EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000005213 (Gene tree)
Gene ID: 100913690
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 24379 bases
Position: chrGL856980.1:144370-168748
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000005983	TRM13	PF05206.14	2.4e-91	1	1
ENSSHAP00000005983	zf-U11-48K	PF05253.12	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006037	TRMT13-201	1460	-	ENSSHAP00000005983	450 (aa)	-	G3VS28

Gene Model

Click here to download ENSSHAG00000005213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005213	TRMT13	97	77.574	ENSG00000122435	TRMT13	91	77.574	Homo_sapiens
ENSSHAG00000005213	TRMT13	94	49.024	ENSAPOG00000015131	trmt13	92	49.241	Acanthochromis_polyacanthus
ENSSHAG00000005213	TRMT13	97	77.346	ENSAMEG00000008917	TRMT13	91	77.346	Ailuropoda_melanoleuca
ENSSHAG00000005213	TRMT13	95	52.381	ENSACIG00000005804	trmt13	90	50.667	Amphilophus_citrinellus
ENSSHAG00000005213	TRMT13	94	48.180	ENSAOCG00000023585	trmt13	92	48.180	Amphiprion_ocellaris
ENSSHAG00000005213	TRMT13	94	48.608	ENSAPEG00000004025	trmt13	92	48.608	Amphiprion_percula
ENSSHAG00000005213	TRMT13	96	52.928	ENSATEG00000006597	trmt13	90	52.928	Anabas_testudineus
ENSSHAG00000005213	TRMT13	95	69.213	ENSAPLG00000014924	TRMT13	99	69.213	Anas_platyrhynchos
ENSSHAG00000005213	TRMT13	96	65.438	ENSACAG00000003498	TRMT13	92	65.438	Anolis_carolinensis
ENSSHAG00000005213	TRMT13	97	76.888	ENSANAG00000019525	TRMT13	91	76.888	Aotus_nancymaae
ENSSHAG00000005213	TRMT13	97	53.394	ENSACLG00000020018	trmt13	92	53.394	Astatotilapia_calliptera
ENSSHAG00000005213	TRMT13	96	53.061	ENSAMXG00000017963	trmt13	92	54.072	Astyanax_mexicanus
ENSSHAG00000005213	TRMT13	97	78.032	ENSBTAG00000015781	TRMT13	91	78.032	Bos_taurus
ENSSHAG00000005213	TRMT13	97	75.515	ENSCJAG00000000200	TRMT13	90	84.962	Callithrix_jacchus
ENSSHAG00000005213	TRMT13	70	74.522	ENSCAFG00000020021	TRMT13	99	74.522	Canis_familiaris
ENSSHAG00000005213	TRMT13	51	85.526	ENSCAFG00020011572	TRMT13	80	84.783	Canis_lupus_dingo
ENSSHAG00000005213	TRMT13	97	78.490	ENSCHIG00000015395	TRMT13	91	78.490	Capra_hircus
ENSSHAG00000005213	TRMT13	95	71.495	ENSTSYG00000010811	TRMT13	92	70.938	Carlito_syrichta
ENSSHAG00000005213	TRMT13	80	57.851	ENSCAPG00000009085	TRMT13	100	58.402	Cavia_aperea
ENSSHAG00000005213	TRMT13	97	76.659	ENSCPOG00000000694	TRMT13	91	76.659	Cavia_porcellus
ENSSHAG00000005213	TRMT13	97	76.888	ENSCCAG00000023772	TRMT13	91	76.888	Cebus_capucinus
ENSSHAG00000005213	TRMT13	97	76.888	ENSCATG00000033556	TRMT13	91	76.888	Cercocebus_atys
