EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000004040 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2170 bases
Position: chrGL834935.1:85590-87759
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000004596	MA3	PF02847.17	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004644	-	2154	-	ENSSHAP00000004596	718 (aa)	-	G3VN41

Gene Model

Click here to download ENSSHAG00000004040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000004040	-	86	76.656	ENSSHAG00000016596	-	72	76.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004040	-	90	73.565	ENSG00000163510	CWC22	89	73.645	Homo_sapiens
ENSSHAG00000004040	-	77	69.107	ENSAPOG00000004200	cwc22	72	64.623	Acanthochromis_polyacanthus
ENSSHAG00000004040	-	90	72.810	ENSAMEG00000011004	CWC22	73	73.042	Ailuropoda_melanoleuca
ENSSHAG00000004040	-	77	72.401	ENSACIG00000020055	cwc22	74	66.149	Amphilophus_citrinellus
ENSSHAG00000004040	-	79	70.783	ENSAPEG00000002673	cwc22	62	66.508	Amphiprion_percula
ENSSHAG00000004040	-	79	70.312	ENSATEG00000005176	cwc22	69	66.915	Anabas_testudineus
ENSSHAG00000004040	-	90	69.173	ENSACAG00000009438	CWC22	74	69.715	Anolis_carolinensis
ENSSHAG00000004040	-	91	73.083	ENSANAG00000028324	CWC22	73	73.454	Aotus_nancymaae
ENSSHAG00000004040	-	78	69.965	ENSACLG00000025447	cwc22	92	66.250	Astatotilapia_calliptera
ENSSHAG00000004040	-	60	78.829	ENSAMXG00000014957	cwc22	66	73.359	Astyanax_mexicanus
ENSSHAG00000004040	-	90	72.879	ENSBTAG00000021726	CWC22	73	73.042	Bos_taurus
ENSSHAG00000004040	-	74	50.749	WBGene00002957	let-858	61	50.270	Caenorhabditis_elegans
ENSSHAG00000004040	-	90	73.112	ENSCAFG00000014160	CWC22	73	73.193	Canis_familiaris
ENSSHAG00000004040	-	87	74.295	ENSCAFG00020007223	CWC22	93	69.575	Canis_lupus_dingo
ENSSHAG00000004040	-	90	72.440	ENSCHIG00000017150	CWC22	73	73.042	Capra_hircus
ENSSHAG00000004040	-	94	63.274	ENSTSYG00000026635	-	69	65.738	Carlito_syrichta
ENSSHAG00000004040	-	94	64.464	ENSTSYG00000028686	-	71	66.721	Carlito_syrichta
ENSSHAG00000004040	-	80	70.740	ENSTSYG00000035591	-	76	68.943	Carlito_syrichta
ENSSHAG00000004040	-	90	71.903	ENSTSYG00000000218	-	73	72.810	Carlito_syrichta
ENSSHAG00000004040	-	80	73.529	ENSCAPG00000002064	CWC22	69	73.019	Cavia_aperea
ENSSHAG00000004040	-	90	73.100	ENSCPOG00000007492	CWC22	74	73.333	Cavia_porcellus
ENSSHAG00000004040	-	91	68.278	ENSCCAG00000021239	CWC22	73	69.184	Cebus_capucinus
ENSSHAG00000004040	-	91	72.973	ENSCATG00000035788	CWC22	73	73.494	Cercocebus_atys
ENSSHAG00000004040	-	90	72.851	ENSCLAG00000011118	CWC22	73	73.152	Chinchilla_lanigera
ENSSHAG00000004040	-	91	72.973	ENSCSAG00000012925	CWC22	73	73.494	Chlorocebus_sabaeus
