EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000004727 (Gene tree)
Gene ID: 100924289
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 37441 bases
Position: chrGL841550.1:118768-156208
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005410	zf-CCHC_2	PF13696.6	2.9e-09	1	1
ENSSHAP00000005410	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000005464	-	5391	-	ENSSHAP00000005410	1796 (aa)	-	G3VQF5

Gene Model

Click here to download ENSSHAG00000004727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004727	-	100	85.047	ENSG00000122257	RBBP6	100	98.333	Homo_sapiens
ENSSHAG00000004727	-	56	67.991	ENSACAG00000011794	RBBP6	100	70.668	Anolis_carolinensis
ENSSHAG00000004727	-	100	84.611	ENSANAG00000037384	RBBP6	89	90.930	Aotus_nancymaae
ENSSHAG00000004727	-	100	84.000	ENSCJAG00000020661	RBBP6	89	90.930	Callithrix_jacchus
ENSSHAG00000004727	-	96	83.623	ENSCAFG00000017566	RBBP6	98	83.491	Canis_familiaris
ENSSHAG00000004727	-	94	84.189	ENSTSYG00000000822	RBBP6	89	94.651	Carlito_syrichta
ENSSHAG00000004727	-	86	79.235	ENSCAPG00000012399	RBBP6	92	79.254	Cavia_aperea
ENSSHAG00000004727	-	94	81.926	ENSCPOG00000040025	RBBP6	94	81.936	Cavia_porcellus
ENSSHAG00000004727	-	100	84.389	ENSCCAG00000023229	RBBP6	89	94.419	Cebus_capucinus
ENSSHAG00000004727	-	100	84.603	ENSCATG00000033601	RBBP6	89	94.186	Cercocebus_atys
ENSSHAG00000004727	-	100	84.603	ENSCSAG00000006609	RBBP6	94	84.111	Chlorocebus_sabaeus
ENSSHAG00000004727	-	61	91.577	ENSCHOG00000000278	RBBP6	63	91.525	Choloepus_hoffmanni
ENSSHAG00000004727	-	89	80.880	ENSCPBG00000001818	RBBP6	94	81.298	Chrysemys_picta_bellii
ENSSHAG00000004727	-	100	84.658	ENSCANG00000039613	RBBP6	89	93.953	Colobus_angolensis_palliatus
ENSSHAG00000004727	-	94	81.239	ENSCGRG00001017193	Rbbp6	94	81.287	Cricetulus_griseus_chok1gshd
ENSSHAG00000004727	-	94	81.239	ENSCGRG00000011887	Rbbp6	94	81.287	Cricetulus_griseus_crigri
ENSSHAG00000004727	-	100	85.000	ENSDNOG00000048802	RBBP6	94	84.357	Dasypus_novemcinctus
ENSSHAG00000004727	-	96	80.613	ENSDORG00000010285	Rbbp6	95	80.978	Dipodomys_ordii
ENSSHAG00000004727	-	94	84.366	ENSFCAG00000043694	RBBP6	89	95.814	Felis_catus
ENSSHAG00000004727	-	94	81.722	ENSFDAG00000013132	RBBP6	94	82.145	Fukomys_damarensis
ENSSHAG00000004727	-	81	82.061	ENSGALG00000006043	RBBP6	82	81.679	Gallus_gallus
ENSSHAG00000004727	-	89	82.409	ENSGAGG00000004371	RBBP6	93	82.409	Gopherus_agassizii
ENSSHAG00000004727	-	100	84.769	ENSGGOG00000007137	RBBP6	89	94.419	Gorilla_gorilla
ENSSHAG00000004727	-	94	81.748	ENSHGLG00000008327	RBBP6	94	81.759	Heterocephalus_glaber_female
ENSSHAG00000004727	-	96	77.125	ENSHGLG00100007773	RBBP6	55	89.522	Heterocephalus_glaber_male
ENSSHAG00000004727	-	94	82.322	ENSSTOG00000016006	RBBP6	94	84.475	Ictidomys_tridecemlineatus
ENSSHAG00000004727	-	94	79.623	ENSJJAG00000014549	Rbbp6	94	80.259	Jaculus_jaculus
ENSSHAG00000004727	-	94	84.307	ENSLAFG00000009528	RBBP6	94	84.357	Loxodonta_africana