ENSSHAG00000005213	TRMT13	95	72.834	ENSCLAG00000008220	TRMT13	100	73.068	Chinchilla_lanigera
ENSSHAG00000005213	TRMT13	97	77.346	ENSCSAG00000001506	TRMT13	91	77.346	Chlorocebus_sabaeus
ENSSHAG00000005213	TRMT13	96	72.517	ENSCPBG00000026671	TRMT13	90	72.517	Chrysemys_picta_bellii
ENSSHAG00000005213	TRMT13	97	77.117	ENSCANG00000034659	TRMT13	91	77.117	Colobus_angolensis_palliatus
ENSSHAG00000005213	TRMT13	97	74.771	ENSCGRG00001021601	Trmt13	90	74.771	Cricetulus_griseus_chok1gshd
ENSSHAG00000005213	TRMT13	57	70.039	ENSCGRG00000000093	-	99	70.039	Cricetulus_griseus_crigri
ENSSHAG00000005213	TRMT13	93	50.358	ENSCSEG00000000591	trmt13	88	50.358	Cynoglossus_semilaevis
ENSSHAG00000005213	TRMT13	95	50.336	ENSCVAG00000017342	trmt13	87	50.559	Cyprinodon_variegatus
ENSSHAG00000005213	TRMT13	96	57.506	ENSDARG00000102846	trmt13	90	57.506	Danio_rerio
ENSSHAG00000005213	TRMT13	50	84.141	ENSDNOG00000001710	TRMT13	69	84.141	Dasypus_novemcinctus
ENSSHAG00000005213	TRMT13	97	74.312	ENSDORG00000015808	Trmt13	90	74.312	Dipodomys_ordii
ENSSHAG00000005213	TRMT13	94	30.805	FBgn0037435	CG18048	84	30.805	Drosophila_melanogaster
ENSSHAG00000005213	TRMT13	95	64.953	ENSETEG00000005819	TRMT13	89	64.953	Echinops_telfairi
ENSSHAG00000005213	TRMT13	95	47.086	ENSEBUG00000014444	trmt13	94	44.872	Eptatretus_burgeri
ENSSHAG00000005213	TRMT13	97	78.719	ENSEASG00005015918	TRMT13	91	78.719	Equus_asinus_asinus
ENSSHAG00000005213	TRMT13	97	78.490	ENSECAG00000022626	TRMT13	91	78.490	Equus_caballus
ENSSHAG00000005213	TRMT13	75	71.875	ENSEEUG00000000294	TRMT13	71	71.875	Erinaceus_europaeus
ENSSHAG00000005213	TRMT13	96	53.881	ENSELUG00000003803	trmt13	91	54.214	Esox_lucius
ENSSHAG00000005213	TRMT13	97	77.574	ENSFCAG00000030618	TRMT13	91	77.574	Felis_catus
ENSSHAG00000005213	TRMT13	97	67.882	ENSFALG00000002424	TRMT13	91	67.882	Ficedula_albicollis
ENSSHAG00000005213	TRMT13	96	77.315	ENSFDAG00000006342	TRMT13	89	77.315	Fukomys_damarensis
ENSSHAG00000005213	TRMT13	74	53.488	ENSFHEG00000022954	trmt13	89	51.366	Fundulus_heteroclitus
ENSSHAG00000005213	TRMT13	96	47.674	ENSGMOG00000013223	trmt13	94	47.465	Gadus_morhua
ENSSHAG00000005213	TRMT13	95	68.618	ENSGALG00000005290	TRMT13	89	69.267	Gallus_gallus
ENSSHAG00000005213	TRMT13	73	52.059	ENSGAFG00000001577	trmt13	74	52.059	Gambusia_affinis
ENSSHAG00000005213	TRMT13	95	50.577	ENSGACG00000013428	trmt13	90	51.501	Gasterosteus_aculeatus
ENSSHAG00000005213	TRMT13	96	72.811	ENSGAGG00000023303	TRMT13	90	72.811	Gopherus_agassizii
ENSSHAG00000005213	TRMT13	97	77.346	ENSGGOG00000005616	TRMT13	91	77.346	Gorilla_gorilla
