EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000004960 (Gene tree)
Gene ID: 100928630
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 51912 bases
Position: chrGL849754.1:131273-183184
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005677	RRM_5	PF13893.6	5.1e-07	1	2
ENSSHAP00000005677	RRM_5	PF13893.6	5.1e-07	2	2
ENSSHAP00000005676	RRM_5	PF13893.6	5.2e-07	1	2
ENSSHAP00000005676	RRM_5	PF13893.6	5.2e-07	2	2
ENSSHAP00000005678	RRM_5	PF13893.6	1.8e-06	1	1
ENSSHAP00000005677	RRM_1	PF00076.22	5.8e-35	1	2
ENSSHAP00000005677	RRM_1	PF00076.22	5.8e-35	2	2
ENSSHAP00000005676	RRM_1	PF00076.22	6e-35	1	2
ENSSHAP00000005676	RRM_1	PF00076.22	6e-35	2	2
ENSSHAP00000005678	RRM_1	PF00076.22	2.6e-29	1	3
ENSSHAP00000005678	RRM_1	PF00076.22	2.6e-29	2	3
ENSSHAP00000005678	RRM_1	PF00076.22	2.6e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000005731	SPEN-202	10641	-	ENSSHAP00000005677	3546 (aa)	-	G3VR72
ENSSHAT00000005730	SPEN-201	10728	-	ENSSHAP00000005676	3575 (aa)	-	G3VR71
ENSSHAT00000005732	SPEN-203	1596	-	ENSSHAP00000005678	532 (aa)	-	G3VR73

Gene Model

Click here to download ENSSHAG00000004960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000004960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000004960	SPEN	99	93.182	ENSG00000065526	SPEN	85	94.048	Homo_sapiens
ENSSHAG00000004960	SPEN	98	79.614	ENSAPOG00000009853	-	83	71.371	Acanthochromis_polyacanthus
ENSSHAG00000004960	SPEN	99	69.274	ENSAPOG00000011411	si:ch1073-335m2.2	69	80.702	Acanthochromis_polyacanthus
ENSSHAG00000004960	SPEN	98	94.444	ENSAMEG00000011817	SPEN	72	70.794	Ailuropoda_melanoleuca
ENSSHAG00000004960	SPEN	61	66.460	ENSAOCG00000008077	si:ch1073-335m2.2	70	66.460	Amphiprion_ocellaris
ENSSHAG00000004960	SPEN	98	79.890	ENSAOCG00000014505	-	99	45.802	Amphiprion_ocellaris
ENSSHAG00000004960	SPEN	99	69.274	ENSAPEG00000013515	si:ch1073-335m2.2	72	80.702	Amphiprion_percula
ENSSHAG00000004960	SPEN	98	79.890	ENSAPEG00000010288	-	99	45.842	Amphiprion_percula
ENSSHAG00000004960	SPEN	99	68.646	ENSATEG00000007674	si:ch1073-335m2.2	60	76.374	Anabas_testudineus
ENSSHAG00000004960	SPEN	98	80.441	ENSATEG00000005627	-	68	47.971	Anabas_testudineus
ENSSHAG00000004960	SPEN	98	94.656	ENSAPLG00000012618	SPEN	100	75.194	Anas_platyrhynchos
ENSSHAG00000004960	SPEN	97	85.206	ENSACAG00000013761	SPEN	100	65.520	Anolis_carolinensis
ENSSHAG00000004960	SPEN	99	68.166	ENSACLG00000016922	-	100	44.940	Astatotilapia_calliptera
ENSSHAG00000004960	SPEN	97	81.543	ENSAMXG00000012485	spen	99	46.984	Astyanax_mexicanus
ENSSHAG00000004960	SPEN	99	92.992	ENSBTAG00000018729	SPEN	97	71.493	Bos_taurus
ENSSHAG00000004960	SPEN	99	93.182	ENSCJAG00000008527	SPEN	96	70.885	Callithrix_jacchus
ENSSHAG00000004960	SPEN	99	93.561	ENSCAFG00000016132	-	94	70.175	Canis_familiaris
