EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000004840 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 3983 bases
Position: chrGL849522.1:124749-128731
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005539	PseudoU_synth_1	PF01416.20	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000005593	-	576	-	ENSSHAP00000005539	192 (aa)	-	G3VQT4

Gene Model

Click here to download ENSSHAG00000004840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004840	-	85	61.585	ENSG00000169972	PUSL1	50	66.667	Homo_sapiens
ENSSHAG00000004840	-	85	60.976	ENSAMEG00000013752	PUSL1	50	65.333	Ailuropoda_melanoleuca
ENSSHAG00000004840	-	76	50.336	ENSACIG00000015240	pusl1	54	50.336	Amphilophus_citrinellus
ENSSHAG00000004840	-	84	49.390	ENSATEG00000024154	pusl1	51	52.941	Anabas_testudineus
ENSSHAG00000004840	-	86	50.898	ENSAPLG00000004946	PUSL1	56	50.898	Anas_platyrhynchos
ENSSHAG00000004840	-	73	62.238	ENSACAG00000014111	PUSL1	52	63.043	Anolis_carolinensis
ENSSHAG00000004840	-	85	66.061	ENSANAG00000037456	PUSL1	50	71.523	Aotus_nancymaae
ENSSHAG00000004840	-	84	47.239	ENSACLG00000008675	pusl1	50	51.880	Astatotilapia_calliptera
ENSSHAG00000004840	-	85	49.390	ENSAMXG00000044007	pusl1	51	53.285	Astyanax_mexicanus
ENSSHAG00000004840	-	86	61.677	ENSBTAG00000007619	PUSL1	52	66.000	Bos_taurus
ENSSHAG00000004840	-	85	66.061	ENSCJAG00000010972	PUSL1	50	71.523	Callithrix_jacchus
ENSSHAG00000004840	-	80	65.605	ENSCAFG00000019291	PUSL1	55	62.130	Canis_familiaris
ENSSHAG00000004840	-	85	61.585	ENSCAFG00020011568	PUSL1	50	53.158	Canis_lupus_dingo
ENSSHAG00000004840	-	85	60.976	ENSCHIG00000012615	PUSL1	52	65.333	Capra_hircus
ENSSHAG00000004840	-	85	65.455	ENSCCAG00000027475	PUSL1	50	70.861	Cebus_capucinus
ENSSHAG00000004840	-	85	62.805	ENSCATG00000018260	PUSL1	50	68.000	Cercocebus_atys
ENSSHAG00000004840	-	85	62.805	ENSCSAG00000000680	PUSL1	50	68.000	Chlorocebus_sabaeus
ENSSHAG00000004840	-	86	53.293	ENSCPBG00000022621	PUSL1	57	53.293	Chrysemys_picta_bellii
ENSSHAG00000004840	-	85	63.415	ENSCANG00000034373	PUSL1	50	68.667	Colobus_angolensis_palliatus
ENSSHAG00000004840	-	89	56.725	ENSCGRG00001012429	Pusl1	52	62.000	Cricetulus_griseus_chok1gshd
ENSSHAG00000004840	-	89	56.140	ENSCGRG00000006466	Pusl1	52	61.333	Cricetulus_griseus_crigri
ENSSHAG00000004840	-	85	47.904	ENSCSEG00000005159	pusl1	50	51.678	Cynoglossus_semilaevis
ENSSHAG00000004840	-	85	45.122	ENSDARG00000074565	pusl1	54	47.712	Danio_rerio
ENSSHAG00000004840	-	78	61.438	ENSEEUG00000000837	PUSL1	52	61.438	Erinaceus_europaeus
ENSSHAG00000004840	-	86	46.429	ENSELUG00000015945	pusl1	51	49.669	Esox_lucius
ENSSHAG00000004840	-	85	62.805	ENSFCAG00000007617	PUSL1	50	67.333	Felis_catus
ENSSHAG00000004840	-	57	50.000	ENSFALG00000009264	-	96	50.000	Ficedula_albicollis