ENSSHAG00000005213	TRMT13	97	53.620	ENSHBUG00000007754	trmt13	92	53.620	Haplochromis_burtoni
ENSSHAG00000005213	TRMT13	96	78.009	ENSHGLG00000002164	TRMT13	89	78.009	Heterocephalus_glaber_female
ENSSHAG00000005213	TRMT13	96	78.009	ENSHGLG00100001618	TRMT13	89	78.009	Heterocephalus_glaber_male
ENSSHAG00000005213	TRMT13	93	47.529	ENSHCOG00000020553	trmt13	88	47.529	Hippocampus_comes
ENSSHAG00000005213	TRMT13	94	57.176	ENSIPUG00000024787	trmt13	91	57.845	Ictalurus_punctatus
ENSSHAG00000005213	TRMT13	97	77.574	ENSSTOG00000013483	TRMT13	91	77.574	Ictidomys_tridecemlineatus
ENSSHAG00000005213	TRMT13	97	73.624	ENSJJAG00000018012	Trmt13	91	73.624	Jaculus_jaculus
ENSSHAG00000005213	TRMT13	68	50.658	ENSKMAG00000007639	trmt13	92	50.658	Kryptolebias_marmoratus
ENSSHAG00000005213	TRMT13	95	49.438	ENSLBEG00000020238	trmt13	92	49.666	Labrus_bergylta
ENSSHAG00000005213	TRMT13	95	64.884	ENSLACG00000013153	TRMT13	100	63.433	Latimeria_chalumnae
ENSSHAG00000005213	TRMT13	96	58.372	ENSLOCG00000000418	trmt13	91	58.372	Lepisosteus_oculatus
ENSSHAG00000005213	TRMT13	82	76.216	ENSLAFG00000002383	TRMT13	100	76.216	Loxodonta_africana
ENSSHAG00000005213	TRMT13	97	77.117	ENSMFAG00000034681	TRMT13	91	77.117	Macaca_fascicularis
ENSSHAG00000005213	TRMT13	97	77.117	ENSMMUG00000004243	TRMT13	91	77.117	Macaca_mulatta
ENSSHAG00000005213	TRMT13	97	77.117	ENSMNEG00000036102	TRMT13	91	77.117	Macaca_nemestrina
ENSSHAG00000005213	TRMT13	97	77.117	ENSMLEG00000034258	TRMT13	91	77.117	Mandrillus_leucophaeus
ENSSHAG00000005213	TRMT13	98	50.111	ENSMAMG00000016597	trmt13	93	50.111	Mastacembelus_armatus
ENSSHAG00000005213	TRMT13	97	53.167	ENSMZEG00005020959	trmt13	92	53.167	Maylandia_zebra
ENSSHAG00000005213	TRMT13	95	69.087	ENSMGAG00000006970	TRMT13	100	69.087	Meleagris_gallopavo
ENSSHAG00000005213	TRMT13	97	75.000	ENSMAUG00000010448	Trmt13	90	75.000	Mesocricetus_auratus
ENSSHAG00000005213	TRMT13	97	77.346	ENSMICG00000005283	TRMT13	91	77.346	Microcebus_murinus
ENSSHAG00000005213	TRMT13	97	71.101	ENSMOCG00000019914	Trmt13	91	71.101	Microtus_ochrogaster
ENSSHAG00000005213	TRMT13	96	90.092	ENSMODG00000003646	TRMT13	89	90.092	Monodelphis_domestica
ENSSHAG00000005213	TRMT13	96	51.740	ENSMALG00000020965	trmt13	90	51.740	Monopterus_albus
ENSSHAG00000005213	TRMT13	95	75.701	MGP_CAROLIEiJ_G0025568	Trmt13	94	82.143	Mus_caroli
ENSSHAG00000005213	TRMT13	95	75.758	ENSMUSG00000033439	Trmt13	94	83.333	Mus_musculus
ENSSHAG00000005213	TRMT13	95	75.758	MGP_PahariEiJ_G0027014	Trmt13	93	83.133	Mus_pahari
ENSSHAG00000005213	TRMT13	95	75.524	MGP_SPRETEiJ_G0026518	Trmt13	94	83.333	Mus_spretus