ENSSHAG00000004960	SPEN	92	68.812	ENSTSYG00000036016	SPEN	98	66.862	Carlito_syrichta
ENSSHAG00000004960	SPEN	98	93.295	ENSCAPG00000013803	SPEN	100	67.417	Cavia_aperea
ENSSHAG00000004960	SPEN	98	93.282	ENSCPOG00000014036	SPEN	100	66.065	Cavia_porcellus
ENSSHAG00000004960	SPEN	93	78.182	ENSCCAG00000020258	SPEN	97	67.349	Cebus_capucinus
ENSSHAG00000004960	SPEN	99	93.182	ENSCATG00000015079	SPEN	70	93.913	Cercocebus_atys
ENSSHAG00000004960	SPEN	98	93.474	ENSCLAG00000002018	SPEN	100	66.519	Chinchilla_lanigera
ENSSHAG00000004960	SPEN	99	93.182	ENSCSAG00000000841	SPEN	72	71.332	Chlorocebus_sabaeus
ENSSHAG00000004960	SPEN	99	94.129	ENSCPBG00000010477	SPEN	99	75.890	Chrysemys_picta_bellii
ENSSHAG00000004960	SPEN	99	93.951	ENSCANG00000034547	SPEN	96	69.891	Colobus_angolensis_palliatus
ENSSHAG00000004960	SPEN	98	79.396	ENSCSEG00000003915	-	99	44.944	Cynoglossus_semilaevis
ENSSHAG00000004960	SPEN	99	70.069	ENSCVAG00000016346	-	94	48.495	Cyprinodon_variegatus
ENSSHAG00000004960	SPEN	99	68.715	ENSCVAG00000009075	si:ch1073-335m2.2	73	76.064	Cyprinodon_variegatus
ENSSHAG00000004960	SPEN	99	67.904	ENSDARG00000074332	si:ch1073-335m2.2	88	69.340	Danio_rerio
ENSSHAG00000004960	SPEN	99	73.276	ENSDARG00000074245	spen	84	82.456	Danio_rerio
ENSSHAG00000004960	SPEN	99	92.279	ENSDNOG00000041948	SPEN	96	71.583	Dasypus_novemcinctus
ENSSHAG00000004960	SPEN	99	93.169	ENSDORG00000023909	Spen	100	64.347	Dipodomys_ordii
ENSSHAG00000004960	SPEN	69	96.947	ENSETEG00000016692	-	66	96.250	Echinops_telfairi
ENSSHAG00000004960	SPEN	99	93.371	ENSEASG00005015911	SPEN	97	94.737	Equus_asinus_asinus
ENSSHAG00000004960	SPEN	99	93.371	ENSECAG00000008833	SPEN	97	94.737	Equus_caballus
ENSSHAG00000004960	SPEN	91	92.769	ENSEEUG00000010255	SPEN	75	90.698	Erinaceus_europaeus
ENSSHAG00000004960	SPEN	99	68.681	ENSELUG00000007726	si:ch1073-335m2.2	74	78.736	Esox_lucius
ENSSHAG00000004960	SPEN	89	72.467	ENSFALG00000003551	SPEN	100	72.436	Ficedula_albicollis
ENSSHAG00000004960	SPEN	97	93.217	ENSFDAG00000010212	SPEN	97	67.067	Fukomys_damarensis
ENSSHAG00000004960	SPEN	99	66.357	ENSFHEG00000004544	si:ch1073-335m2.2	53	70.388	Fundulus_heteroclitus
ENSSHAG00000004960	SPEN	90	81.250	ENSGMOG00000008397	-	74	51.946	Gadus_morhua
ENSSHAG00000004960	SPEN	99	93.939	ENSGALG00000036932	SPEN	99	75.208	Gallus_gallus
ENSSHAG00000004960	SPEN	99	70.517	ENSGAFG00000015819	-	83	69.636	Gambusia_affinis
ENSSHAG00000004960	SPEN	99	68.030	ENSGAFG00000021570	si:ch1073-335m2.2	94	74.332	Gambusia_affinis
ENSSHAG00000004960	SPEN	99	77.589	ENSGACG00000005341	-	96	48.831	Gasterosteus_aculeatus
ENSSHAG00000004960	SPEN	99	69.963	ENSGACG00000001176	si:ch1073-335m2.2	70	77.059	Gasterosteus_aculeatus
ENSSHAG00000004960	SPEN	99	95.519	ENSGAGG00000020785	SPEN	99	95.519	Gopherus_agassizii
ENSSHAG00000004960	SPEN	99	93.182	ENSGGOG00000012041	SPEN	96	71.541	Gorilla_gorilla