ENSSHAG00000004840	-	84	49.080	ENSFHEG00000006370	pusl1	50	52.667	Fundulus_heteroclitus
ENSSHAG00000004840	-	84	48.485	ENSGMOG00000019388	pusl1	50	53.191	Gadus_morhua
ENSSHAG00000004840	-	86	49.701	ENSGALG00000001714	PUSL1	55	52.381	Gallus_gallus
ENSSHAG00000004840	-	87	53.571	ENSGAGG00000004730	PUSL1	58	53.571	Gopherus_agassizii
ENSSHAG00000004840	-	67	70.769	ENSGGOG00000005364	PUSL1	50	70.769	Gorilla_gorilla
ENSSHAG00000004840	-	84	47.879	ENSHBUG00000001264	pusl1	52	51.948	Haplochromis_burtoni
ENSSHAG00000004840	-	78	66.667	ENSHGLG00100007641	PUSL1	50	66.667	Heterocephalus_glaber_male
ENSSHAG00000004840	-	84	47.305	ENSHCOG00000010077	pusl1	51	56.934	Hippocampus_comes
ENSSHAG00000004840	-	86	46.108	ENSIPUG00000023921	pusl1	52	49.333	Ictalurus_punctatus
ENSSHAG00000004840	-	89	60.588	ENSJJAG00000020471	Pusl1	51	66.443	Jaculus_jaculus
ENSSHAG00000004840	-	77	52.000	ENSKMAG00000005154	pusl1	51	52.000	Kryptolebias_marmoratus
ENSSHAG00000004840	-	84	50.000	ENSLBEG00000013469	pusl1	52	53.333	Labrus_bergylta
ENSSHAG00000004840	-	68	56.061	ENSLACG00000018795	PUSL1	65	56.061	Latimeria_chalumnae
ENSSHAG00000004840	-	84	49.383	ENSLOCG00000002210	pusl1	52	51.634	Lepisosteus_oculatus
ENSSHAG00000004840	-	78	69.333	ENSLAFG00000013685	PUSL1	56	69.333	Loxodonta_africana
ENSSHAG00000004840	-	85	62.805	ENSMFAG00000046288	PUSL1	50	68.000	Macaca_fascicularis
ENSSHAG00000004840	-	85	63.415	ENSMNEG00000037989	PUSL1	50	68.667	Macaca_nemestrina
ENSSHAG00000004840	-	84	47.239	ENSMZEG00005026990	pusl1	50	51.678	Maylandia_zebra
ENSSHAG00000004840	-	86	50.299	ENSMGAG00000003037	PUSL1	57	50.299	Meleagris_gallopavo
ENSSHAG00000004840	-	89	57.895	ENSMAUG00000019924	Pusl1	52	63.333	Mesocricetus_auratus
ENSSHAG00000004840	-	85	60.976	ENSMICG00000014171	PUSL1	51	65.333	Microcebus_murinus
ENSSHAG00000004840	-	89	58.480	ENSMOCG00000005602	Pusl1	52	64.000	Microtus_ochrogaster
ENSSHAG00000004840	-	71	55.396	ENSMMOG00000003269	pusl1	53	52.980	Mola_mola
ENSSHAG00000004840	-	85	58.537	MGP_CAROLIEiJ_G0026911	Pusl1	52	62.667	Mus_caroli
ENSSHAG00000004840	-	85	57.317	ENSMUSG00000051557	Pusl1	52	61.333	Mus_musculus
ENSSHAG00000004840	-	85	58.537	MGP_PahariEiJ_G0029260	Pusl1	52	62.667	Mus_pahari
ENSSHAG00000004840	-	85	57.317	MGP_SPRETEiJ_G0027906	Pusl1	52	61.333	Mus_spretus
ENSSHAG00000004840	-	90	61.272	ENSMPUG00000014313	PUSL1	50	68.000	Mustela_putorius_furo
ENSSHAG00000004840	-	77	70.470	ENSNLEG00000000051	PUSL1	54	70.470	Nomascus_leucogenys
ENSSHAG00000004840	-	87	79.641	ENSMEUG00000011649	-	59	79.641	Notamacropus_eugenii
ENSSHAG00000004840	-	67	70.543	ENSMEUG00000005176	-	50	70.543	Notamacropus_eugenii
ENSSHAG00000004840	-	84	47.853	ENSONIG00000019361	pusl1	50	52.349	Oreochromis_niloticus