ENSSHAG00000004040	-	90	65.559	ENSCHOG00000006362	CWC22	73	65.512	Choloepus_hoffmanni
ENSSHAG00000004040	-	90	69.565	ENSCPBG00000001765	CWC22	74	69.910	Chrysemys_picta_bellii
ENSSHAG00000004040	-	75	62.088	ENSCING00000008865	-	71	62.138	Ciona_intestinalis
ENSSHAG00000004040	-	75	59.594	ENSCSAVG00000003537	-	79	65.217	Ciona_savignyi
ENSSHAG00000004040	-	90	73.193	ENSCANG00000013762	CWC22	73	73.494	Colobus_angolensis_palliatus
ENSSHAG00000004040	-	90	71.818	ENSCGRG00001017005	-	91	72.424	Cricetulus_griseus_chok1gshd
ENSSHAG00000004040	-	90	71.818	ENSCGRG00000001934	-	73	72.424	Cricetulus_griseus_crigri
ENSSHAG00000004040	-	78	63.929	ENSCSEG00000005257	cwc22	69	61.022	Cynoglossus_semilaevis
ENSSHAG00000004040	-	78	72.212	ENSCVAG00000009836	cwc22	65	65.649	Cyprinodon_variegatus
ENSSHAG00000004040	-	78	71.781	ENSDARG00000014008	cwc22	67	65.408	Danio_rerio
ENSSHAG00000004040	-	90	72.205	ENSDNOG00000003020	-	73	72.205	Dasypus_novemcinctus
ENSSHAG00000004040	-	91	56.687	ENSDNOG00000032640	-	90	57.100	Dasypus_novemcinctus
ENSSHAG00000004040	-	88	72.866	ENSDORG00000011483	-	72	73.018	Dipodomys_ordii
ENSSHAG00000004040	-	90	62.462	ENSETEG00000013355	CWC22	93	63.554	Echinops_telfairi
ENSSHAG00000004040	-	55	50.856	ENSEBUG00000005724	cwc22	55	50.367	Eptatretus_burgeri
ENSSHAG00000004040	-	90	73.193	ENSEASG00005022287	CWC22	73	73.193	Equus_asinus_asinus
ENSSHAG00000004040	-	90	73.414	ENSECAG00000010769	CWC22	73	73.494	Equus_caballus
ENSSHAG00000004040	-	81	77.143	ENSEEUG00000005336	CWC22	65	77.857	Erinaceus_europaeus
ENSSHAG00000004040	-	78	71.908	ENSELUG00000010536	cwc22	91	68.366	Esox_lucius
ENSSHAG00000004040	-	90	73.645	ENSFCAG00000018982	CWC22	73	73.795	Felis_catus
ENSSHAG00000004040	-	90	67.699	ENSFALG00000003495	CWC22	74	67.699	Ficedula_albicollis
ENSSHAG00000004040	-	90	73.222	ENSFDAG00000010857	CWC22	73	73.676	Fukomys_damarensis
ENSSHAG00000004040	-	75	73.247	ENSFHEG00000009620	cwc22	65	66.927	Fundulus_heteroclitus
ENSSHAG00000004040	-	80	69.191	ENSGMOG00000009084	cwc22	93	69.191	Gadus_morhua
ENSSHAG00000004040	-	90	68.358	ENSGALG00000009001	CWC22	72	68.318	Gallus_gallus
ENSSHAG00000004040	-	76	72.761	ENSGAFG00000021155	cwc22	75	67.783	Gambusia_affinis
ENSSHAG00000004040	-	79	70.732	ENSGACG00000002071	cwc22	70	70.732	Gasterosteus_aculeatus
ENSSHAG00000004040	-	90	69.277	ENSGAGG00000013471	CWC22	73	69.865	Gopherus_agassizii
ENSSHAG00000004040	-	91	73.343	ENSGGOG00000012484	CWC22	73	73.645	Gorilla_gorilla
ENSSHAG00000004040	-	77	69.052	ENSHBUG00000010504	cwc22	72	65.024	Haplochromis_burtoni
ENSSHAG00000004040	-	90	73.263	ENSHGLG00000005692	CWC22	74	73.065	Heterocephalus_glaber_female
