EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000003730 (Gene tree)
Gene ID: 100925419
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 24920 bases
Position: chrGL842306.1:72721-97640
Accession: 100925419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000004233	CPL	PF08144.11	4.4e-53	1	1
ENSSHAP00000004234	CPL	PF08144.11	4.5e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004276	PUM3-202	2106	-	ENSSHAP00000004234	648 (aa)	-	G3VM29
ENSSHAT00000004275	PUM3-201	2334	XM_012544079	ENSSHAP00000004233	724 (aa)	XP_012399533	G3VM28

Gene Model

Click here to download ENSSHAG00000003730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003730	PUM3	99	78.241	ENSG00000080608	PUM3	99	79.933	Homo_sapiens
ENSSHAG00000003730	PUM3	99	53.284	ENSAPOG00000020252	pum3	95	54.602	Acanthochromis_polyacanthus
ENSSHAG00000003730	PUM3	100	78.582	ENSAMEG00000012187	PUM3	100	78.582	Ailuropoda_melanoleuca
ENSSHAG00000003730	PUM3	84	56.284	ENSACIG00000009786	pum3	88	56.792	Amphilophus_citrinellus
ENSSHAG00000003730	PUM3	99	54.030	ENSAOCG00000004439	pum3	95	55.382	Amphiprion_ocellaris
ENSSHAG00000003730	PUM3	99	54.030	ENSAPEG00000020523	pum3	95	55.382	Amphiprion_percula
ENSSHAG00000003730	PUM3	82	61.163	ENSATEG00000005799	pum3	95	55.799	Anabas_testudineus
ENSSHAG00000003730	PUM3	96	69.551	ENSAPLG00000002920	PUM3	100	68.910	Anas_platyrhynchos
ENSSHAG00000003730	PUM3	94	69.307	ENSACAG00000003174	PUM3	99	71.603	Anolis_carolinensis
ENSSHAG00000003730	PUM3	99	78.825	ENSANAG00000024520	PUM3	99	78.825	Aotus_nancymaae
ENSSHAG00000003730	PUM3	99	55.418	ENSACLG00000001017	pum3	96	55.263	Astatotilapia_calliptera
ENSSHAG00000003730	PUM3	99	60.155	ENSAMXG00000020911	pum3	97	60.155	Astyanax_mexicanus
ENSSHAG00000003730	PUM3	100	78.737	ENSBTAG00000013357	PUM3	100	78.737	Bos_taurus
ENSSHAG00000003730	PUM3	75	31.590	WBGene00014165	puf-12	64	31.590	Caenorhabditis_elegans
ENSSHAG00000003730	PUM3	99	78.362	ENSCJAG00000010917	PUM3	99	78.362	Callithrix_jacchus
ENSSHAG00000003730	PUM3	100	79.045	ENSCAFG00000002035	PUM3	99	79.045	Canis_familiaris
ENSSHAG00000003730	PUM3	100	78.891	ENSCAFG00020026867	PUM3	99	78.891	Canis_lupus_dingo
ENSSHAG00000003730	PUM3	100	78.274	ENSCHIG00000021559	PUM3	100	78.274	Capra_hircus
ENSSHAG00000003730	PUM3	100	77.504	ENSTSYG00000007481	PUM3	100	78.824	Carlito_syrichta
ENSSHAG00000003730	PUM3	100	73.620	ENSCAPG00000010592	-	99	73.620	Cavia_aperea
ENSSHAG00000003730	PUM3	100	75.153	ENSCPOG00000008552	-	99	75.153	Cavia_porcellus
ENSSHAG00000003730	PUM3	99	78.207	ENSCCAG00000032650	PUM3	99	79.933	Cebus_capucinus
ENSSHAG00000003730	PUM3	99	79.289	ENSCATG00000024880	PUM3	99	79.289	Cercocebus_atys
