EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000003850 (Gene tree)
Gene ID: -
Gene Symbol: ZIC2
Alias: HPE5
Full Name: Zic family member 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 3837 bases
Position: chrGL849852.1:77393-81229
Accession: 12873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000004376	zf-C2H2	PF00096.26	3.2e-22	1	3
ENSSHAP00000004376	zf-C2H2	PF00096.26	3.2e-22	2	3
ENSSHAP00000004376	zf-C2H2	PF00096.26	3.2e-22	3	3
ENSSHAP00000004376	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004420	ZIC2-201	961	-	ENSSHAP00000004376	301 (aa)	-	G3VMH1

Gene Model

Click here to download ENSSHAG00000003850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000003850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000003850	ZIC2	51	41.667	ENSSHAG00000018106	-	67	41.667
ENSSHAG00000003850	ZIC2	52	37.736	ENSSHAG00000011906	-	51	37.736
ENSSHAG00000003850	ZIC2	51	44.444	ENSSHAG00000003090	-	82	44.444
ENSSHAG00000003850	ZIC2	54	30.714	ENSSHAG00000011486	-	72	32.215
ENSSHAG00000003850	ZIC2	54	42.593	ENSSHAG00000014216	-	73	42.593
ENSSHAG00000003850	ZIC2	59	34.579	ENSSHAG00000016096	-	93	34.579
ENSSHAG00000003850	ZIC2	54	37.984	ENSSHAG00000003284	-	68	38.298
ENSSHAG00000003850	ZIC2	58	43.182	ENSSHAG00000001415	-	72	43.182
ENSSHAG00000003850	ZIC2	50	36.697	ENSSHAG00000003250	PRDM5	76	36.697

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000003850	ZIC2	70	69.626	ENSAMXG00000037612	zic2b	53	68.807	Astyanax_mexicanus
ENSSHAG00000003850	ZIC2	84	95.038	ENSMLEG00000039873	ZIC2	92	90.909	Mandrillus_leucophaeus
ENSSHAG00000003850	ZIC2	97	85.570	ENSPKIG00000014203	ZIC2	64	84.354	Paramormyrops_kingsleyae
ENSSHAG00000003850	ZIC2	63	72.821	ENSPNAG00000011062	zic2b	55	67.890	Pygocentrus_nattereri