ENSSHAG00000004040	-	90	73.263	ENSHGLG00100016497	CWC22	95	72.012	Heterocephalus_glaber_male
ENSSHAG00000004040	-	76	70.803	ENSHCOG00000004206	cwc22	72	66.340	Hippocampus_comes
ENSSHAG00000004040	-	77	74.373	ENSIPUG00000005831	cwc22	67	69.677	Ictalurus_punctatus
ENSSHAG00000004040	-	91	72.549	ENSSTOG00000009788	CWC22	73	73.303	Ictidomys_tridecemlineatus
ENSSHAG00000004040	-	91	72.090	ENSJJAG00000017012	-	73	73.343	Jaculus_jaculus
ENSSHAG00000004040	-	79	70.761	ENSKMAG00000005228	cwc22	65	65.997	Kryptolebias_marmoratus
ENSSHAG00000004040	-	78	71.607	ENSLBEG00000020518	cwc22	71	65.116	Labrus_bergylta
ENSSHAG00000004040	-	87	65.032	ENSLACG00000005916	CWC22	56	64.715	Latimeria_chalumnae
ENSSHAG00000004040	-	75	75.830	ENSLOCG00000006456	cwc22	70	65.522	Lepisosteus_oculatus
ENSSHAG00000004040	-	90	72.414	ENSLAFG00000014802	CWC22	72	72.932	Loxodonta_africana
ENSSHAG00000004040	-	90	72.892	ENSMFAG00000000590	CWC22	78	73.494	Macaca_fascicularis
ENSSHAG00000004040	-	79	78.223	ENSMMUG00000020642	CWC22	72	72.561	Macaca_mulatta
ENSSHAG00000004040	-	90	72.892	ENSMNEG00000034567	CWC22	73	73.494	Macaca_nemestrina
ENSSHAG00000004040	-	91	72.973	ENSMLEG00000042344	CWC22	73	73.494	Mandrillus_leucophaeus
ENSSHAG00000004040	-	83	68.739	ENSMAMG00000018888	cwc22	60	67.537	Mastacembelus_armatus
ENSSHAG00000004040	-	78	69.965	ENSMZEG00005021449	cwc22	69	62.089	Maylandia_zebra
ENSSHAG00000004040	-	82	73.390	ENSMGAG00000009220	CWC22	66	73.435	Meleagris_gallopavo
ENSSHAG00000004040	-	65	79.787	ENSMAUG00000016154	-	62	79.787	Mesocricetus_auratus
ENSSHAG00000004040	-	89	73.394	ENSMICG00000016919	CWC22	73	73.926	Microcebus_murinus
ENSSHAG00000004040	-	76	68.535	ENSMMOG00000019720	cwc22	87	63.929	Mola_mola
ENSSHAG00000004040	-	76	74.545	ENSMODG00000003711	-	100	74.545	Monodelphis_domestica
ENSSHAG00000004040	-	77	74.094	ENSMODG00000020117	-	100	74.094	Monodelphis_domestica
ENSSHAG00000004040	-	90	76.104	ENSMODG00000010233	-	73	76.408	Monodelphis_domestica
ENSSHAG00000004040	-	91	70.808	MGP_CAROLIEiJ_G0023696	-	90	71.795	Mus_caroli
ENSSHAG00000004040	-	95	69.099	ENSMUSG00000027014	Cwc22	97	70.270	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000096484	Gm13696	80	71.940	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000096337	Gm13694	80	71.940	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000094336	Gm13693	80	71.940	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000094125	Gm13698	80	71.940	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000095824	Gm13697	80	71.940	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000096729	Gm13695	80	71.791	Mus_musculus
ENSSHAG00000004040	-	91	70.815	ENSMUSG00000079247	Gm13691	80	71.940	Mus_musculus
