EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000005062 (Gene tree)
Gene ID: 100926689
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 28656 bases
Position: chrGL834447.1:137080-165735
Accession: 23505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005802	AARP2CN	PF08142.12	1.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000005856	BMS1-201	3927	-	ENSSHAP00000005802	1309 (aa)	-	G3VRJ7

Gene Model

Click here to download ENSSHAG00000005062's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005062	BMS1	99	78.298	ENSG00000165733	BMS1	99	78.067	Homo_sapiens
ENSSHAG00000005062	BMS1	69	72.414	ENSAPOG00000002296	bms1	99	64.148	Acanthochromis_polyacanthus
ENSSHAG00000005062	BMS1	99	77.982	ENSAMEG00000016834	BMS1	99	78.211	Ailuropoda_melanoleuca
ENSSHAG00000005062	BMS1	87	69.144	ENSACIG00000002588	bms1	90	77.805	Amphilophus_citrinellus
ENSSHAG00000005062	BMS1	82	69.362	ENSAOCG00000018088	bms1	55	63.918	Amphiprion_ocellaris
ENSSHAG00000005062	BMS1	80	71.106	ENSAPEG00000014673	bms1	53	63.456	Amphiprion_percula
ENSSHAG00000005062	BMS1	88	67.416	ENSATEG00000023465	bms1	99	64.688	Anabas_testudineus
ENSSHAG00000005062	BMS1	95	71.975	ENSAPLG00000003759	BMS1	100	72.367	Anas_platyrhynchos
ENSSHAG00000005062	BMS1	99	71.126	ENSACAG00000004537	-	99	71.061	Anolis_carolinensis
ENSSHAG00000005062	BMS1	99	77.854	ENSANAG00000023432	BMS1	99	77.377	Aotus_nancymaae
ENSSHAG00000005062	BMS1	88	67.886	ENSACLG00000001294	bms1	99	64.955	Astatotilapia_calliptera
ENSSHAG00000005062	BMS1	87	66.506	ENSAMXG00000011236	bms1	51	64.571	Astyanax_mexicanus
ENSSHAG00000005062	BMS1	99	78.067	ENSBTAG00000012878	BMS1	99	78.528	Bos_taurus
ENSSHAG00000005062	BMS1	78	51.961	WBGene00022021	Y61A9LA.10	98	51.961	Caenorhabditis_elegans
ENSSHAG00000005062	BMS1	99	78.144	ENSCJAG00000021705	BMS1	99	77.761	Callithrix_jacchus
ENSSHAG00000005062	BMS1	99	77.607	ENSCAFG00000007114	BMS1	99	78.127	Canis_familiaris
ENSSHAG00000005062	BMS1	99	77.607	ENSCAFG00020025282	BMS1	99	78.127	Canis_lupus_dingo
ENSSHAG00000005062	BMS1	99	78.528	ENSCHIG00000023251	BMS1	99	78.834	Capra_hircus
ENSSHAG00000005062	BMS1	99	72.437	ENSCAPG00000008652	BMS1	100	72.193	Cavia_aperea
ENSSHAG00000005062	BMS1	99	76.180	ENSCPOG00000000502	BMS1	100	75.936	Cavia_porcellus
ENSSHAG00000005062	BMS1	99	64.981	ENSCCAG00000024969	-	99	63.908	Cebus_capucinus
ENSSHAG00000005062	BMS1	99	78.911	ENSCATG00000030625	-	99	78.451	Cercocebus_atys
ENSSHAG00000005062	BMS1	90	57.957	ENSCATG00000008695	-	97	57.545	Cercocebus_atys
ENSSHAG00000005062	BMS1	99	77.346	ENSCLAG00000002446	BMS1	100	77.269	Chinchilla_lanigera
ENSSHAG00000005062	BMS1	99	78.451	ENSCSAG00000011118	BMS1	99	78.221	Chlorocebus_sabaeus
ENSSHAG00000005062	BMS1	99	77.206	ENSCHOG00000011055	BMS1	99	77.573	Choloepus_hoffmanni
ENSSHAG00000005062	BMS1	99	75.643	ENSCPBG00000025581	BMS1	99	74.470	Chrysemys_picta_bellii
ENSSHAG00000005062	BMS1	77	59.611	ENSCING00000003181	-	99	59.611	Ciona_intestinalis