ENSSHAG00000004727	-	100	84.658	ENSMFAG00000038627	RBBP6	89	94.419	Macaca_fascicularis
ENSSHAG00000004727	-	100	84.714	ENSMMUG00000015908	RBBP6	89	94.419	Macaca_mulatta
ENSSHAG00000004727	-	100	84.603	ENSMNEG00000033630	RBBP6	89	94.419	Macaca_nemestrina
ENSSHAG00000004727	-	100	84.658	ENSMLEG00000030073	RBBP6	89	94.419	Mandrillus_leucophaeus
ENSSHAG00000004727	-	94	84.770	ENSMICG00000008059	RBBP6	100	85.381	Microcebus_murinus
ENSSHAG00000004727	-	100	92.058	ENSMODG00000016318	-	100	92.058	Monodelphis_domestica
ENSSHAG00000004727	-	66	88.643	MGP_CAROLIEiJ_G0030424	-	98	87.003	Mus_caroli
ENSSHAG00000004727	-	94	80.307	ENSMUSG00000030779	Rbbp6	98	78.592	Mus_musculus
ENSSHAG00000004727	-	94	79.611	MGP_PahariEiJ_G0013634	Rbbp6	94	79.658	Mus_pahari
ENSSHAG00000004727	-	94	80.248	MGP_SPRETEiJ_G0031538	Rbbp6	94	80.295	Mus_spretus
ENSSHAG00000004727	-	94	83.559	ENSMLUG00000010601	-	94	83.550	Myotis_lucifugus
ENSSHAG00000004727	-	94	91.037	ENSNLEG00000011896	RBBP6	99	91.037	Nomascus_leucogenys
ENSSHAG00000004727	-	90	94.318	ENSMEUG00000014491	RBBP6	90	94.318	Notamacropus_eugenii
ENSSHAG00000004727	-	58	92.402	ENSOPRG00000016272	RBBP6	59	92.402	Ochotona_princeps
ENSSHAG00000004727	-	94	82.006	ENSOANG00000007673	RBBP6	94	82.579	Ornithorhynchus_anatinus
ENSSHAG00000004727	-	98	79.853	ENSOCUG00000004346	RBBP6	97	81.453	Oryctolagus_cuniculus
ENSSHAG00000004727	-	94	84.552	ENSOGAG00000026986	RBBP6	94	84.661	Otolemur_garnettii
ENSSHAG00000004727	-	100	84.325	ENSPPAG00000023595	RBBP6	94	83.816	Pan_paniscus
ENSSHAG00000004727	-	94	84.307	ENSPPRG00000004074	RBBP6	89	95.581	Panthera_pardus
ENSSHAG00000004727	-	94	84.366	ENSPTIG00000010342	RBBP6	89	95.581	Panthera_tigris_altaica
ENSSHAG00000004727	-	100	84.992	ENSPTRG00000007897	RBBP6	89	94.651	Pan_troglodytes
ENSSHAG00000004727	-	100	84.769	ENSPANG00000019625	RBBP6	89	94.651	Papio_anubis
ENSSHAG00000004727	-	100	95.422	ENSPCIG00000014000	RBBP6	100	95.422	Phascolarctos_cinereus
ENSSHAG00000004727	-	100	85.325	ENSPCOG00000021939	RBBP6	100	94.186	Propithecus_coquereli
ENSSHAG00000004727	-	60	85.299	ENSPVAG00000001110	RBBP6	81	85.061	Pteropus_vampyrus
ENSSHAG00000004727	-	94	80.012	ENSRNOG00000012806	Rbbp6	94	80.472	Rattus_norvegicus
ENSSHAG00000004727	-	87	85.299	ENSRBIG00000004517	RBBP6	94	86.456	Rhinopithecus_bieti
ENSSHAG00000004727	-	100	84.769	ENSRROG00000032092	RBBP6	89	94.419	Rhinopithecus_roxellana
ENSSHAG00000004727	-	100	84.278	ENSSBOG00000021666	RBBP6	89	90.930	Saimiri_boliviensis_boliviensis
ENSSHAG00000004727	-	89	79.479	ENSSARG00000004977	RBBP6	94	79.777	Sorex_araneus
ENSSHAG00000004727	-	100	84.620	ENSSSCG00000007830	RBBP6	94	84.002	Sus_scrofa
ENSSHAG00000004727	-	100	82.252	ENSTTRG00000002696	RBBP6	100	82.161	Tursiops_truncatus
ENSSHAG00000004727	-	67	86.630	ENSVPAG00000006458	RBBP6	79	86.630	Vicugna_pacos
ENSSHAG00000004727	-	94	84.090	ENSVVUG00000005484	RBBP6	94	84.139	Vulpes_vulpes