EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000004503 (Gene tree)
Gene ID: 100930079
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 89795 bases
Position: chrGL849688.1:107738-197532
Accession: 100930079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005149	zf-C2H2	PF00096.26	7.4e-33	1	5
ENSSHAP00000005149	zf-C2H2	PF00096.26	7.4e-33	2	5
ENSSHAP00000005149	zf-C2H2	PF00096.26	7.4e-33	3	5
ENSSHAP00000005149	zf-C2H2	PF00096.26	7.4e-33	4	5
ENSSHAP00000005149	zf-C2H2	PF00096.26	7.4e-33	5	5
ENSSHAP00000005149	zf-met	PF12874.7	6e-06	1	2
ENSSHAP00000005149	zf-met	PF12874.7	6e-06	2	2
ENSSHAP00000005149	zf-C2H2_jaz	PF12171.8	9.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000005200	PRDM10-201	3598	-	ENSSHAP00000005149	1158 (aa)	XP_012400604	G3VPP4

Gene Model

Click here to download ENSSHAG00000004503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004503's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004503	PRDM10	99	87.360	ENSG00000170325	PRDM10	100	87.743	Homo_sapiens
ENSSHAG00000004503	PRDM10	99	84.539	ENSAMEG00000002425	PRDM10	99	83.943	Ailuropoda_melanoleuca
ENSSHAG00000004503	PRDM10	99	87.478	ENSAPLG00000004858	PRDM10	99	88.256	Anas_platyrhynchos
ENSSHAG00000004503	PRDM10	99	69.264	ENSANAG00000022064	PRDM10	99	72.797	Aotus_nancymaae
ENSSHAG00000004503	PRDM10	99	86.908	ENSBTAG00000019001	PRDM10	99	85.948	Bos_taurus
ENSSHAG00000004503	PRDM10	99	87.263	ENSCJAG00000009235	PRDM10	99	87.177	Callithrix_jacchus
ENSSHAG00000004503	PRDM10	99	86.047	ENSCAFG00000010164	PRDM10	99	85.431	Canis_familiaris
ENSSHAG00000004503	PRDM10	99	84.856	ENSCAFG00020010152	PRDM10	96	88.608	Canis_lupus_dingo
ENSSHAG00000004503	PRDM10	99	86.994	ENSCHIG00000026530	PRDM10	99	86.034	Capra_hircus
ENSSHAG00000004503	PRDM10	99	88.134	ENSTSYG00000000544	PRDM10	99	88.306	Carlito_syrichta
ENSSHAG00000004503	PRDM10	99	80.904	ENSCAPG00000017296	PRDM10	99	80.392	Cavia_aperea
ENSSHAG00000004503	PRDM10	93	81.182	ENSCPOG00000000389	PRDM10	97	80.493	Cavia_porcellus
ENSSHAG00000004503	PRDM10	99	87.177	ENSCCAG00000024567	PRDM10	99	87.091	Cebus_capucinus
ENSSHAG00000004503	PRDM10	99	88.200	ENSCATG00000040031	PRDM10	99	88.028	Cercocebus_atys
ENSSHAG00000004503	PRDM10	99	85.666	ENSCLAG00000014605	PRDM10	99	90.909	Chinchilla_lanigera
ENSSHAG00000004503	PRDM10	99	88.114	ENSCSAG00000002202	PRDM10	99	87.941	Chlorocebus_sabaeus
ENSSHAG00000004503	PRDM10	99	85.488	ENSCPBG00000026880	PRDM10	99	85.988	Chrysemys_picta_bellii
ENSSHAG00000004503	PRDM10	99	87.522	ENSCANG00000032669	PRDM10	99	87.435	Colobus_angolensis_palliatus
ENSSHAG00000004503	PRDM10	99	85.567	ENSCGRG00001021647	Prdm10	98	85.052	Cricetulus_griseus_chok1gshd
ENSSHAG00000004503	PRDM10	99	85.567	ENSCGRG00000006562	Prdm10	98	85.052	Cricetulus_griseus_crigri
