EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000004600 (Gene tree)
Gene ID: 100934235
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 95347 bases
Position: chrGL841160.1:112373-207719
Accession: 100934235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005258	rRNA_proc-arch	PF13234.6	2.9e-86	1	1
ENSSHAP00000005258	DEAD	PF00270.29	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000005310	MTREX-201	3096	XM_012541030	ENSSHAP00000005258	997 (aa)	XP_012396484	G3VQ03

Gene Model

Click here to download ENSSHAG00000004600's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000004600	MTREX	99	34.560	ENSSHAG00000008963	SKIV2L	81	33.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004600	MTREX	100	95.386	ENSG00000039123	MTREX	96	95.386	Homo_sapiens
ENSSHAG00000004600	MTREX	99	85.844	ENSAPOG00000007814	mtrex	95	85.844	Acanthochromis_polyacanthus
ENSSHAG00000004600	MTREX	100	95.391	ENSAMEG00000013856	MTREX	96	95.391	Ailuropoda_melanoleuca
ENSSHAG00000004600	MTREX	95	87.448	ENSACIG00000015117	mtrex	96	87.448	Amphilophus_citrinellus
ENSSHAG00000004600	MTREX	99	85.844	ENSAOCG00000011884	mtrex	95	85.844	Amphiprion_ocellaris
ENSSHAG00000004600	MTREX	99	85.743	ENSAPEG00000019384	mtrex	95	85.743	Amphiprion_percula
ENSSHAG00000004600	MTREX	100	85.329	ENSATEG00000015117	mtrex	96	85.329	Anabas_testudineus
ENSSHAG00000004600	MTREX	99	92.354	ENSAPLG00000009694	MTREX	99	92.354	Anas_platyrhynchos
ENSSHAG00000004600	MTREX	100	92.778	ENSACAG00000015200	MTREX	93	92.778	Anolis_carolinensis
ENSSHAG00000004600	MTREX	100	95.386	ENSANAG00000023095	MTREX	98	95.386	Aotus_nancymaae
ENSSHAG00000004600	MTREX	98	85.497	ENSACLG00000001921	mtrex	95	85.598	Astatotilapia_calliptera
ENSSHAG00000004600	MTREX	93	86.975	ENSAMXG00000018751	mtrex	95	85.579	Astyanax_mexicanus
ENSSHAG00000004600	MTREX	99	95.573	ENSBTAG00000010518	MTREX	96	95.573	Bos_taurus
ENSSHAG00000004600	MTREX	94	53.625	WBGene00012342	mtr-4	94	52.887	Caenorhabditis_elegans
ENSSHAG00000004600	MTREX	100	95.386	ENSCJAG00000001773	MTREX	97	95.386	Callithrix_jacchus
ENSSHAG00000004600	MTREX	100	95.587	ENSCAFG00000006818	MTREX	96	95.587	Canis_familiaris
ENSSHAG00000004600	MTREX	100	95.587	ENSCAFG00020024352	MTREX	96	95.587	Canis_lupus_dingo
ENSSHAG00000004600	MTREX	99	95.473	ENSCHIG00000024413	MTREX	95	95.473	Capra_hircus
ENSSHAG00000004600	MTREX	94	94.434	ENSTSYG00000007389	MTREX	95	94.434	Carlito_syrichta
ENSSHAG00000004600	MTREX	100	70.641	ENSCAPG00000008696	MTREX	100	70.641	Cavia_aperea
ENSSHAG00000004600	MTREX	100	95.587	ENSCPOG00000009797	MTREX	96	95.587	Cavia_porcellus
ENSSHAG00000004600	MTREX	100	95.286	ENSCCAG00000014177	MTREX	96	95.286	Cebus_capucinus
ENSSHAG00000004600	MTREX	100	95.386	ENSCATG00000042153	MTREX	96	95.386	Cercocebus_atys