ENSSHAG00000003730	PUM3	99	77.538	ENSCLAG00000011892	PUM3	99	79.933	Chinchilla_lanigera
ENSSHAG00000003730	PUM3	99	79.289	ENSCSAG00000008691	PUM3	99	79.289	Chlorocebus_sabaeus
ENSSHAG00000003730	PUM3	100	61.325	ENSCHOG00000002535	PUM3	95	61.325	Choloepus_hoffmanni
ENSSHAG00000003730	PUM3	100	71.605	ENSCPBG00000025470	PUM3	95	72.175	Chrysemys_picta_bellii
ENSSHAG00000003730	PUM3	82	39.677	ENSCING00000024199	-	90	40.278	Ciona_intestinalis
ENSSHAG00000003730	PUM3	82	39.744	ENSCSAVG00000006072	-	99	39.885	Ciona_savignyi
ENSSHAG00000003730	PUM3	99	79.134	ENSCANG00000006142	PUM3	99	79.134	Colobus_angolensis_palliatus
ENSSHAG00000003730	PUM3	100	77.966	ENSCGRG00001016402	Pum3	99	78.182	Cricetulus_griseus_chok1gshd
ENSSHAG00000003730	PUM3	100	77.966	ENSCGRG00000010207	Pum3	99	78.182	Cricetulus_griseus_crigri
ENSSHAG00000003730	PUM3	89	55.574	ENSCSEG00000001565	pum3	99	57.119	Cynoglossus_semilaevis
ENSSHAG00000003730	PUM3	71	50.000	ENSCVAG00000006550	pum3	99	50.000	Cyprinodon_variegatus
ENSSHAG00000003730	PUM3	96	63.826	ENSDARG00000087779	pum3	96	61.154	Danio_rerio
ENSSHAG00000003730	PUM3	100	67.638	ENSDNOG00000008157	PUM3	70	68.000	Dasypus_novemcinctus
ENSSHAG00000003730	PUM3	81	76.471	ENSETEG00000015331	PUM3	82	76.415	Echinops_telfairi
ENSSHAG00000003730	PUM3	81	40.748	ENSEBUG00000011586	pum3	76	41.520	Eptatretus_burgeri
ENSSHAG00000003730	PUM3	99	79.444	ENSEASG00005010350	PUM3	99	79.444	Equus_asinus_asinus
ENSSHAG00000003730	PUM3	99	79.598	ENSECAG00000017193	PUM3	99	79.598	Equus_caballus
ENSSHAG00000003730	PUM3	91	71.986	ENSEEUG00000010314	PUM3	100	72.231	Erinaceus_europaeus
ENSSHAG00000003730	PUM3	99	59.969	ENSELUG00000002215	pum3	97	59.969	Esox_lucius
ENSSHAG00000003730	PUM3	100	69.832	ENSFALG00000010509	PUM3	100	72.727	Ficedula_albicollis
ENSSHAG00000003730	PUM3	100	78.120	ENSFDAG00000021027	PUM3	99	78.120	Fukomys_damarensis
ENSSHAG00000003730	PUM3	98	57.853	ENSFHEG00000015576	pum3	99	57.853	Fundulus_heteroclitus
ENSSHAG00000003730	PUM3	82	59.252	ENSGMOG00000014217	pum3	98	59.203	Gadus_morhua
ENSSHAG00000003730	PUM3	99	66.974	ENSGALG00000010178	PUM3	99	70.812	Gallus_gallus
ENSSHAG00000003730	PUM3	58	57.256	ENSGAFG00000001930	pum3	65	57.256	Gambusia_affinis
ENSSHAG00000003730	PUM3	82	59.811	ENSGACG00000017878	pum3	97	59.848	Gasterosteus_aculeatus
ENSSHAG00000003730	PUM3	100	70.988	ENSGAGG00000018983	PUM3	99	70.988	Gopherus_agassizii
ENSSHAG00000003730	PUM3	99	78.671	ENSGGOG00000006143	PUM3	99	78.671	Gorilla_gorilla
ENSSHAG00000003730	PUM3	99	49.231	ENSHBUG00000012903	pum3	99	48.769	Haplochromis_burtoni
ENSSHAG00000003730	PUM3	100	78.374	ENSHGLG00000015868	-	99	80.336	Heterocephalus_glaber_female