ENSSHAG00000004503	PRDM10	82	90.401	ENSDNOG00000001366	PRDM10	95	90.295	Dasypus_novemcinctus
ENSSHAG00000004503	PRDM10	99	85.788	ENSDORG00000014292	Prdm10	99	86.423	Dipodomys_ordii
ENSSHAG00000004503	PRDM10	99	88.028	ENSEASG00005022914	PRDM10	98	89.610	Equus_asinus_asinus
ENSSHAG00000004503	PRDM10	99	88.114	ENSECAG00000011499	PRDM10	98	89.610	Equus_caballus
ENSSHAG00000004503	PRDM10	98	88.674	ENSFCAG00000004111	PRDM10	96	87.961	Felis_catus
ENSSHAG00000004503	PRDM10	99	83.236	ENSFALG00000004873	PRDM10	99	83.319	Ficedula_albicollis
ENSSHAG00000004503	PRDM10	99	84.609	ENSFDAG00000017311	PRDM10	97	88.608	Fukomys_damarensis
ENSSHAG00000004503	PRDM10	96	88.689	ENSGALG00000033660	PRDM10	99	88.330	Gallus_gallus
ENSSHAG00000004503	PRDM10	92	70.370	ENSGACG00000012293	prdm10	98	70.370	Gasterosteus_aculeatus
ENSSHAG00000004503	PRDM10	99	87.113	ENSGAGG00000012523	PRDM10	99	87.715	Gopherus_agassizii
ENSSHAG00000004503	PRDM10	99	87.543	ENSGGOG00000015359	PRDM10	99	87.371	Gorilla_gorilla
ENSSHAG00000004503	PRDM10	99	85.072	ENSHGLG00000001106	PRDM10	97	89.610	Heterocephalus_glaber_female
ENSSHAG00000004503	PRDM10	99	85.302	ENSHGLG00100002350	PRDM10	97	89.610	Heterocephalus_glaber_male
ENSSHAG00000004503	PRDM10	99	87.435	ENSSTOG00000002015	PRDM10	99	87.435	Ictidomys_tridecemlineatus
ENSSHAG00000004503	PRDM10	81	87.435	ENSJJAG00000021493	Prdm10	90	86.858	Jaculus_jaculus
ENSSHAG00000004503	PRDM10	99	85.299	ENSLAFG00000031867	PRDM10	99	85.043	Loxodonta_africana
ENSSHAG00000004503	PRDM10	99	88.114	ENSMFAG00000031008	PRDM10	99	87.941	Macaca_fascicularis
ENSSHAG00000004503	PRDM10	99	88.114	ENSMMUG00000017555	PRDM10	99	87.941	Macaca_mulatta
ENSSHAG00000004503	PRDM10	99	88.200	ENSMNEG00000036493	PRDM10	99	88.028	Macaca_nemestrina
ENSSHAG00000004503	PRDM10	96	83.764	ENSMLEG00000042028	PRDM10	99	86.667	Mandrillus_leucophaeus
ENSSHAG00000004503	PRDM10	99	84.474	ENSMGAG00000001112	PRDM10	99	85.142	Meleagris_gallopavo
ENSSHAG00000004503	PRDM10	99	87.769	ENSMICG00000013888	PRDM10	99	87.769	Microcebus_murinus
ENSSHAG00000004503	PRDM10	99	83.768	ENSMOCG00000021853	Prdm10	99	83.684	Microtus_ochrogaster
ENSSHAG00000004503	PRDM10	76	97.619	ENSMODG00000004979	PRDM10	100	97.619	Monodelphis_domestica
ENSSHAG00000004503	PRDM10	99	84.093	ENSMUSG00000042496	Prdm10	99	84.020	Mus_musculus
ENSSHAG00000004503	PRDM10	99	85.518	MGP_SPRETEiJ_G0033061	-	99	85.090	Mus_spretus
ENSSHAG00000004503	PRDM10	99	88.028	ENSMPUG00000008711	PRDM10	99	87.414	Mustela_putorius_furo
ENSSHAG00000004503	PRDM10	99	86.094	ENSMLUG00000013051	PRDM10	99	85.395	Myotis_lucifugus
ENSSHAG00000004503	PRDM10	99	86.736	ENSNGAG00000000580	Prdm10	99	87.910	Nannospalax_galili