ENSSHAG00000004600	MTREX	100	95.286	ENSCLAG00000006622	MTREX	96	95.286	Chinchilla_lanigera
ENSSHAG00000004600	MTREX	100	90.900	ENSCSAG00000016445	MTREX	96	90.900	Chlorocebus_sabaeus
ENSSHAG00000004600	MTREX	68	98.611	ENSCHOG00000010936	-	66	98.611	Choloepus_hoffmanni
ENSSHAG00000004600	MTREX	99	94.183	ENSCPBG00000026551	MTREX	90	94.188	Chrysemys_picta_bellii
ENSSHAG00000004600	MTREX	95	70.772	ENSCING00000003239	-	93	70.772	Ciona_intestinalis
ENSSHAG00000004600	MTREX	95	69.479	ENSCSAVG00000009304	-	100	70.430	Ciona_savignyi
ENSSHAG00000004600	MTREX	100	95.386	ENSCANG00000035770	MTREX	96	95.386	Colobus_angolensis_palliatus
ENSSHAG00000004600	MTREX	100	95.186	ENSCGRG00001024680	Mtrex	96	95.186	Cricetulus_griseus_chok1gshd
ENSSHAG00000004600	MTREX	100	95.186	ENSCGRG00000000307	Mtrex	96	95.186	Cricetulus_griseus_crigri
ENSSHAG00000004600	MTREX	100	83.832	ENSCSEG00000018621	mtrex	94	84.861	Cynoglossus_semilaevis
ENSSHAG00000004600	MTREX	98	86.815	ENSCVAG00000004556	mtrex	95	86.802	Cyprinodon_variegatus
ENSSHAG00000004600	MTREX	99	87.161	ENSDARG00000013457	mtrex	96	87.161	Danio_rerio
ENSSHAG00000004600	MTREX	100	95.286	ENSDNOG00000015375	MTREX	95	95.286	Dasypus_novemcinctus
ENSSHAG00000004600	MTREX	100	95.286	ENSDORG00000006782	Mtrex	96	95.286	Dipodomys_ordii
ENSSHAG00000004600	MTREX	96	66.389	FBgn0001986	Mtr4	91	66.389	Drosophila_melanogaster
ENSSHAG00000004600	MTREX	90	78.739	ENSETEG00000000727	MTREX	86	78.739	Echinops_telfairi
ENSSHAG00000004600	MTREX	98	77.449	ENSEBUG00000012869	mtrex	95	77.449	Eptatretus_burgeri
ENSSHAG00000004600	MTREX	100	95.386	ENSEASG00005013270	MTREX	96	95.386	Equus_asinus_asinus
ENSSHAG00000004600	MTREX	100	95.486	ENSECAG00000023723	MTREX	96	95.486	Equus_caballus
ENSSHAG00000004600	MTREX	98	86.429	ENSEEUG00000000527	MTREX	96	86.429	Erinaceus_europaeus
ENSSHAG00000004600	MTREX	96	88.994	ENSELUG00000004898	mtrex	100	89.916	Esox_lucius
ENSSHAG00000004600	MTREX	100	95.486	ENSFCAG00000010575	MTREX	96	95.486	Felis_catus
ENSSHAG00000004600	MTREX	100	91.775	ENSFALG00000010850	MTREX	96	91.775	Ficedula_albicollis
ENSSHAG00000004600	MTREX	100	94.985	ENSFDAG00000011199	MTREX	96	94.985	Fukomys_damarensis
ENSSHAG00000004600	MTREX	98	86.105	ENSFHEG00000023014	mtrex	93	87.774	Fundulus_heteroclitus
ENSSHAG00000004600	MTREX	99	82.193	ENSGMOG00000014702	mtrex	96	82.596	Gadus_morhua
ENSSHAG00000004600	MTREX	100	93.180	ENSGALG00000014709	MTREX	83	93.180	Gallus_gallus
ENSSHAG00000004600	MTREX	99	84.995	ENSGAFG00000012425	mtrex	98	87.397	Gambusia_affinis
ENSSHAG00000004600	MTREX	99	81.883	ENSGACG00000016260	mtrex	96	85.109	Gasterosteus_aculeatus
ENSSHAG00000004600	MTREX	100	93.888	ENSGAGG00000020036	MTREX	96	93.888	Gopherus_agassizii