ENSSHAG00000003730	PUM3	100	78.374	ENSHGLG00100018825	PUM3	100	80.336	Heterocephalus_glaber_male
ENSSHAG00000003730	PUM3	83	60.185	ENSHCOG00000010306	pum3	99	51.172	Hippocampus_comes
ENSSHAG00000003730	PUM3	87	63.380	ENSIPUG00000024801	pum3	97	58.333	Ictalurus_punctatus
ENSSHAG00000003730	PUM3	99	78.825	ENSSTOG00000009586	PUM3	99	80.438	Ictidomys_tridecemlineatus
ENSSHAG00000003730	PUM3	99	77.125	ENSJJAG00000012563	Pum3	99	77.125	Jaculus_jaculus
ENSSHAG00000003730	PUM3	99	53.383	ENSKMAG00000010277	pum3	99	55.859	Kryptolebias_marmoratus
ENSSHAG00000003730	PUM3	99	53.443	ENSLBEG00000012213	pum3	99	53.812	Labrus_bergylta
ENSSHAG00000003730	PUM3	99	65.123	ENSLACG00000008312	PUM3	99	68.924	Latimeria_chalumnae
ENSSHAG00000003730	PUM3	99	64.297	ENSLOCG00000012529	pum3	99	64.297	Lepisosteus_oculatus
ENSSHAG00000003730	PUM3	100	77.504	ENSLAFG00000017341	PUM3	99	77.504	Loxodonta_africana
ENSSHAG00000003730	PUM3	99	78.980	ENSMFAG00000001430	PUM3	99	78.980	Macaca_fascicularis
ENSSHAG00000003730	PUM3	99	78.980	ENSMMUG00000002362	PUM3	98	78.980	Macaca_mulatta
ENSSHAG00000003730	PUM3	99	78.980	ENSMNEG00000035288	PUM3	99	78.980	Macaca_nemestrina
ENSSHAG00000003730	PUM3	99	79.134	ENSMLEG00000034820	PUM3	99	79.134	Mandrillus_leucophaeus
ENSSHAG00000003730	PUM3	86	59.537	ENSMAMG00000022861	pum3	99	54.394	Mastacembelus_armatus
ENSSHAG00000003730	PUM3	99	54.009	ENSMZEG00005014205	pum3	97	54.186	Maylandia_zebra
ENSSHAG00000003730	PUM3	99	61.009	ENSMGAG00000002255	PUM3	99	62.392	Meleagris_gallopavo
ENSSHAG00000003730	PUM3	100	77.350	ENSMAUG00000009733	Pum3	99	77.350	Mesocricetus_auratus
ENSSHAG00000003730	PUM3	99	78.980	ENSMICG00000045916	PUM3	87	78.980	Microcebus_murinus
ENSSHAG00000003730	PUM3	100	74.422	ENSMOCG00000014830	-	100	74.422	Microtus_ochrogaster
ENSSHAG00000003730	PUM3	100	78.120	ENSMOCG00000019519	-	99	78.120	Microtus_ochrogaster
ENSSHAG00000003730	PUM3	98	50.929	ENSMMOG00000012184	pum3	99	51.250	Mola_mola
ENSSHAG00000003730	PUM3	100	87.895	ENSMODG00000015417	PUM3	100	87.895	Monodelphis_domestica
ENSSHAG00000003730	PUM3	82	58.912	ENSMALG00000022164	pum3	92	53.120	Monopterus_albus
ENSSHAG00000003730	PUM3	100	76.425	MGP_CAROLIEiJ_G0022845	Pum3	99	76.694	Mus_caroli
ENSSHAG00000003730	PUM3	100	76.733	ENSMUSG00000041360	Pum3	99	77.025	Mus_musculus
ENSSHAG00000003730	PUM3	99	77.743	MGP_PahariEiJ_G0014338	Pum3	99	77.743	Mus_pahari
ENSSHAG00000003730	PUM3	100	76.733	MGP_SPRETEiJ_G0023763	Pum3	99	77.025	Mus_spretus
ENSSHAG00000003730	PUM3	100	77.350	ENSMPUG00000005125	PUM3	100	77.350	Mustela_putorius_furo
ENSSHAG00000003730	PUM3	99	77.898	ENSMLUG00000002309	PUM3	99	78.146	Myotis_lucifugus
ENSSHAG00000003730	PUM3	100	73.190	ENSNGAG00000019468	Pum3	100	73.425	Nannospalax_galili
