EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000004065 (Gene tree)
Gene ID: 100922532
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2641 bases
Position: chrGL841406.1:86699-89339
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000004627	Exo_endo_phos	PF03372.23	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004675	-	1596	-	ENSSHAP00000004627	511 (aa)	-	G3VN72

Gene Model

Click here to download ENSSHAG00000004065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000004065	-	95	43.077	ENSSHAG00000006412	SMPD3	74	41.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004065	-	96	42.643	ENSAPOG00000005846	smpd5	99	37.258	Acanthochromis_polyacanthus
ENSSHAG00000004065	-	98	60.600	ENSAMEG00000006154	-	98	60.600	Ailuropoda_melanoleuca
ENSSHAG00000004065	-	96	43.385	ENSACIG00000015732	smpd5	82	41.846	Amphilophus_citrinellus
ENSSHAG00000004065	-	96	38.840	ENSAOCG00000001729	smpd5	99	38.840	Amphiprion_ocellaris
ENSSHAG00000004065	-	96	44.379	ENSAPEG00000010110	smpd5	99	39.016	Amphiprion_percula
ENSSHAG00000004065	-	92	44.479	ENSATEG00000005476	smpd5	79	42.945	Anabas_testudineus
ENSSHAG00000004065	-	96	41.365	ENSACAG00000005338	-	99	41.365	Anolis_carolinensis
ENSSHAG00000004065	-	96	43.544	ENSACLG00000004150	smpd5	99	39.060	Astatotilapia_calliptera
ENSSHAG00000004065	-	96	46.784	ENSAMXG00000015890	smpd5	99	40.035	Astyanax_mexicanus
ENSSHAG00000004065	-	95	42.424	ENSAMXG00000009000	smpd3	79	42.424	Astyanax_mexicanus
ENSSHAG00000004065	-	96	55.993	ENSBTAG00000015040	-	99	55.801	Bos_taurus
ENSSHAG00000004065	-	96	58.537	ENSCAFG00020018801	-	99	58.200	Canis_lupus_dingo
ENSSHAG00000004065	-	95	45.219	ENSCPBG00000007123	-	96	42.270	Chrysemys_picta_bellii
ENSSHAG00000004065	-	99	57.843	ENSCGRG00001020226	Smpd5	98	57.843	Cricetulus_griseus_chok1gshd
ENSSHAG00000004065	-	99	57.843	ENSCGRG00000016807	Smpd5	98	57.843	Cricetulus_griseus_crigri
ENSSHAG00000004065	-	88	44.615	ENSCSEG00000004339	smpd5	70	44.615	Cynoglossus_semilaevis
ENSSHAG00000004065	-	96	37.173	ENSDARG00000059811	smpd5	99	36.300	Danio_rerio
ENSSHAG00000004065	-	98	59.524	ENSEASG00005009745	-	99	58.648	Equus_asinus_asinus
ENSSHAG00000004065	-	98	59.722	ENSECAG00000011998	-	99	58.847	Equus_caballus
ENSSHAG00000004065	-	96	45.092	ENSELUG00000002998	smpd5	83	45.092	Esox_lucius
ENSSHAG00000004065	-	96	43.333	ENSFCAG00000023364	SMPD3	75	43.333	Felis_catus
ENSSHAG00000004065	-	78	36.688	ENSGMOG00000006983	smpd5	99	36.897	Gadus_morhua
ENSSHAG00000004065	-	94	42.901	ENSGAFG00000005978	smpd5	82	41.667	Gambusia_affinis
ENSSHAG00000004065	-	95	44.422	ENSGAGG00000010557	-	98	41.879	Gopherus_agassizii
ENSSHAG00000004065	-	96	43.544	ENSHBUG00000017212	smpd5	99	39.060	Haplochromis_burtoni
ENSSHAG00000004065	-	96	41.796	ENSHCOG00000005211	smpd5	87	41.796	Hippocampus_comes
ENSSHAG00000004065	-	96	45.345	ENSIPUG00000007675	Smpd3	86	45.345	Ictalurus_punctatus
ENSSHAG00000004065	-	98	60.800	ENSSTOG00000026841	-	99	60.800	Ictidomys_tridecemlineatus
ENSSHAG00000004065	-	96	40.705	ENSKMAG00000014523	smpd5	98	39.882	Kryptolebias_marmoratus
ENSSHAG00000004065	-	96	43.558	ENSLBEG00000000634	smpd5	81	43.558	Labrus_bergylta
ENSSHAG00000004065	-	96	43.027	ENSMAMG00000012885	smpd5	83	42.121	Mastacembelus_armatus
ENSSHAG00000004065	-	96	43.544	ENSMZEG00005014373	smpd5	84	42.042	Maylandia_zebra
ENSSHAG00000004065	-	98	57.086	ENSMICG00000044882	-	99	57.086	Microcebus_murinus