ENSSHAG00000004960	SPEN	99	69.907	ENSHBUG00000023253	si:ch1073-335m2.2	87	64.979	Haplochromis_burtoni
ENSSHAG00000004960	SPEN	99	67.993	ENSHBUG00000020626	-	99	45.344	Haplochromis_burtoni
ENSSHAG00000004960	SPEN	99	92.424	ENSHGLG00000019259	SPEN	84	72.814	Heterocephalus_glaber_female
ENSSHAG00000004960	SPEN	97	92.829	ENSHGLG00100019294	SPEN	81	74.290	Heterocephalus_glaber_male
ENSSHAG00000004960	SPEN	90	67.213	ENSHCOG00000006004	si:ch1073-335m2.2	70	79.389	Hippocampus_comes
ENSSHAG00000004960	SPEN	77	68.434	ENSIPUG00000018212	si:ch1073-335m2.2	91	74.138	Ictalurus_punctatus
ENSSHAG00000004960	SPEN	99	77.358	ENSIPUG00000021668	spen	99	44.587	Ictalurus_punctatus
ENSSHAG00000004960	SPEN	99	91.856	ENSJJAG00000010882	Spen	73	67.831	Jaculus_jaculus
ENSSHAG00000004960	SPEN	98	77.961	ENSKMAG00000003882	-	93	47.508	Kryptolebias_marmoratus
ENSSHAG00000004960	SPEN	99	68.715	ENSKMAG00000021725	si:ch1073-335m2.2	94	79.532	Kryptolebias_marmoratus
ENSSHAG00000004960	SPEN	86	40.458	ENSLBEG00000019129	-	100	40.288	Labrus_bergylta
ENSSHAG00000004960	SPEN	99	70.093	ENSLBEG00000020855	si:ch1073-335m2.2	71	76.923	Labrus_bergylta
ENSSHAG00000004960	SPEN	99	91.856	ENSLACG00000003258	SPEN	71	93.168	Latimeria_chalumnae
ENSSHAG00000004960	SPEN	99	75.000	ENSLOCG00000007896	si:ch1073-335m2.2	99	54.619	Lepisosteus_oculatus
ENSSHAG00000004960	SPEN	99	93.333	ENSLAFG00000004524	SPEN	97	71.375	Loxodonta_africana
ENSSHAG00000004960	SPEN	99	93.182	ENSMFAG00000041974	SPEN	72	71.134	Macaca_fascicularis
ENSSHAG00000004960	SPEN	99	93.182	ENSMMUG00000008026	SPEN	72	71.209	Macaca_mulatta
ENSSHAG00000004960	SPEN	99	93.182	ENSMNEG00000042402	SPEN	72	71.284	Macaca_nemestrina
ENSSHAG00000004960	SPEN	98	94.061	ENSMLEG00000039293	SPEN	72	71.407	Mandrillus_leucophaeus
ENSSHAG00000004960	SPEN	99	69.274	ENSMAMG00000023870	si:ch1073-335m2.2	52	76.667	Mastacembelus_armatus
ENSSHAG00000004960	SPEN	91	43.458	ENSMZEG00005021491	-	99	43.525	Maylandia_zebra
ENSSHAG00000004960	SPEN	100	95.489	ENSMGAG00000005180	-	96	95.489	Meleagris_gallopavo
ENSSHAG00000004960	SPEN	99	92.424	ENSMAUG00000008318	Spen	98	65.171	Mesocricetus_auratus
ENSSHAG00000004960	SPEN	99	93.371	ENSMICG00000030994	SPEN	96	71.349	Microcebus_murinus
ENSSHAG00000004960	SPEN	99	63.235	ENSMMOG00000021742	si:ch1073-335m2.2	92	75.806	Mola_mola
ENSSHAG00000004960	SPEN	99	98.674	ENSMODG00000003411	SPEN	99	90.309	Monodelphis_domestica
ENSSHAG00000004960	SPEN	99	70.934	ENSMALG00000008625	-	67	48.715	Monopterus_albus
ENSSHAG00000004960	SPEN	99	92.803	MGP_CAROLIEiJ_G0026745	Spen	97	66.667	Mus_caroli
ENSSHAG00000004960	SPEN	90	93.555	ENSMPUG00000016317	SPEN	98	70.973	Mustela_putorius_furo
ENSSHAG00000004960	SPEN	100	93.271	ENSMLUG00000010144	SPEN	100	93.271	Myotis_lucifugus