ENSSHAG00000004600	MTREX	100	95.486	ENSGGOG00000001867	MTREX	96	95.486	Gorilla_gorilla
ENSSHAG00000004600	MTREX	98	85.497	ENSHBUG00000006229	mtrex	95	85.598	Haplochromis_burtoni
ENSSHAG00000004600	MTREX	100	94.985	ENSHGLG00000019445	SKIV2L2	96	94.985	Heterocephalus_glaber_female
ENSSHAG00000004600	MTREX	100	94.985	ENSHGLG00100011833	SKIV2L2	96	94.985	Heterocephalus_glaber_male
ENSSHAG00000004600	MTREX	95	84.318	ENSHCOG00000019995	mtrex	100	84.318	Hippocampus_comes
ENSSHAG00000004600	MTREX	99	87.741	ENSIPUG00000024348	skiv2l2	95	87.741	Ictalurus_punctatus
ENSSHAG00000004600	MTREX	100	95.286	ENSSTOG00000010802	MTREX	96	95.286	Ictidomys_tridecemlineatus
ENSSHAG00000004600	MTREX	100	88.867	ENSJJAG00000020975	Mtrex	96	88.867	Jaculus_jaculus
ENSSHAG00000004600	MTREX	99	85.425	ENSKMAG00000012642	mtrex	96	86.562	Kryptolebias_marmoratus
ENSSHAG00000004600	MTREX	98	85.497	ENSLBEG00000019367	mtrex	99	85.401	Labrus_bergylta
ENSSHAG00000004600	MTREX	99	90.679	ENSLACG00000009075	MTREX	96	90.679	Latimeria_chalumnae
ENSSHAG00000004600	MTREX	100	89.089	ENSLOCG00000010186	mtrex	97	89.089	Lepisosteus_oculatus
ENSSHAG00000004600	MTREX	99	92.879	ENSLAFG00000010497	MTREX	96	92.879	Loxodonta_africana
ENSSHAG00000004600	MTREX	100	95.386	ENSMFAG00000031610	MTREX	96	95.386	Macaca_fascicularis
ENSSHAG00000004600	MTREX	98	95.710	ENSMMUG00000010379	MTREX	94	95.710	Macaca_mulatta
ENSSHAG00000004600	MTREX	100	95.386	ENSMNEG00000032746	MTREX	96	95.386	Macaca_nemestrina
ENSSHAG00000004600	MTREX	100	95.386	ENSMLEG00000041051	MTREX	96	95.386	Mandrillus_leucophaeus
ENSSHAG00000004600	MTREX	98	86.322	ENSMAMG00000016753	mtrex	96	88.297	Mastacembelus_armatus
ENSSHAG00000004600	MTREX	98	85.497	ENSMZEG00005000414	mtrex	95	85.598	Maylandia_zebra
ENSSHAG00000004600	MTREX	99	67.341	ENSMGAG00000003980	MTREX	100	67.341	Meleagris_gallopavo
ENSSHAG00000004600	MTREX	100	95.386	ENSMAUG00000010727	Mtrex	96	95.386	Mesocricetus_auratus
ENSSHAG00000004600	MTREX	100	95.687	ENSMICG00000012779	MTREX	96	95.687	Microcebus_murinus
ENSSHAG00000004600	MTREX	100	94.985	ENSMOCG00000019886	Mtrex	96	94.985	Microtus_ochrogaster
ENSSHAG00000004600	MTREX	96	86.757	ENSMMOG00000002476	mtrex	96	86.757	Mola_mola
ENSSHAG00000004600	MTREX	100	99.298	ENSMODG00000019494	MTREX	97	99.298	Monodelphis_domestica
ENSSHAG00000004600	MTREX	96	82.293	ENSMALG00000002917	mtrex	99	82.293	Monopterus_albus
ENSSHAG00000004600	MTREX	100	95.085	MGP_CAROLIEiJ_G0018896	Mtrex	96	95.085	Mus_caroli
ENSSHAG00000004600	MTREX	100	95.186	ENSMUSG00000016018	Mtrex	96	95.186	Mus_musculus
ENSSHAG00000004600	MTREX	100	94.885	MGP_PahariEiJ_G0015967	Mtrex	96	94.885	Mus_pahari
ENSSHAG00000004600	MTREX	100	95.186	MGP_SPRETEiJ_G0019775	Mtrex	96	95.186	Mus_spretus
