EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000005267 (Gene tree)
Gene ID
100922389
Gene Symbol
-
Alias
RAB5CL|RABL
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Plus strand
Length
44420 bases
Position
chrGL856824.1:148137-192556
Accession
100922389
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000006052MMR_HSR1PF01926.230.000111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000006106-1816XM_012548272ENSSHAP00000006052216 (aa)XP_012403726G3VS97
ENSSHAT00000006105-1870-ENSSHAP00000006051234 (aa)-G3VS96
Gene Model
Click here to download ENSSHAG00000005267's gene model file
Pathways
Pathway IDPathway NameSource
shr04014Ras signaling pathwayKEGG
shr04144EndocytosisKEGG
shr04145PhagosomeKEGG
shr04962Vasopressin-regulated water reabsorptionKEGG
shr05146AmoebiasisKEGG
shr05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005267's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000005267-8936.979ENSSHAG00000011866-9536.979
ENSSHAG00000005267-9048.454ENSSHAG00000016302RAB22A9848.454
ENSSHAG00000005267-10088.018ENSSHAG00000006787RAB5A10088.018
ENSSHAG00000005267-7742.442ENSSHAG00000016787RAB7A8342.442
ENSSHAG00000005267-7937.427ENSSHAG00000013263RAB158336.723
ENSSHAG00000005267-8935.897ENSSHAG00000007153RAB3D8635.897
ENSSHAG00000005267-9042.029ENSSHAG00000006816-9442.029
ENSSHAG00000005267-8934.343ENSSHAG00000012788RAB9B9734.343
ENSSHAG00000005267-9042.512ENSSHAG00000006622RAB11A9442.512
ENSSHAG00000005267-8730.052ENSSHAG00000017856-9430.052
ENSSHAG00000005267-9948.372ENSSHAG00000009306RAB179948.372
ENSSHAG00000005267-8944.845ENSSHAG00000010376-9644.845
ENSSHAG00000005267-8939.623ENSSHAG00000013149-9739.623
ENSSHAG00000005267-9885.308ENSSHAG00000007727RAB5B9885.308
ENSSHAG00000005267-8339.362ENSSHAG00000018081RAB309139.362
ENSSHAG00000005267-7434.706ENSSHAG00000008520-7734.706
ENSSHAG00000005267-9046.907ENSSHAG00000006085RAB319746.907
ENSSHAG00000005267-7733.533ENSSHAG00000006631KRAS9030.939
ENSSHAG00000005267-8941.262ENSSHAG00000013327RAB259341.262
ENSSHAG00000005267-7532.919ENSSHAG00000006379RAB237334.104
ENSSHAG00000005267-8943.590ENSSHAG00000003597RAB1A9443.590
ENSSHAG00000005267-7437.736ENSSHAG00000006833-9637.736
ENSSHAG00000005267-7530.864ENSSHAG00000001457-8430.864
ENSSHAG00000005267-8538.421ENSSHAG00000001489RAB128138.421
ENSSHAG00000005267-9040.500ENSSHAG00000007613RAB189440.500
ENSSHAG00000005267-7642.683ENSSHAG00000017800RAB147642.683
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000005267-10098.148ENSG00000108774RAB5C100100.000Homo_sapiens
ENSSHAG00000005267-9989.767ENSAPOG00000016864rab5c9891.628Acanthochromis_polyacanthus
ENSSHAG00000005267-10097.685ENSAMEG00000006003RAB5C10097.685Ailuropoda_melanoleuca
ENSSHAG00000005267-9989.352ENSACIG00000010896rab5c9890.741Amphilophus_citrinellus
ENSSHAG00000005267-9989.815ENSAOCG00000016614rab5c9891.667Amphiprion_ocellaris
ENSSHAG00000005267-9789.573ENSAPEG00000017868-9791.469Amphiprion_percula
ENSSHAG00000005267-10089.908ENSATEG00000001937rab5c10091.284Anabas_testudineus
ENSSHAG00000005267-9498.529ENSANAG00000025390RAB5C10098.529Aotus_nancymaae
ENSSHAG00000005267-9988.426ENSACLG00000002706rab5c9890.741Astatotilapia_calliptera
ENSSHAG00000005267-9688.152ENSACLG00000008615-9987.671Astatotilapia_calliptera
ENSSHAG00000005267-9688.571ENSAMXG00000037267-9990.952Astyanax_mexicanus
ENSSHAG00000005267-9990.323ENSAMXG00000043717rab5c9891.705Astyanax_mexicanus
ENSSHAG00000005267-10097.685ENSBTAG00000006982RAB5C10097.685Bos_taurus