ENSSHAG00000004960	SPEN	99	92.992	ENSNGAG00000000641	Spen	99	72.341	Nannospalax_galili
ENSSHAG00000004960	SPEN	90	81.287	ENSNBRG00000005733	si:ch1073-335m2.2	87	81.287	Neolamprologus_brichardi
ENSSHAG00000004960	SPEN	87	41.388	ENSNBRG00000022090	-	100	41.196	Neolamprologus_brichardi
ENSSHAG00000004960	SPEN	99	93.714	ENSNLEG00000007652	SPEN	97	71.327	Nomascus_leucogenys
ENSSHAG00000004960	SPEN	97	98.842	ENSMEUG00000002422	SPEN	91	98.958	Notamacropus_eugenii
ENSSHAG00000004960	SPEN	98	93.090	ENSOPRG00000015800	SPEN	91	79.106	Ochotona_princeps
ENSSHAG00000004960	SPEN	99	85.038	ENSODEG00000016644	SPEN	99	66.815	Octodon_degus
ENSSHAG00000004960	SPEN	99	79.167	ENSONIG00000006573	-	95	79.735	Oreochromis_niloticus
ENSSHAG00000004960	SPEN	98	94.073	ENSOANG00000004165	-	100	93.881	Ornithorhynchus_anatinus
ENSSHAG00000004960	SPEN	99	87.925	ENSOCUG00000010840	SPEN	97	66.839	Oryctolagus_cuniculus
ENSSHAG00000004960	SPEN	88	67.391	ENSORLG00000028894	-	70	67.391	Oryzias_latipes
ENSSHAG00000004960	SPEN	89	39.863	ENSORLG00020007735	-	100	39.619	Oryzias_latipes_hni
ENSSHAG00000004960	SPEN	99	71.553	ENSORLG00015022085	-	95	46.157	Oryzias_latipes_hsok
ENSSHAG00000004960	SPEN	99	67.784	ENSORLG00015005537	si:ch1073-335m2.2	83	44.159	Oryzias_latipes_hsok
ENSSHAG00000004960	SPEN	99	69.646	ENSOMEG00000004509	si:ch1073-335m2.2	74	68.493	Oryzias_melastigma
ENSSHAG00000004960	SPEN	99	71.553	ENSOMEG00000007639	-	95	47.136	Oryzias_melastigma
ENSSHAG00000004960	SPEN	99	93.182	ENSPANG00000006293	SPEN	96	69.710	Papio_anubis
ENSSHAG00000004960	SPEN	99	76.696	ENSPKIG00000002617	SPEN	83	77.200	Paramormyrops_kingsleyae
ENSSHAG00000004960	SPEN	99	74.697	ENSPKIG00000010492	si:ch1073-335m2.2	99	49.947	Paramormyrops_kingsleyae
ENSSHAG00000004960	SPEN	98	90.230	ENSPSIG00000008026	SPEN	100	74.489	Pelodiscus_sinensis
ENSSHAG00000004960	SPEN	98	92.898	ENSPEMG00000022997	Spen	97	66.929	Peromyscus_maniculatus_bairdii
ENSSHAG00000004960	SPEN	99	68.401	ENSPFOG00000017986	si:ch1073-335m2.2	94	72.277	Poecilia_formosa
ENSSHAG00000004960	SPEN	99	79.356	ENSPFOG00000024806	-	95	79.356	Poecilia_formosa
ENSSHAG00000004960	SPEN	99	68.401	ENSPLAG00000016625	si:ch1073-335m2.2	94	72.277	Poecilia_latipinna
ENSSHAG00000004960	SPEN	99	68.401	ENSPMEG00000002674	si:ch1073-335m2.2	94	72.277	Poecilia_mexicana
ENSSHAG00000004960	SPEN	99	70.415	ENSPMEG00000006764	-	83	69.636	Poecilia_mexicana
ENSSHAG00000004960	SPEN	99	68.030	ENSPREG00000005357	si:ch1073-335m2.2	90	81.065	Poecilia_reticulata
ENSSHAG00000004960	SPEN	99	70.415	ENSPREG00000010399	-	83	69.636	Poecilia_reticulata
ENSSHAG00000004960	SPEN	99	93.182	ENSPPYG00000001834	SPEN	72	71.466	Pongo_abelii
ENSSHAG00000004960	SPEN	79	90.952	ENSPCAG00000009543	SPEN	89	72.026	Procavia_capensis
ENSSHAG00000004960	SPEN	99	93.371	ENSPCOG00000021735	SPEN	97	69.510	Propithecus_coquereli