ENSSHAG00000004600	MTREX	100	95.587	ENSMPUG00000007619	MTREX	96	95.587	Mustela_putorius_furo
ENSSHAG00000004600	MTREX	100	94.700	ENSMLUG00000001152	MTREX	96	94.700	Myotis_lucifugus
ENSSHAG00000004600	MTREX	100	94.885	ENSNGAG00000011938	Mtrex	96	94.885	Nannospalax_galili
ENSSHAG00000004600	MTREX	99	85.339	ENSNBRG00000011293	mtrex	95	85.440	Neolamprologus_brichardi
ENSSHAG00000004600	MTREX	100	91.191	ENSNLEG00000001494	MTREX	96	91.191	Nomascus_leucogenys
ENSSHAG00000004600	MTREX	83	100.000	ENSMEUG00000006496	-	80	100.000	Notamacropus_eugenii
ENSSHAG00000004600	MTREX	100	79.739	ENSOPRG00000008009	MTREX	96	79.739	Ochotona_princeps
ENSSHAG00000004600	MTREX	100	94.283	ENSODEG00000017234	MTREX	96	94.283	Octodon_degus
ENSSHAG00000004600	MTREX	99	85.035	ENSONIG00000007587	mtrex	95	85.137	Oreochromis_niloticus
ENSSHAG00000004600	MTREX	51	94.141	ENSOANG00000004885	-	99	94.141	Ornithorhynchus_anatinus
ENSSHAG00000004600	MTREX	100	95.486	ENSOCUG00000004463	MTREX	96	95.486	Oryctolagus_cuniculus
ENSSHAG00000004600	MTREX	99	85.271	ENSORLG00000005443	mtrex	96	85.271	Oryzias_latipes
ENSSHAG00000004600	MTREX	99	85.170	ENSORLG00020006329	mtrex	96	85.170	Oryzias_latipes_hni
ENSSHAG00000004600	MTREX	99	85.271	ENSORLG00015012924	mtrex	96	85.271	Oryzias_latipes_hsok
ENSSHAG00000004600	MTREX	99	84.416	ENSOMEG00000008825	mtrex	96	84.416	Oryzias_melastigma
ENSSHAG00000004600	MTREX	100	95.286	ENSOGAG00000002886	MTREX	96	95.286	Otolemur_garnettii
ENSSHAG00000004600	MTREX	99	95.186	ENSOARG00000007764	MTREX	95	95.186	Ovis_aries
ENSSHAG00000004600	MTREX	100	95.386	ENSPPAG00000039291	MTREX	96	95.386	Pan_paniscus
ENSSHAG00000004600	MTREX	100	95.486	ENSPPRG00000019701	MTREX	96	95.486	Panthera_pardus
ENSSHAG00000004600	MTREX	100	93.882	ENSPTIG00000009313	MTREX	96	93.882	Panthera_tigris_altaica
ENSSHAG00000004600	MTREX	100	95.386	ENSPTRG00000016878	MTREX	96	95.386	Pan_troglodytes
ENSSHAG00000004600	MTREX	100	95.286	ENSPANG00000009697	MTREX	96	95.286	Papio_anubis
ENSSHAG00000004600	MTREX	99	88.677	ENSPKIG00000020833	mtrex	98	88.568	Paramormyrops_kingsleyae
ENSSHAG00000004600	MTREX	99	93.882	ENSPSIG00000012150	MTREX	97	93.888	Pelodiscus_sinensis
ENSSHAG00000004600	MTREX	99	83.916	ENSPMGG00000002582	mtrex	99	83.916	Periophthalmus_magnuspinnatus
ENSSHAG00000004600	MTREX	95	66.982	ENSPMAG00000009668	mtrex	97	66.982	Petromyzon_marinus
ENSSHAG00000004600	MTREX	95	99.894	ENSPCIG00000024730	MTREX	100	99.894	Phascolarctos_cinereus
ENSSHAG00000004600	MTREX	79	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSSHAG00000004600	MTREX	98	86.714	ENSPLAG00000021311	mtrex	95	86.802	Poecilia_latipinna
ENSSHAG00000004600	MTREX	95	87.710	ENSPMEG00000010597	mtrex	99	88.025	Poecilia_mexicana