ENSSHAG00000004040	-	91	70.404	MGP_PahariEiJ_G0025147	-	90	71.988	Mus_pahari
ENSSHAG00000004040	-	91	73.343	ENSMPUG00000002432	CWC22	73	73.795	Mustela_putorius_furo
ENSSHAG00000004040	-	91	71.791	ENSMLUG00000024966	-	84	72.114	Myotis_lucifugus
ENSSHAG00000004040	-	78	79.041	ENSMLUG00000013437	-	71	77.311	Myotis_lucifugus
ENSSHAG00000004040	-	86	69.497	ENSNGAG00000013881	-	90	72.241	Nannospalax_galili
ENSSHAG00000004040	-	50	64.266	ENSNBRG00000019380	cwc22	88	63.467	Neolamprologus_brichardi
ENSSHAG00000004040	-	90	73.112	ENSNLEG00000006248	CWC22	73	73.946	Nomascus_leucogenys
ENSSHAG00000004040	-	78	74.153	ENSMEUG00000011026	CWC22	100	74.510	Notamacropus_eugenii
ENSSHAG00000004040	-	65	80.000	ENSOPRG00000007844	CWC22	58	79.787	Ochotona_princeps
ENSSHAG00000004040	-	70	79.020	ENSODEG00000007673	CWC22	82	79.020	Octodon_degus
ENSSHAG00000004040	-	65	74.893	ENSODEG00000005934	-	72	74.893	Octodon_degus
ENSSHAG00000004040	-	90	71.084	ENSOANG00000008649	CWC22	68	80.230	Ornithorhynchus_anatinus
ENSSHAG00000004040	-	82	69.449	ENSORLG00000010538	cwc22	66	68.088	Oryzias_latipes
ENSSHAG00000004040	-	82	69.449	ENSORLG00020015117	cwc22	66	68.088	Oryzias_latipes_hni
ENSSHAG00000004040	-	82	69.500	ENSORLG00015018073	cwc22	66	68.088	Oryzias_latipes_hsok
ENSSHAG00000004040	-	77	71.864	ENSOMEG00000015199	cwc22	59	72.222	Oryzias_melastigma
ENSSHAG00000004040	-	88	72.811	ENSOGAG00000015287	CWC22	71	73.425	Otolemur_garnettii
ENSSHAG00000004040	-	90	72.030	ENSOARG00000016905	CWC22	73	72.782	Ovis_aries
ENSSHAG00000004040	-	91	72.590	ENSPPAG00000027833	CWC22	73	73.364	Pan_paniscus
ENSSHAG00000004040	-	90	73.193	ENSPPRG00000001389	CWC22	73	73.795	Panthera_pardus
ENSSHAG00000004040	-	90	73.193	ENSPTIG00000019139	CWC22	73	73.795	Panthera_tigris_altaica
ENSSHAG00000004040	-	90	73.565	ENSPTRG00000012698	CWC22	73	73.645	Pan_troglodytes
ENSSHAG00000004040	-	91	72.973	ENSPANG00000018976	CWC22	73	73.494	Papio_anubis
ENSSHAG00000004040	-	77	72.252	ENSPKIG00000021346	cwc22	70	67.881	Paramormyrops_kingsleyae
ENSSHAG00000004040	-	90	70.517	ENSPSIG00000008632	CWC22	73	70.365	Pelodiscus_sinensis
ENSSHAG00000004040	-	78	66.607	ENSPMGG00000020129	cwc22	65	62.360	Periophthalmus_magnuspinnatus
ENSSHAG00000004040	-	83	72.231	ENSPEMG00000023936	-	85	72.667	Peromyscus_maniculatus_bairdii
ENSSHAG00000004040	-	85	64.812	ENSPMAG00000005914	cwc22	70	66.945	Petromyzon_marinus
ENSSHAG00000004040	-	90	77.321	ENSPCIG00000009903	-	91	77.626	Phascolarctos_cinereus
ENSSHAG00000004040	-	77	72.973	ENSPFOG00000015025	cwc22	85	66.667	Poecilia_formosa
ENSSHAG00000004040	-	76	73.321	ENSPLAG00000021405	cwc22	66	64.910	Poecilia_latipinna