ENSSHAG00000005062	BMS1	50	68.421	ENSCSAVG00000004113	-	89	54.206	Ciona_savignyi
ENSSHAG00000005062	BMS1	99	78.834	ENSCANG00000011609	BMS1	99	78.067	Colobus_angolensis_palliatus
ENSSHAG00000005062	BMS1	99	76.525	ENSCGRG00001019461	Bms1	100	76.300	Cricetulus_griseus_chok1gshd
ENSSHAG00000005062	BMS1	99	76.525	ENSCGRG00000009016	Bms1	99	76.300	Cricetulus_griseus_crigri
ENSSHAG00000005062	BMS1	80	74.239	ENSCSEG00000002469	bms1	99	59.478	Cynoglossus_semilaevis
ENSSHAG00000005062	BMS1	78	76.627	ENSCVAG00000008371	bms1	99	65.746	Cyprinodon_variegatus
ENSSHAG00000005062	BMS1	60	55.875	ENSDARG00000054154	bms1	99	58.939	Danio_rerio
ENSSHAG00000005062	BMS1	99	79.064	ENSDNOG00000015761	BMS1	99	78.528	Dasypus_novemcinctus
ENSSHAG00000005062	BMS1	99	76.787	ENSDORG00000002982	Bms1	99	77.395	Dipodomys_ordii
ENSSHAG00000005062	BMS1	74	60.322	FBgn0036686	CG7728	88	58.191	Drosophila_melanogaster
ENSSHAG00000005062	BMS1	85	80.357	ENSETEG00000009554	BMS1	91	80.357	Echinops_telfairi
ENSSHAG00000005062	BMS1	99	78.264	ENSEASG00005006894	BMS1	99	78.972	Equus_asinus_asinus
ENSSHAG00000005062	BMS1	99	78.588	ENSECAG00000001358	BMS1	99	78.818	Equus_caballus
ENSSHAG00000005062	BMS1	83	74.324	ENSELUG00000001756	bms1	98	64.103	Esox_lucius
ENSSHAG00000005062	BMS1	99	78.517	ENSFCAG00000011220	BMS1	99	78.457	Felis_catus
ENSSHAG00000005062	BMS1	99	72.109	ENSFALG00000006882	BMS1	99	71.847	Ficedula_albicollis
ENSSHAG00000005062	BMS1	99	75.381	ENSFDAG00000001422	BMS1	100	75.248	Fukomys_damarensis
ENSSHAG00000005062	BMS1	85	69.206	ENSFHEG00000003367	bms1	99	64.804	Fundulus_heteroclitus
ENSSHAG00000005062	BMS1	89	64.172	ENSGMOG00000000718	bms1	88	75.184	Gadus_morhua
ENSSHAG00000005062	BMS1	61	68.927	ENSGALG00000002624	BMS1	99	72.762	Gallus_gallus
ENSSHAG00000005062	BMS1	99	59.893	ENSGACG00000015334	bms1	89	64.904	Gasterosteus_aculeatus
ENSSHAG00000005062	BMS1	99	73.893	ENSGAGG00000003467	BMS1	99	73.130	Gopherus_agassizii
ENSSHAG00000005062	BMS1	87	68.153	ENSHBUG00000022628	bms1	99	64.253	Haplochromis_burtoni
ENSSHAG00000005062	BMS1	99	75.630	ENSHGLG00000000477	BMS1	100	74.563	Heterocephalus_glaber_female
ENSSHAG00000005062	BMS1	99	75.707	ENSHGLG00100002176	BMS1	100	74.639	Heterocephalus_glaber_male
ENSSHAG00000005062	BMS1	88	66.129	ENSHCOG00000017604	bms1	99	64.351	Hippocampus_comes
ENSSHAG00000005062	BMS1	84	73.423	ENSIPUG00000017855	bms1	99	60.467	Ictalurus_punctatus
ENSSHAG00000005062	BMS1	99	77.761	ENSSTOG00000015063	BMS1	99	78.528	Ictidomys_tridecemlineatus
ENSSHAG00000005062	BMS1	99	76.782	ENSJJAG00000017328	Bms1	100	76.628	Jaculus_jaculus
ENSSHAG00000005062	BMS1	57	65.201	ENSKMAG00000021982	bms1	91	64.534	Kryptolebias_marmoratus
ENSSHAG00000005062	BMS1	80	72.018	ENSLBEG00000028208	bms1	99	64.392	Labrus_bergylta
ENSSHAG00000005062	BMS1	99	61.955	ENSLACG00000001600	BMS1	100	62.030	Latimeria_chalumnae
ENSSHAG00000005062	BMS1	82	75.278	ENSLOCG00000012914	bms1	99	61.930	Lepisosteus_oculatus