ENSSHAG00000005213	TRMT13	85	74.541	ENSMPUG00000002078	-	100	74.541	Mustela_putorius_furo
ENSSHAG00000005213	TRMT13	97	70.252	ENSMLUG00000002124	TRMT13	91	70.252	Myotis_lucifugus
ENSSHAG00000005213	TRMT13	97	49.324	ENSNBRG00000006783	trmt13	91	49.324	Neolamprologus_brichardi
ENSSHAG00000005213	TRMT13	97	76.888	ENSNLEG00000035917	TRMT13	91	76.888	Nomascus_leucogenys
ENSSHAG00000005213	TRMT13	61	82.895	ENSOPRG00000012048	TRMT13	57	82.895	Ochotona_princeps
ENSSHAG00000005213	TRMT13	97	52.941	ENSONIG00000004574	trmt13	92	52.941	Oreochromis_niloticus
ENSSHAG00000005213	TRMT13	95	72.727	ENSOANG00000012057	TRMT13	99	72.727	Ornithorhynchus_anatinus
ENSSHAG00000005213	TRMT13	97	76.659	ENSOCUG00000023095	TRMT13	91	76.659	Oryctolagus_cuniculus
ENSSHAG00000005213	TRMT13	91	49.286	ENSORLG00000003320	trmt13	89	49.286	Oryzias_latipes
ENSSHAG00000005213	TRMT13	90	49.153	ENSORLG00020005972	trmt13	88	48.951	Oryzias_latipes_hni
ENSSHAG00000005213	TRMT13	97	50.787	ENSORLG00015002270	trmt13	93	50.787	Oryzias_latipes_hsok
ENSSHAG00000005213	TRMT13	97	50.901	ENSOMEG00000006724	trmt13	91	50.591	Oryzias_melastigma
ENSSHAG00000005213	TRMT13	95	77.283	ENSOGAG00000005618	TRMT13	88	76.201	Otolemur_garnettii
ENSSHAG00000005213	TRMT13	97	78.490	ENSOARG00000017983	TRMT13	91	78.490	Ovis_aries
ENSSHAG00000005213	TRMT13	97	77.574	ENSPPAG00000043736	TRMT13	91	77.574	Pan_paniscus
ENSSHAG00000005213	TRMT13	97	77.574	ENSPPRG00000003424	TRMT13	91	77.574	Panthera_pardus
ENSSHAG00000005213	TRMT13	97	77.574	ENSPTIG00000018598	TRMT13	91	77.574	Panthera_tigris_altaica
ENSSHAG00000005213	TRMT13	97	77.346	ENSPTRG00000001001	TRMT13	91	77.346	Pan_troglodytes
ENSSHAG00000005213	TRMT13	97	77.117	ENSPANG00000007598	TRMT13	91	77.117	Papio_anubis
ENSSHAG00000005213	TRMT13	97	55.275	ENSPKIG00000001514	trmt13	92	55.275	Paramormyrops_kingsleyae
ENSSHAG00000005213	TRMT13	89	70.250	ENSPSIG00000012703	TRMT13	96	70.250	Pelodiscus_sinensis
ENSSHAG00000005213	TRMT13	97	51.693	ENSPMGG00000013298	trmt13	88	51.693	Periophthalmus_magnuspinnatus
ENSSHAG00000005213	TRMT13	97	72.936	ENSPEMG00000000275	Trmt13	91	72.936	Peromyscus_maniculatus_bairdii
ENSSHAG00000005213	TRMT13	93	46.667	ENSPMAG00000000823	trmt13	88	46.667	Petromyzon_marinus
ENSSHAG00000005213	TRMT13	96	92.326	ENSPCIG00000007699	TRMT13	90	92.166	Phascolarctos_cinereus
ENSSHAG00000005213	TRMT13	97	48.741	ENSPFOG00000008675	trmt13	90	48.741	Poecilia_formosa
ENSSHAG00000005213	TRMT13	95	48.741	ENSPLAG00000009709	trmt13	92	48.741	Poecilia_latipinna
ENSSHAG00000005213	TRMT13	95	48.741	ENSPMEG00000022954	trmt13	92	48.741	Poecilia_mexicana