ENSSHAG00000004960	SPEN	99	93.371	ENSPVAG00000013794	SPEN	79	81.368	Pteropus_vampyrus
ENSSHAG00000004960	SPEN	90	81.287	ENSPNYG00000009042	si:ch1073-335m2.2	87	81.287	Pundamilia_nyererei
ENSSHAG00000004960	SPEN	99	68.166	ENSPNYG00000012379	-	99	45.423	Pundamilia_nyererei
ENSSHAG00000004960	SPEN	99	70.950	ENSPNAG00000011452	si:ch1073-335m2.2	92	76.437	Pygocentrus_nattereri
ENSSHAG00000004960	SPEN	97	81.267	ENSPNAG00000020795	spen	79	73.984	Pygocentrus_nattereri
ENSSHAG00000004960	SPEN	99	93.714	ENSRROG00000035686	SPEN	97	70.998	Rhinopithecus_roxellana
ENSSHAG00000004960	SPEN	99	93.905	ENSSBOG00000028770	SPEN	83	74.351	Saimiri_boliviensis_boliviensis
ENSSHAG00000004960	SPEN	88	64.815	ENSSFOG00015007131	si:ch1073-335m2.2	92	64.815	Scleropages_formosus
ENSSHAG00000004960	SPEN	96	83.060	ENSSFOG00015010267	si:ch1073-335m2.2	99	49.908	Scleropages_formosus
ENSSHAG00000004960	SPEN	99	69.331	ENSSMAG00000000125	si:ch1073-335m2.2	69	80.117	Scophthalmus_maximus
ENSSHAG00000004960	SPEN	98	79.890	ENSSMAG00000008996	-	93	48.398	Scophthalmus_maximus
ENSSHAG00000004960	SPEN	99	79.333	ENSSDUG00000003476	-	83	71.255	Seriola_dumerili
ENSSHAG00000004960	SPEN	99	69.274	ENSSDUG00000008416	si:ch1073-335m2.2	51	71.635	Seriola_dumerili
ENSSHAG00000004960	SPEN	98	79.339	ENSSLDG00000012950	-	83	71.255	Seriola_lalandi_dorsalis
ENSSHAG00000004960	SPEN	99	69.274	ENSSLDG00000023347	si:ch1073-335m2.2	69	72.115	Seriola_lalandi_dorsalis
ENSSHAG00000004960	SPEN	89	93.519	ENSSPUG00000001866	-	100	93.519	Sphenodon_punctatus
ENSSHAG00000004960	SPEN	98	79.614	ENSSPAG00000006014	-	83	70.850	Stegastes_partitus
ENSSHAG00000004960	SPEN	99	69.460	ENSSPAG00000012454	si:ch1073-335m2.2	54	80.117	Stegastes_partitus
ENSSHAG00000004960	SPEN	99	93.561	ENSSSCG00000034484	SPEN	97	71.156	Sus_scrofa
ENSSHAG00000004960	SPEN	99	70.537	ENSTRUG00000024350	-	99	45.305	Takifugu_rubripes
ENSSHAG00000004960	SPEN	99	75.947	ENSTNIG00000010907	-	55	75.949	Tetraodon_nigroviridis
ENSSHAG00000004960	SPEN	89	96.644	ENSTBEG00000003628	SPEN	72	96.644	Tupaia_belangeri
ENSSHAG00000004960	SPEN	98	93.474	ENSTTRG00000015704	SPEN	79	86.512	Tursiops_truncatus
ENSSHAG00000004960	SPEN	99	93.561	ENSUAMG00000009600	SPEN	97	71.141	Ursus_americanus
ENSSHAG00000004960	SPEN	99	93.939	ENSUMAG00000021641	SPEN	97	70.656	Ursus_maritimus
ENSSHAG00000004960	SPEN	99	93.561	ENSVVUG00000028951	SPEN	96	94.737	Vulpes_vulpes
ENSSHAG00000004960	SPEN	99	70.132	ENSXETG00000023114	SPEN	99	57.056	Xenopus_tropicalis
ENSSHAG00000004960	SPEN	83	79.882	ENSXCOG00000004516	si:ch1073-335m2.2	89	79.882	Xiphophorus_couchianus
ENSSHAG00000004960	SPEN	99	70.415	ENSXMAG00000021384	-	82	67.755	Xiphophorus_maculatus
ENSSHAG00000004960	SPEN	99	68.343	ENSXMAG00000029887	si:ch1073-335m2.2	92	71.287	Xiphophorus_maculatus