ENSSHAG00000004840	-	84	47.561	ENSORLG00000016228	pusl1	52	49.677	Oryzias_latipes
ENSSHAG00000004840	-	84	48.171	ENSORLG00020013710	pusl1	52	50.323	Oryzias_latipes_hni
ENSSHAG00000004840	-	84	48.193	ENSORLG00015008715	pusl1	53	51.299	Oryzias_latipes_hsok
ENSSHAG00000004840	-	84	46.951	ENSOMEG00000018897	pusl1	52	50.000	Oryzias_melastigma
ENSSHAG00000004840	-	85	60.976	ENSOGAG00000031692	PUSL1	52	65.333	Otolemur_garnettii
ENSSHAG00000004840	-	78	65.333	ENSOARG00000004905	PUSL1	56	65.333	Ovis_aries
ENSSHAG00000004840	-	85	62.195	ENSPPAG00000029283	PUSL1	50	67.333	Pan_paniscus
ENSSHAG00000004840	-	84	63.580	ENSPPRG00000023329	PUSL1	50	67.333	Panthera_pardus
ENSSHAG00000004840	-	77	67.785	ENSPTIG00000018532	PUSL1	55	67.785	Panthera_tigris_altaica
ENSSHAG00000004840	-	85	62.195	ENSPTRG00000000021	PUSL1	50	67.333	Pan_troglodytes
ENSSHAG00000004840	-	84	63.580	ENSPANG00000000591	PUSL1	50	68.000	Papio_anubis
ENSSHAG00000004840	-	84	49.383	ENSPKIG00000002447	pusl1	52	52.000	Paramormyrops_kingsleyae
ENSSHAG00000004840	-	71	58.696	ENSPSIG00000002781	PUSL1	51	58.696	Pelodiscus_sinensis
ENSSHAG00000004840	-	75	48.299	ENSPMGG00000011051	pusl1	53	47.973	Periophthalmus_magnuspinnatus
ENSSHAG00000004840	-	89	57.310	ENSPEMG00000013541	Pusl1	52	62.667	Peromyscus_maniculatus_bairdii
ENSSHAG00000004840	-	84	48.466	ENSPFOG00000015448	pusl1	52	52.703	Poecilia_formosa
ENSSHAG00000004840	-	84	48.466	ENSPLAG00000004348	pusl1	50	52.703	Poecilia_latipinna
ENSSHAG00000004840	-	84	48.466	ENSPMEG00000000931	pusl1	50	52.703	Poecilia_mexicana
ENSSHAG00000004840	-	84	47.239	ENSPREG00000002324	pusl1	50	51.351	Poecilia_reticulata
ENSSHAG00000004840	-	80	61.688	ENSPPYG00000002014	PUSL1	54	61.688	Pongo_abelii
ENSSHAG00000004840	-	67	72.308	ENSPCAG00000002272	PUSL1	54	72.308	Procavia_capensis
ENSSHAG00000004840	-	84	47.239	ENSPNYG00000006588	pusl1	62	51.678	Pundamilia_nyererei
ENSSHAG00000004840	-	85	49.390	ENSPNAG00000024441	pusl1	53	51.634	Pygocentrus_nattereri
ENSSHAG00000004840	-	89	59.064	ENSRNOG00000022354	Pusl1	52	64.667	Rattus_norvegicus
ENSSHAG00000004840	-	85	62.805	ENSRBIG00000036842	PUSL1	50	68.000	Rhinopithecus_bieti
ENSSHAG00000004840	-	85	62.805	ENSRROG00000030704	PUSL1	50	68.000	Rhinopithecus_roxellana
ENSSHAG00000004840	-	77	70.667	ENSSBOG00000032249	PUSL1	54	70.667	Saimiri_boliviensis_boliviensis
ENSSHAG00000004840	-	77	67.568	ENSSARG00000005323	-	79	67.568	Sorex_araneus
ENSSHAG00000004840	-	77	50.667	ENSSPAG00000002528	pusl1	59	50.667	Stegastes_partitus
ENSSHAG00000004840	-	84	53.086	ENSTGUG00000003214	PUSL1	53	56.000	Taeniopygia_guttata
ENSSHAG00000004840	-	85	46.988	ENSTRUG00000010102	pusl1	51	50.658	Takifugu_rubripes
ENSSHAG00000004840	-	86	50.602	ENSXETG00000011145	pusl1	65	55.034	Xenopus_tropicalis