ENSSHAG00000004600	MTREX	99	84.699	ENSPREG00000003089	mtrex	98	84.783	Poecilia_reticulata
ENSSHAG00000004600	MTREX	98	95.408	ENSPPYG00000015469	MTREX	93	95.408	Pongo_abelii
ENSSHAG00000004600	MTREX	94	79.535	ENSPCAG00000013120	MTREX	89	79.535	Procavia_capensis
ENSSHAG00000004600	MTREX	99	89.956	ENSPCOG00000018092	MTREX	95	89.956	Propithecus_coquereli
ENSSHAG00000004600	MTREX	100	95.386	ENSPVAG00000002445	MTREX	96	95.386	Pteropus_vampyrus
ENSSHAG00000004600	MTREX	98	85.396	ENSPNYG00000006164	mtrex	95	85.497	Pundamilia_nyererei
ENSSHAG00000004600	MTREX	99	87.800	ENSPNAG00000008794	mtrex	96	87.800	Pygocentrus_nattereri
ENSSHAG00000004600	MTREX	99	94.512	ENSRNOG00000010125	Mtrex	92	94.512	Rattus_norvegicus
ENSSHAG00000004600	MTREX	100	93.581	ENSRBIG00000034930	MTREX	96	93.581	Rhinopithecus_bieti
ENSSHAG00000004600	MTREX	100	95.386	ENSRROG00000039895	MTREX	96	95.386	Rhinopithecus_roxellana
ENSSHAG00000004600	MTREX	93	55.194	YJL050W	MTR4	89	55.194	Saccharomyces_cerevisiae
ENSSHAG00000004600	MTREX	100	95.286	ENSSBOG00000026693	MTREX	98	95.286	Saimiri_boliviensis_boliviensis
ENSSHAG00000004600	MTREX	99	89.769	ENSSFOG00015014355	skiv2l2	96	89.769	Scleropages_formosus
ENSSHAG00000004600	MTREX	98	85.801	ENSSMAG00000007572	mtrex	95	85.801	Scophthalmus_maximus
ENSSHAG00000004600	MTREX	100	85.244	ENSSDUG00000023789	mtrex	96	87.280	Seriola_dumerili
ENSSHAG00000004600	MTREX	100	85.145	ENSSLDG00000006301	mtrex	96	87.280	Seriola_lalandi_dorsalis
ENSSHAG00000004600	MTREX	95	96.530	ENSSARG00000008387	MTREX	91	96.530	Sorex_araneus
ENSSHAG00000004600	MTREX	99	81.143	ENSSPUG00000007071	MTREX	96	81.162	Sphenodon_punctatus
ENSSHAG00000004600	MTREX	95	87.080	ENSSPAG00000011319	mtrex	94	87.605	Stegastes_partitus
ENSSHAG00000004600	MTREX	100	95.186	ENSSSCG00000016911	MTREX	96	95.186	Sus_scrofa
ENSSHAG00000004600	MTREX	100	91.274	ENSTGUG00000002480	MTREX	96	91.274	Taeniopygia_guttata
ENSSHAG00000004600	MTREX	99	84.909	ENSTRUG00000014571	mtrex	96	85.389	Takifugu_rubripes
ENSSHAG00000004600	MTREX	100	79.037	ENSTBEG00000007769	MTREX	96	79.037	Tupaia_belangeri
ENSSHAG00000004600	MTREX	100	94.985	ENSTTRG00000008678	MTREX	96	94.985	Tursiops_truncatus
ENSSHAG00000004600	MTREX	99	95.573	ENSUAMG00000023061	MTREX	95	95.573	Ursus_americanus
ENSSHAG00000004600	MTREX	100	94.795	ENSUMAG00000009373	MTREX	99	97.241	Ursus_maritimus
ENSSHAG00000004600	MTREX	100	84.453	ENSVPAG00000011174	MTREX	96	84.453	Vicugna_pacos
ENSSHAG00000004600	MTREX	100	95.687	ENSVVUG00000021337	MTREX	96	95.687	Vulpes_vulpes
ENSSHAG00000004600	MTREX	100	90.281	ENSXETG00000032798	MTREX	97	90.281	Xenopus_tropicalis
ENSSHAG00000004600	MTREX	99	84.798	ENSXMAG00000004799	mtrex	98	87.060	Xiphophorus_maculatus