EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000004332 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 1198 bases
Position: chrGL850551.1:99887-101084
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000004945	zf-C2H2	PF00096.26	6.2e-19	1	4
ENSSHAP00000004945	zf-C2H2	PF00096.26	6.2e-19	2	4
ENSSHAP00000004945	zf-C2H2	PF00096.26	6.2e-19	3	4
ENSSHAP00000004945	zf-C2H2	PF00096.26	6.2e-19	4	4
ENSSHAP00000004945	zf-met	PF12874.7	6.5e-10	1	3
ENSSHAP00000004945	zf-met	PF12874.7	6.5e-10	2	3
ENSSHAP00000004945	zf-met	PF12874.7	6.5e-10	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000004994	-	372	-	ENSSHAP00000004945	123 (aa)	-	G3VP40

Gene Model

Click here to download ENSSHAG00000004332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000004332	-	94	35.366	ENSSHAG00000011486	-	90	35.366
ENSSHAG00000004332	-	93	36.066	ENSSHAG00000012248	-	55	36.538
ENSSHAG00000004332	-	93	36.364	ENSSHAG00000002844	-	61	36.364
ENSSHAG00000004332	-	92	41.667	ENSSHAG00000003284	-	77	42.056
ENSSHAG00000004332	-	96	43.902	ENSSHAG00000011714	-	58	43.902
ENSSHAG00000004332	-	89	42.683	ENSSHAG00000011906	-	61	42.683
ENSSHAG00000004332	-	89	38.554	ENSSHAG00000003090	-	80	38.554
ENSSHAG00000004332	-	88	43.119	ENSSHAG00000014216	-	75	43.119
ENSSHAG00000004332	-	89	40.952	ENSSHAG00000008255	ZNF768	62	40.952
ENSSHAG00000004332	-	84	41.176	ENSSHAG00000016096	-	66	41.176
ENSSHAG00000004332	-	96	40.000	ENSSHAG00000001415	-	77	40.367
ENSSHAG00000004332	-	90	40.909	ENSSHAG00000009882	ZBTB16	87	33.333
ENSSHAG00000004332	-	95	40.244	ENSSHAG00000018106	-	67	40.244
ENSSHAG00000004332	-	92	38.318	ENSSHAG00000011347	ZNF668	84	38.318
ENSSHAG00000004332	-	97	38.158	ENSSHAG00000011015	SNAI1	54	38.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004332	-	72	84.270	ENSFALG00000014471	-	97	84.270	Ficedula_albicollis
ENSSHAG00000004332	-	98	85.833	ENSOARG00000003909	-	90	89.381	Ovis_aries
ENSSHAG00000004332	-	69	85.882	ENSTGUG00000016690	-	88	85.882	Taeniopygia_guttata