	91	84.000	Pygocentrus_nattereri
ENSSHAG00000003681	CSTF2	92	77.720	ENSRNOG00000048025	Cstf2	95	98.214	Rattus_norvegicus
ENSSHAG00000003681	CSTF2	99	73.418	ENSRBIG00000030745	CSTF2	93	100.000	Rhinopithecus_bieti
ENSSHAG00000003681	CSTF2	92	83.305	ENSRROG00000045042	CSTF2	98	100.000	Rhinopithecus_roxellana
ENSSHAG00000003681	CSTF2	92	82.986	ENSSBOG00000021649	CSTF2	98	100.000	Saimiri_boliviensis_boliviensis
ENSSHAG00000003681	CSTF2	77	89.831	ENSSFOG00015006348	cstf2	88	90.196	Scleropages_formosus
ENSSHAG00000003681	CSTF2	72	84.906	ENSSMAG00000013463	cstf2	86	83.673	Scophthalmus_maximus
ENSSHAG00000003681	CSTF2	79	90.000	ENSSPUG00000005288	-	96	86.331	Sphenodon_punctatus
ENSSHAG00000003681	CSTF2	87	89.744	ENSSSCG00000012486	CSTF2	94	100.000	Sus_scrofa
ENSSHAG00000003681	CSTF2	92	76.988	ENSTGUG00000002253	CSTF2	97	76.142	Taeniopygia_guttata
ENSSHAG00000003681	CSTF2	72	85.965	ENSTNIG00000016860	cstf2	89	84.314	Tetraodon_nigroviridis
ENSSHAG00000003681	CSTF2	53	100.000	ENSTBEG00000010029	-	58	100.000	Tupaia_belangeri
ENSSHAG00000003681	CSTF2	92	80.207	ENSTTRG00000013556	CSTF2	95	100.000	Tursiops_truncatus
ENSSHAG00000003681	CSTF2	92	83.106	ENSUAMG00000026605	CSTF2	96	100.000	Ursus_americanus
ENSSHAG00000003681	CSTF2	87	95.714	ENSUMAG00000012417	CSTF2	95	100.000	Ursus_maritimus
ENSSHAG00000003681	CSTF2	68	78.223	ENSVPAG00000006466	CSTF2	67	81.791	Vicugna_pacos
ENSSHAG00000003681	CSTF2	92	79.862	ENSVVUG00000004717	CSTF2	99	84.615	Vulpes_vulpes
ENSSHAG00000003681	CSTF2	88	81.579	ENSXETG00000009642	cstf2	89	96.078	Xenopus_tropicalis
ENSSHAG00000003681	CSTF2	78	60.993	ENSXCOG00000016436	cstf2	81	77.551	Xiphophorus_couchianus
ENSSHAG00000003681	CSTF2	62	86.207	ENSXMAG00000013524	cstf2	87	84.615	Xiphophorus_maculatus