ENSSHAG00000003730	PUM3	94	53.150	ENSNBRG00000021370	pum3	79	59.960	Neolamprologus_brichardi
ENSSHAG00000003730	PUM3	99	79.134	ENSNLEG00000008712	PUM3	99	80.607	Nomascus_leucogenys
ENSSHAG00000003730	PUM3	77	70.659	ENSMEUG00000013606	-	99	70.659	Notamacropus_eugenii
ENSSHAG00000003730	PUM3	73	68.577	ENSOPRG00000004225	-	72	70.913	Ochotona_princeps
ENSSHAG00000003730	PUM3	100	76.994	ENSODEG00000003625	-	99	79.496	Octodon_degus
ENSSHAG00000003730	PUM3	100	72.086	ENSODEG00000016477	-	100	73.702	Octodon_degus
ENSSHAG00000003730	PUM3	99	54.799	ENSONIG00000012733	pum3	96	53.905	Oreochromis_niloticus
ENSSHAG00000003730	PUM3	81	78.261	ENSOANG00000014995	PUM3	97	78.195	Ornithorhynchus_anatinus
ENSSHAG00000003730	PUM3	99	76.271	ENSOCUG00000026104	-	100	76.271	Oryctolagus_cuniculus
ENSSHAG00000003730	PUM3	100	77.147	ENSOCUG00000004189	-	100	77.147	Oryctolagus_cuniculus
ENSSHAG00000003730	PUM3	90	55.818	ENSORLG00000014935	pum3	99	53.201	Oryzias_latipes
ENSSHAG00000003730	PUM3	99	51.885	ENSORLG00020002841	pum3	97	52.550	Oryzias_latipes_hni
ENSSHAG00000003730	PUM3	99	53.425	ENSORLG00015015906	pum3	99	53.517	Oryzias_latipes_hsok
ENSSHAG00000003730	PUM3	89	55.912	ENSOMEG00000009427	pum3	97	52.550	Oryzias_melastigma
ENSSHAG00000003730	PUM3	100	78.769	ENSOGAG00000008125	-	100	80.504	Otolemur_garnettii
ENSSHAG00000003730	PUM3	99	58.869	ENSOGAG00000033481	-	99	58.716	Otolemur_garnettii
ENSSHAG00000003730	PUM3	100	77.880	ENSOARG00000013337	PUM3	100	77.880	Ovis_aries
ENSSHAG00000003730	PUM3	99	78.549	ENSPPAG00000041337	PUM3	99	80.270	Pan_paniscus
ENSSHAG00000003730	PUM3	100	76.117	ENSPPRG00000000809	PUM3	100	77.311	Panthera_pardus
ENSSHAG00000003730	PUM3	100	76.579	ENSPTIG00000021934	PUM3	100	77.815	Panthera_tigris_altaica
ENSSHAG00000003730	PUM3	99	78.704	ENSPTRG00000020735	PUM3	99	80.438	Pan_troglodytes
ENSSHAG00000003730	PUM3	99	79.444	ENSPANG00000025118	PUM3	99	79.444	Papio_anubis
ENSSHAG00000003730	PUM3	99	61.350	ENSPKIG00000022249	pum3	98	60.258	Paramormyrops_kingsleyae
ENSSHAG00000003730	PUM3	100	70.370	ENSPSIG00000016272	PUM3	100	70.370	Pelodiscus_sinensis
ENSSHAG00000003730	PUM3	75	62.041	ENSPMGG00000021261	pum3	98	62.041	Periophthalmus_magnuspinnatus
ENSSHAG00000003730	PUM3	89	78.302	ENSPEMG00000019340	-	100	78.302	Peromyscus_maniculatus_bairdii
ENSSHAG00000003730	PUM3	100	89.637	ENSPCIG00000030598	PUM3	100	89.233	Phascolarctos_cinereus
ENSSHAG00000003730	PUM3	88	54.861	ENSPFOG00000001719	pum3	87	58.238	Poecilia_formosa
ENSSHAG00000003730	PUM3	81	58.238	ENSPLAG00000020010	pum3	96	52.019	Poecilia_latipinna
ENSSHAG00000003730	PUM3	81	58.046	ENSPMEG00000017451	pum3	96	51.863	Poecilia_mexicana