ENSSHAG00000004065	-	98	59.761	ENSMOCG00000004813	Smpd5	97	59.082	Microtus_ochrogaster
ENSSHAG00000004065	-	99	77.778	ENSMODG00000024098	-	99	77.778	Monodelphis_domestica
ENSSHAG00000004065	-	95	42.462	ENSMODG00000005091	SMPD3	74	42.462	Monodelphis_domestica
ENSSHAG00000004065	-	79	61.538	ENSMPUG00000007287	-	99	60.279	Mustela_putorius_furo
ENSSHAG00000004065	-	96	43.243	ENSNBRG00000015871	smpd5	84	43.243	Neolamprologus_brichardi
ENSSHAG00000004065	-	61	44.037	ENSMEUG00000015228	-	73	44.037	Notamacropus_eugenii
ENSSHAG00000004065	-	96	43.544	ENSONIG00000003005	smpd5	84	43.544	Oreochromis_niloticus
ENSSHAG00000004065	-	97	60.474	ENSOANG00000015137	-	97	60.474	Ornithorhynchus_anatinus
ENSSHAG00000004065	-	96	42.042	ENSORLG00000007890	smpd5	85	40.541	Oryzias_latipes
ENSSHAG00000004065	-	96	42.042	ENSORLG00020014621	smpd5	85	40.541	Oryzias_latipes_hni
ENSSHAG00000004065	-	96	42.042	ENSORLG00015020862	smpd5	85	40.541	Oryzias_latipes_hsok
ENSSHAG00000004065	-	96	43.252	ENSOMEG00000021400	smpd5	83	43.252	Oryzias_melastigma
ENSSHAG00000004065	-	96	60.324	ENSOARG00000015429	-	91	59.921	Ovis_aries
ENSSHAG00000004065	-	98	60.120	ENSPPRG00000024542	-	98	60.241	Panthera_pardus
ENSSHAG00000004065	-	96	43.636	ENSPPRG00000012973	SMPD3	75	43.636	Panthera_pardus
ENSSHAG00000004065	-	96	42.553	ENSPTIG00000006728	SMPD3	85	42.553	Panthera_tigris_altaica
ENSSHAG00000004065	-	96	44.706	ENSPKIG00000019783	smpd5	90	44.706	Paramormyrops_kingsleyae
ENSSHAG00000004065	-	96	43.675	ENSPKIG00000015630	smpd3	58	43.675	Paramormyrops_kingsleyae
ENSSHAG00000004065	-	95	39.564	ENSPMGG00000011984	smpd5	98	35.519	Periophthalmus_magnuspinnatus
ENSSHAG00000004065	-	98	57.685	ENSPEMG00000015740	Smpd5	96	57.685	Peromyscus_maniculatus_bairdii
ENSSHAG00000004065	-	100	83.366	ENSPCIG00000009107	-	96	83.366	Phascolarctos_cinereus
ENSSHAG00000004065	-	94	42.508	ENSPFOG00000002379	smpd5	83	41.284	Poecilia_formosa
ENSSHAG00000004065	-	94	42.593	ENSPLAG00000015772	smpd5	83	41.358	Poecilia_latipinna
ENSSHAG00000004065	-	94	42.593	ENSPMEG00000001599	smpd5	83	41.358	Poecilia_mexicana
ENSSHAG00000004065	-	94	42.593	ENSPREG00000000831	smpd5	82	41.358	Poecilia_reticulata
ENSSHAG00000004065	-	96	39.060	ENSPNYG00000015647	smpd5	99	39.060	Pundamilia_nyererei
ENSSHAG00000004065	-	95	44.144	ENSPNAG00000001774	smpd3	71	44.144	Pygocentrus_nattereri
ENSSHAG00000004065	-	96	43.402	ENSPNAG00000018539	smpd5	99	36.678	Pygocentrus_nattereri
ENSSHAG00000004065	-	96	45.455	ENSSFOG00015000870	smpd5	85	45.482	Scleropages_formosus
ENSSHAG00000004065	-	96	43.865	ENSSMAG00000020132	smpd5	85	42.331	Scophthalmus_maximus
ENSSHAG00000004065	-	96	44.172	ENSSDUG00000005881	smpd5	82	44.172	Seriola_dumerili
ENSSHAG00000004065	-	96	44.172	ENSSLDG00000015320	smpd5	82	44.172	Seriola_lalandi_dorsalis
ENSSHAG00000004065	-	96	39.646	ENSSPAG00000007973	smpd5	99	39.823	Stegastes_partitus
ENSSHAG00000004065	-	61	61.342	ENSSSCG00000005922	-	98	61.342	Sus_scrofa
ENSSHAG00000004065	-	96	43.807	ENSTRUG00000014862	smpd5	89	43.807	Takifugu_rubripes
ENSSHAG00000004065	-	96	45.370	ENSTNIG00000018420	smpd5	84	45.370	Tetraodon_nigroviridis
ENSSHAG00000004065	-	96	41.748	ENSXETG00000031246	-	99	40.038	Xenopus_tropicalis
ENSSHAG00000004065	-	95	42.988	ENSXETG00000006675	smpd3	73	42.988	Xenopus_tropicalis
ENSSHAG00000004065	-	94	43.210	ENSXCOG00000019783	smpd5	84	41.975	Xiphophorus_couchianus
ENSSHAG00000004065	-	94	43.210	ENSXMAG00000013998	smpd5	84	41.975	Xiphophorus_maculatus