ENSSHAG00000005062	BMS1	99	77.206	ENSLAFG00000006250	BMS1	99	77.035	Loxodonta_africana
ENSSHAG00000005062	BMS1	81	82.830	ENSMFAG00000037771	BMS1	98	82.103	Macaca_fascicularis
ENSSHAG00000005062	BMS1	90	66.133	ENSMMUG00000007426	-	99	65.375	Macaca_mulatta
ENSSHAG00000005062	BMS1	85	60.791	ENSMLEG00000029084	-	97	60.432	Mandrillus_leucophaeus
ENSSHAG00000005062	BMS1	93	66.720	ENSMAMG00000020855	bms1	99	62.707	Mastacembelus_armatus
ENSSHAG00000005062	BMS1	88	67.829	ENSMZEG00005005663	bms1	99	65.356	Maylandia_zebra
ENSSHAG00000005062	BMS1	95	70.980	ENSMGAG00000001170	BMS1	99	70.929	Meleagris_gallopavo
ENSSHAG00000005062	BMS1	99	77.066	ENSMAUG00000002195	Bms1	100	76.817	Mesocricetus_auratus
ENSSHAG00000005062	BMS1	99	77.625	ENSMICG00000009977	BMS1	99	77.088	Microcebus_murinus
ENSSHAG00000005062	BMS1	99	75.019	ENSMOCG00000002038	Bms1	99	75.268	Microtus_ochrogaster
ENSSHAG00000005062	BMS1	85	67.261	ENSMMOG00000000977	bms1	99	64.428	Mola_mola
ENSSHAG00000005062	BMS1	99	89.810	ENSMODG00000001177	BMS1	99	90.502	Monodelphis_domestica
ENSSHAG00000005062	BMS1	96	64.769	ENSMALG00000009680	bms1	99	64.481	Monopterus_albus
ENSSHAG00000005062	BMS1	69	90.073	MGP_CAROLIEiJ_G0028785	-	85	90.073	Mus_caroli
ENSSHAG00000005062	BMS1	99	75.576	ENSMUSG00000030138	Bms1	99	75.498	Mus_musculus
ENSSHAG00000005062	BMS1	99	75.362	MGP_PahariEiJ_G0022539	Bms1	99	75.346	Mus_pahari
ENSSHAG00000005062	BMS1	99	75.133	MGP_SPRETEiJ_G0029816	Bms1	99	75.229	Mus_spretus
ENSSHAG00000005062	BMS1	99	78.939	ENSMPUG00000017276	BMS1	99	78.418	Mustela_putorius_furo
ENSSHAG00000005062	BMS1	99	76.853	ENSMLUG00000003260	BMS1	99	76.764	Myotis_lucifugus
ENSSHAG00000005062	BMS1	91	71.671	ENSNGAG00000015258	Bms1	99	71.970	Nannospalax_galili
ENSSHAG00000005062	BMS1	99	76.610	ENSNLEG00000015791	BMS1	99	76.396	Nomascus_leucogenys
ENSSHAG00000005062	BMS1	79	89.549	ENSOPRG00000005195	BMS1	81	89.549	Ochotona_princeps
ENSSHAG00000005062	BMS1	99	76.070	ENSODEG00000005554	BMS1	100	76.529	Octodon_degus
ENSSHAG00000005062	BMS1	89	68.810	ENSONIG00000007227	bms1	99	64.632	Oreochromis_niloticus
ENSSHAG00000005062	BMS1	99	78.604	ENSOANG00000000662	-	99	79.064	Ornithorhynchus_anatinus
ENSSHAG00000005062	BMS1	99	76.970	ENSOCUG00000005354	BMS1	99	77.200	Oryctolagus_cuniculus
ENSSHAG00000005062	BMS1	81	73.767	ENSORLG00000014655	bms1	99	64.036	Oryzias_latipes
ENSSHAG00000005062	BMS1	80	73.973	ENSORLG00020016246	bms1	93	67.370	Oryzias_latipes_hni
ENSSHAG00000005062	BMS1	81	73.274	ENSORLG00015014183	bms1	99	63.636	Oryzias_latipes_hsok
ENSSHAG00000005062	BMS1	80	74.773	ENSOMEG00000015042	bms1	98	66.543	Oryzias_melastigma
ENSSHAG00000005062	BMS1	99	78.194	ENSOGAG00000006511	BMS1	99	78.118	Otolemur_garnettii
ENSSHAG00000005062	BMS1	99	78.058	ENSOARG00000003900	BMS1	99	78.457	Ovis_aries
ENSSHAG00000005062	BMS1	99	74.636	ENSPPAG00000027837	BMS1	99	74.483	Pan_paniscus
ENSSHAG00000005062	BMS1	99	78.610	ENSPPRG00000001311	BMS1	99	78.380	Panthera_pardus