ENSSHAG00000004503	PRDM10	99	88.114	ENSNLEG00000007488	PRDM10	99	87.941	Nomascus_leucogenys
ENSSHAG00000004503	PRDM10	99	84.473	ENSODEG00000005309	PRDM10	99	90.909	Octodon_degus
ENSSHAG00000004503	PRDM10	99	84.003	ENSOANG00000000577	-	99	82.977	Ornithorhynchus_anatinus
ENSSHAG00000004503	PRDM10	99	86.638	ENSOCUG00000003736	PRDM10	99	86.391	Oryctolagus_cuniculus
ENSSHAG00000004503	PRDM10	99	86.438	ENSOGAG00000010723	PRDM10	99	86.352	Otolemur_garnettii
ENSSHAG00000004503	PRDM10	99	87.080	ENSOARG00000014507	PRDM10	99	86.121	Ovis_aries
ENSSHAG00000004503	PRDM10	99	87.543	ENSPPAG00000042881	PRDM10	99	87.371	Pan_paniscus
ENSSHAG00000004503	PRDM10	99	88.114	ENSPPRG00000007002	PRDM10	99	87.414	Panthera_pardus
ENSSHAG00000004503	PRDM10	99	88.200	ENSPTIG00000013331	PRDM10	99	87.500	Panthera_tigris_altaica
ENSSHAG00000004503	PRDM10	99	87.371	ENSPTRG00000004477	PRDM10	99	87.199	Pan_troglodytes
ENSSHAG00000004503	PRDM10	99	88.114	ENSPANG00000017470	PRDM10	99	87.941	Papio_anubis
ENSSHAG00000004503	PRDM10	99	84.856	ENSPEMG00000014985	Prdm10	99	85.025	Peromyscus_maniculatus_bairdii
ENSSHAG00000004503	PRDM10	99	87.532	ENSPPYG00000004061	PRDM10	99	87.360	Pongo_abelii
ENSSHAG00000004503	PRDM10	92	79.721	ENSPCAG00000014514	PRDM10	99	80.000	Procavia_capensis
ENSSHAG00000004503	PRDM10	99	73.265	ENSPCOG00000023406	PRDM10	99	73.883	Propithecus_coquereli
ENSSHAG00000004503	PRDM10	99	87.468	ENSPVAG00000012764	PRDM10	99	86.770	Pteropus_vampyrus
ENSSHAG00000004503	PRDM10	99	86.071	ENSRNOG00000007853	Prdm10	99	85.641	Rattus_norvegicus
ENSSHAG00000004503	PRDM10	99	87.962	ENSRBIG00000030924	PRDM10	99	87.446	Rhinopithecus_bieti
ENSSHAG00000004503	PRDM10	99	87.962	ENSRROG00000034334	PRDM10	99	87.446	Rhinopithecus_roxellana
ENSSHAG00000004503	PRDM10	99	87.274	ENSSBOG00000008773	PRDM10	99	87.102	Saimiri_boliviensis_boliviensis
ENSSHAG00000004503	PRDM10	66	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSSHAG00000004503	PRDM10	99	83.591	ENSSPUG00000001178	PRDM10	97	88.472	Sphenodon_punctatus
ENSSHAG00000004503	PRDM10	99	87.296	ENSSSCG00000015243	PRDM10	100	89.655	Sus_scrofa
ENSSHAG00000004503	PRDM10	99	86.305	ENSTGUG00000000530	PRDM10	99	86.822	Taeniopygia_guttata
ENSSHAG00000004503	PRDM10	95	86.123	ENSTBEG00000007221	PRDM10	94	86.123	Tupaia_belangeri
ENSSHAG00000004503	PRDM10	99	85.542	ENSTTRG00000009189	PRDM10	99	84.755	Tursiops_truncatus
ENSSHAG00000004503	PRDM10	94	85.960	ENSUAMG00000018832	PRDM10	94	90.596	Ursus_americanus
ENSSHAG00000004503	PRDM10	99	85.872	ENSUMAG00000003167	PRDM10	99	87.394	Ursus_maritimus
ENSSHAG00000004503	PRDM10	99	87.080	ENSVVUG00000019878	PRDM10	99	86.466	Vulpes_vulpes
ENSSHAG00000004503	PRDM10	99	69.800	ENSXETG00000032173	PRDM10	99	70.050	Xenopus_tropicalis