ENSSHAG00000003730	PUM3	99	79.134	ENSPPYG00000019255	PUM3	99	79.134	Pongo_abelii
ENSSHAG00000003730	PUM3	100	67.334	ENSPCAG00000005797	PUM3	95	67.899	Procavia_capensis
ENSSHAG00000003730	PUM3	100	78.428	ENSPCOG00000027325	PUM3	100	80.168	Propithecus_coquereli
ENSSHAG00000003730	PUM3	100	75.963	ENSPVAG00000016135	PUM3	95	75.963	Pteropus_vampyrus
ENSSHAG00000003730	PUM3	99	55.573	ENSPNYG00000016124	pum3	99	54.475	Pundamilia_nyererei
ENSSHAG00000003730	PUM3	99	59.568	ENSPNAG00000026524	pum3	97	58.140	Pygocentrus_nattereri
ENSSHAG00000003730	PUM3	100	76.425	ENSRNOG00000012574	Pum3	100	76.425	Rattus_norvegicus
ENSSHAG00000003730	PUM3	100	76.425	ENSRNOG00000048356	RGD1308750	100	76.425	Rattus_norvegicus
ENSSHAG00000003730	PUM3	99	79.134	ENSRBIG00000036924	PUM3	99	79.134	Rhinopithecus_bieti
ENSSHAG00000003730	PUM3	99	79.134	ENSRROG00000041089	PUM3	99	79.134	Rhinopithecus_roxellana
ENSSHAG00000003730	PUM3	99	79.134	ENSSBOG00000028066	PUM3	99	79.134	Saimiri_boliviensis_boliviensis
ENSSHAG00000003730	PUM3	98	61.406	ENSSFOG00015018778	pum3	97	61.406	Scleropages_formosus
ENSSHAG00000003730	PUM3	82	60.943	ENSSMAG00000013236	pum3	96	55.728	Scophthalmus_maximus
ENSSHAG00000003730	PUM3	99	53.824	ENSSDUG00000001887	pum3	99	51.176	Seriola_dumerili
ENSSHAG00000003730	PUM3	99	54.167	ENSSLDG00000015766	pum3	99	53.441	Seriola_lalandi_dorsalis
ENSSHAG00000003730	PUM3	96	75.201	ENSSARG00000000579	PUM3	100	75.201	Sorex_araneus
ENSSHAG00000003730	PUM3	97	68.690	ENSSPUG00000001707	PUM3	99	69.244	Sphenodon_punctatus
ENSSHAG00000003730	PUM3	99	53.383	ENSSPAG00000003976	pum3	97	54.714	Stegastes_partitus
ENSSHAG00000003730	PUM3	100	79.045	ENSSSCG00000005227	PUM3	99	79.045	Sus_scrofa
ENSSHAG00000003730	PUM3	100	68.673	ENSTGUG00000005339	PUM3	100	71.084	Taeniopygia_guttata
ENSSHAG00000003730	PUM3	99	55.639	ENSTRUG00000004074	pum3	99	54.751	Takifugu_rubripes
ENSSHAG00000003730	PUM3	86	59.715	ENSTNIG00000010325	pum3	85	61.553	Tetraodon_nigroviridis
ENSSHAG00000003730	PUM3	86	62.298	ENSTBEG00000013058	PUM3	86	62.298	Tupaia_belangeri
ENSSHAG00000003730	PUM3	100	70.878	ENSTTRG00000001062	PUM3	96	71.597	Tursiops_truncatus
ENSSHAG00000003730	PUM3	100	70.724	ENSUMAG00000018443	PUM3	99	75.283	Ursus_maritimus
ENSSHAG00000003730	PUM3	100	79.231	ENSVPAG00000010766	PUM3	99	80.504	Vicugna_pacos
ENSSHAG00000003730	PUM3	100	79.045	ENSVVUG00000006527	PUM3	99	79.045	Vulpes_vulpes
ENSSHAG00000003730	PUM3	100	54.573	ENSXETG00000011707	pum3	99	55.399	Xenopus_tropicalis
ENSSHAG00000003730	PUM3	85	54.414	ENSXCOG00000006725	pum3	99	50.397	Xiphophorus_couchianus
ENSSHAG00000003730	PUM3	95	53.195	ENSXMAG00000002926	pum3	97	51.692	Xiphophorus_maculatus