ENSSHAG00000005213	TRMT13	73	52.941	ENSPREG00000005645	trmt13	79	53.086	Poecilia_reticulata
ENSSHAG00000005213	TRMT13	97	77.117	ENSPPYG00000001120	TRMT13	91	77.117	Pongo_abelii
ENSSHAG00000005213	TRMT13	97	75.862	ENSPCAG00000002340	TRMT13	90	75.862	Procavia_capensis
ENSSHAG00000005213	TRMT13	97	77.346	ENSPCOG00000017984	TRMT13	91	77.346	Propithecus_coquereli
ENSSHAG00000005213	TRMT13	97	78.490	ENSPVAG00000017430	TRMT13	91	78.490	Pteropus_vampyrus
ENSSHAG00000005213	TRMT13	97	50.905	ENSPNYG00000013690	trmt13	92	50.905	Pundamilia_nyererei
ENSSHAG00000005213	TRMT13	96	55.787	ENSPNAG00000022130	trmt13	92	55.787	Pygocentrus_nattereri
ENSSHAG00000005213	TRMT13	95	75.291	ENSRNOG00000015140	Trmt13	86	75.291	Rattus_norvegicus
ENSSHAG00000005213	TRMT13	97	77.117	ENSRBIG00000037686	TRMT13	91	77.117	Rhinopithecus_bieti
ENSSHAG00000005213	TRMT13	97	77.117	ENSRROG00000044057	TRMT13	91	77.117	Rhinopithecus_roxellana
ENSSHAG00000005213	TRMT13	97	76.659	ENSSBOG00000026541	TRMT13	91	76.659	Saimiri_boliviensis_boliviensis
ENSSHAG00000005213	TRMT13	95	53.118	ENSSFOG00015017560	trmt13	90	53.505	Scleropages_formosus
ENSSHAG00000005213	TRMT13	95	51.364	ENSSMAG00000014592	trmt13	95	50.701	Scophthalmus_maximus
ENSSHAG00000005213	TRMT13	94	50.905	ENSSDUG00000015508	trmt13	90	50.554	Seriola_dumerili
ENSSHAG00000005213	TRMT13	96	50.333	ENSSLDG00000019060	trmt13	90	50.333	Seriola_lalandi_dorsalis
ENSSHAG00000005213	TRMT13	96	67.972	ENSSARG00000010344	TRMT13	91	67.972	Sorex_araneus
ENSSHAG00000005213	TRMT13	96	68.750	ENSSPUG00000016339	TRMT13	94	68.750	Sphenodon_punctatus
ENSSHAG00000005213	TRMT13	94	51.264	ENSSPAG00000011922	trmt13	91	51.136	Stegastes_partitus
ENSSHAG00000005213	TRMT13	97	78.490	ENSSSCG00000006869	TRMT13	91	78.490	Sus_scrofa
ENSSHAG00000005213	TRMT13	96	68.506	ENSTGUG00000005253	TRMT13	93	68.506	Taeniopygia_guttata
ENSSHAG00000005213	TRMT13	94	49.885	ENSTRUG00000008400	trmt13	91	49.654	Takifugu_rubripes
ENSSHAG00000005213	TRMT13	92	62.019	ENSTBEG00000008911	TRMT13	100	62.019	Tupaia_belangeri
ENSSHAG00000005213	TRMT13	97	72.998	ENSUAMG00000017251	TRMT13	91	72.998	Ursus_americanus
ENSSHAG00000005213	TRMT13	97	77.346	ENSUMAG00000007901	TRMT13	99	78.009	Ursus_maritimus
ENSSHAG00000005213	TRMT13	96	62.037	ENSVPAG00000001034	TRMT13	100	62.037	Vicugna_pacos
ENSSHAG00000005213	TRMT13	97	77.294	ENSVVUG00000021996	TRMT13	90	77.294	Vulpes_vulpes
ENSSHAG00000005213	TRMT13	94	56.876	ENSXETG00000013204	trmt13	89	56.876	Xenopus_tropicalis
ENSSHAG00000005213	TRMT13	95	48.630	ENSXMAG00000010765	trmt13	92	48.630	Xiphophorus_maculatus