ENSSHAG00000004040	-	77	72.973	ENSPMEG00000007850	cwc22	66	65.165	Poecilia_mexicana
ENSSHAG00000004040	-	77	68.829	ENSPREG00000004312	cwc22	73	64.818	Poecilia_reticulata
ENSSHAG00000004040	-	91	73.273	ENSPPYG00000012986	CWC22	73	73.795	Pongo_abelii
ENSSHAG00000004040	-	88	71.803	ENSPCAG00000011882	CWC22	72	71.803	Procavia_capensis
ENSSHAG00000004040	-	81	78.272	ENSPCOG00000010195	CWC22	71	57.658	Propithecus_coquereli
ENSSHAG00000004040	-	90	72.163	ENSPVAG00000011497	CWC22	73	72.851	Pteropus_vampyrus
ENSSHAG00000004040	-	78	67.491	ENSPNYG00000010435	cwc22	93	63.863	Pundamilia_nyererei
ENSSHAG00000004040	-	88	68.210	ENSRNOG00000012651	Cwc22	72	69.290	Rattus_norvegicus
ENSSHAG00000004040	-	88	67.846	ENSRNOG00000038322	LOC500684	72	68.923	Rattus_norvegicus
ENSSHAG00000004040	-	90	69.196	ENSRBIG00000036751	CWC22	73	70.152	Rhinopithecus_bieti
ENSSHAG00000004040	-	91	72.973	ENSRROG00000037520	CWC22	73	73.494	Rhinopithecus_roxellana
ENSSHAG00000004040	-	90	70.633	ENSSBOG00000021683	CWC22	72	70.997	Saimiri_boliviensis_boliviensis
ENSSHAG00000004040	-	70	71.992	ENSSFOG00015010559	cwc22	62	73.047	Scleropages_formosus
ENSSHAG00000004040	-	83	66.833	ENSSMAG00000004724	cwc22	61	65.705	Scophthalmus_maximus
ENSSHAG00000004040	-	81	69.283	ENSSDUG00000010656	cwc22	71	61.538	Seriola_dumerili
ENSSHAG00000004040	-	76	72.131	ENSSLDG00000023157	cwc22	90	66.773	Seriola_lalandi_dorsalis
ENSSHAG00000004040	-	62	83.523	ENSSARG00000013596	-	50	83.523	Sorex_araneus
ENSSHAG00000004040	-	84	70.443	ENSSPUG00000006395	CWC22	71	70.915	Sphenodon_punctatus
ENSSHAG00000004040	-	77	72.401	ENSSPAG00000008746	cwc22	61	67.252	Stegastes_partitus
ENSSHAG00000004040	-	90	73.182	ENSSSCG00000016008	CWC22	73	73.494	Sus_scrofa
ENSSHAG00000004040	-	87	70.588	ENSTGUG00000009340	-	75	69.372	Taeniopygia_guttata
ENSSHAG00000004040	-	83	67.554	ENSTRUG00000014411	cwc22	64	67.528	Takifugu_rubripes
ENSSHAG00000004040	-	76	69.627	ENSTNIG00000005074	cwc22	86	63.182	Tetraodon_nigroviridis
ENSSHAG00000004040	-	85	59.578	ENSTBEG00000014539	CWC22	67	59.740	Tupaia_belangeri
ENSSHAG00000004040	-	90	72.727	ENSTTRG00000012142	CWC22	73	72.590	Tursiops_truncatus
ENSSHAG00000004040	-	90	73.343	ENSUAMG00000010342	CWC22	70	81.863	Ursus_americanus
ENSSHAG00000004040	-	90	73.263	ENSUMAG00000016730	CWC22	73	73.494	Ursus_maritimus
ENSSHAG00000004040	-	90	73.112	ENSVPAG00000008565	CWC22	73	73.042	Vicugna_pacos
ENSSHAG00000004040	-	90	73.263	ENSVVUG00000009738	CWC22	73	73.042	Vulpes_vulpes
ENSSHAG00000004040	-	76	75.495	ENSXETG00000014099	cwc22	86	67.262	Xenopus_tropicalis
ENSSHAG00000004040	-	76	72.777	ENSXMAG00000013201	cwc22	66	64.857	Xiphophorus_maculatus