ENSSHAG00000005062	BMS1	99	77.082	ENSPTIG00000009652	BMS1	99	76.929	Panthera_tigris_altaica
ENSSHAG00000005062	BMS1	99	78.374	ENSPTRG00000002441	BMS1	99	77.991	Pan_troglodytes
ENSSHAG00000005062	BMS1	99	72.844	ENSPSIG00000006481	BMS1	99	72.946	Pelodiscus_sinensis
ENSSHAG00000005062	BMS1	98	69.636	ENSPEMG00000022467	Bms1	100	68.835	Peromyscus_maniculatus_bairdii
ENSSHAG00000005062	BMS1	95	99.329	ENSPCIG00000001339	BMS1	99	96.639	Phascolarctos_cinereus
ENSSHAG00000005062	BMS1	78	74.201	ENSPFOG00000015180	bms1	99	63.636	Poecilia_formosa
ENSSHAG00000005062	BMS1	78	74.447	ENSPMEG00000023176	bms1	93	64.739	Poecilia_mexicana
ENSSHAG00000005062	BMS1	78	72.927	ENSPREG00000002695	bms1	98	64.404	Poecilia_reticulata
ENSSHAG00000005062	BMS1	61	75.404	ENSPPYG00000002836	-	99	75.373	Pongo_abelii
ENSSHAG00000005062	BMS1	72	90.476	ENSPCAG00000014528	BMS1	66	90.476	Procavia_capensis
ENSSHAG00000005062	BMS1	95	75.639	ENSPCOG00000023834	-	99	75.000	Propithecus_coquereli
ENSSHAG00000005062	BMS1	99	75.346	ENSPVAG00000000725	BMS1	99	74.808	Pteropus_vampyrus
ENSSHAG00000005062	BMS1	87	68.982	ENSPNYG00000018866	bms1	89	63.914	Pundamilia_nyererei
ENSSHAG00000005062	BMS1	82	75.421	ENSRNOG00000006576	Bms1	100	74.766	Rattus_norvegicus
ENSSHAG00000005062	BMS1	99	76.610	ENSRROG00000040101	BMS1	99	76.630	Rhinopithecus_roxellana
ENSSHAG00000005062	BMS1	70	51.276	YPL217C	-	73	51.980	Saccharomyces_cerevisiae
ENSSHAG00000005062	BMS1	99	78.681	ENSSBOG00000035778	BMS1	99	78.067	Saimiri_boliviensis_boliviensis
ENSSHAG00000005062	BMS1	89	67.624	ENSSFOG00015022313	bms1	99	61.441	Scleropages_formosus
ENSSHAG00000005062	BMS1	80	72.769	ENSSMAG00000019966	bms1	99	64.685	Scophthalmus_maximus
ENSSHAG00000005062	BMS1	87	68.932	ENSSDUG00000016875	bms1	99	66.421	Seriola_dumerili
ENSSHAG00000005062	BMS1	87	69.256	ENSSLDG00000015199	bms1	99	65.468	Seriola_lalandi_dorsalis
ENSSHAG00000005062	BMS1	70	66.126	ENSSARG00000014407	BMS1	100	66.884	Sorex_araneus
ENSSHAG00000005062	BMS1	99	72.427	ENSSPUG00000014454	BMS1	99	72.385	Sphenodon_punctatus
ENSSHAG00000005062	BMS1	99	78.484	ENSSSCG00000010198	BMS1	99	79.556	Sus_scrofa
ENSSHAG00000005062	BMS1	99	72.006	ENSTGUG00000006302	-	99	71.807	Taeniopygia_guttata
ENSSHAG00000005062	BMS1	86	63.872	ENSTRUG00000008028	bms1	98	63.158	Takifugu_rubripes
ENSSHAG00000005062	BMS1	59	83.333	ENSTBEG00000001673	-	63	83.219	Tupaia_belangeri
ENSSHAG00000005062	BMS1	99	78.418	ENSUAMG00000023996	BMS1	99	78.341	Ursus_americanus
ENSSHAG00000005062	BMS1	99	78.341	ENSUMAG00000016523	BMS1	99	78.264	Ursus_maritimus
ENSSHAG00000005062	BMS1	83	90.592	ENSVPAG00000007477	BMS1	92	87.982	Vicugna_pacos
ENSSHAG00000005062	BMS1	99	77.607	ENSVVUG00000021305	BMS1	99	78.127	Vulpes_vulpes
ENSSHAG00000005062	BMS1	98	64.087	ENSXETG00000008158	bms1	98	76.835	Xenopus_tropicalis
ENSSHAG00000005062	BMS1	80	71.759	ENSXCOG00000000506	bms1	94	77.307	Xiphophorus_couchianus
ENSSHAG00000005062	BMS1	80	71.429	ENSXMAG00000014236	bms1	99	63.873	Xiphophorus_maculatus