ENSSHAG00000005267-9974.884WBGene00004268rab-59974.884Caenorhabditis_elegans
ENSSHAG00000005267-10098.148ENSCAFG00000015629RAB5C10098.148Canis_familiaris
ENSSHAG00000005267-10098.148ENSCAFG00020013537RAB5C10098.148Canis_lupus_dingo
ENSSHAG00000005267-10097.685ENSCHIG00000012960RAB5C10097.685Capra_hircus
ENSSHAG00000005267-10098.148ENSTSYG00000030531RAB5C10098.148Carlito_syrichta
ENSSHAG00000005267-10097.222ENSCCAG00000025940RAB5C10097.222Cebus_capucinus
ENSSHAG00000005267-10098.148ENSCATG00000040873RAB5C10098.148Cercocebus_atys
ENSSHAG00000005267-10096.759ENSCLAG00000016650RAB5C10096.759Chinchilla_lanigera
ENSSHAG00000005267-8298.876ENSCHOG00000009886RAB5C10098.876Choloepus_hoffmanni
ENSSHAG00000005267-9975.701ENSCING00000003340-9975.701Ciona_intestinalis
ENSSHAG00000005267-9974.545ENSCSAVG00000000613-9982.716Ciona_savignyi
ENSSHAG00000005267-10097.222ENSCGRG00001014226Rab5c10097.222Cricetulus_griseus_chok1gshd
ENSSHAG00000005267-10097.222ENSCGRG00000007534Rab5c10097.222Cricetulus_griseus_crigri
ENSSHAG00000005267-9990.278ENSCSEG00000017024rab5c9890.278Cynoglossus_semilaevis
ENSSHAG00000005267-9988.889ENSCVAG00000009550rab5c9890.278Cyprinodon_variegatus
ENSSHAG00000005267-10097.222ENSDNOG00000038853RAB5C10097.222Dasypus_novemcinctus
ENSSHAG00000005267-10097.222ENSDORG00000006819Rab5c10097.222Dipodomys_ordii
ENSSHAG00000005267-9974.648FBgn0014010Rab59574.648Drosophila_melanogaster
ENSSHAG00000005267-9979.263ENSEBUG00000014794rab5c10079.263Eptatretus_burgeri
ENSSHAG00000005267-10097.685ENSEASG00005009281RAB5C10097.685Equus_asinus_asinus
ENSSHAG00000005267-10098.148ENSECAG00000025054RAB5C10098.148Equus_caballus
ENSSHAG00000005267-10097.685ENSEEUG00000002790RAB5C10097.685Erinaceus_europaeus
ENSSHAG00000005267-9988.426ENSELUG00000018516rab5c9990.278Esox_lucius
ENSSHAG00000005267-9988.889ENSELUG00000010439-9888.889Esox_lucius
ENSSHAG00000005267-10097.685ENSFCAG00000002148RAB5C10097.685Felis_catus
ENSSHAG00000005267-10094.907ENSFDAG00000021541RAB5C10094.907Fukomys_damarensis
ENSSHAG00000005267-9989.815ENSFHEG00000012117rab5c9891.204Fundulus_heteroclitus
ENSSHAG00000005267-9990.783ENSFHEG00000015268-9990.783Fundulus_heteroclitus
ENSSHAG00000005267-7887.574ENSGMOG00000001876-9887.574Gadus_morhua
ENSSHAG00000005267-9988.426ENSGMOG00000015096rab5c9890.741Gadus_morhua
ENSSHAG00000005267-9990.278ENSGAFG00000000884rab5c9891.667Gambusia_affinis
ENSSHAG00000005267-9690.431ENSGAFG00000003642-9987.273Gambusia_affinis
ENSSHAG00000005267-8795.213ENSGACG00000008659rab5c9887.037Gasterosteus_aculeatus
ENSSHAG00000005267-10098.148ENSGGOG00000005472RAB5C10098.148Gorilla_gorilla
ENSSHAG00000005267-9988.426ENSHBUG00000002014rab5c9890.741Haplochromis_burtoni
ENSSHAG00000005267-9688.152ENSHBUG00000006823-9987.671Haplochromis_burtoni
ENSSHAG00000005267-10093.981ENSHGLG00000012067RAB5C10093.981Heterocephalus_glaber_female
ENSSHAG00000005267-9990.323ENSHCOG00000004662rab5c9791.244Hippocampus_comes
ENSSHAG00000005267-9781.604ENSHCOG00000020238-10080.000Hippocampus_comes
ENSSHAG00000005267-9688.571ENSIPUG00000020082rab5c9889.450Ictalurus_punctatus
ENSSHAG00000005267-10096.296ENSSTOG00000006620RAB5C10096.296Ictidomys_tridecemlineatus
ENSSHAG00000005267-10097.685ENSJJAG00000021181Rab5c10097.685Jaculus_jaculus
ENSSHAG00000005267-9988.018ENSKMAG00000017417-9988.018Kryptolebias_marmoratus
ENSSHAG00000005267-9989.352ENSKMAG00000020038rab5c9891.204Kryptolebias_marmoratus
ENSSHAG00000005267-10088.073ENSLBEG00000010408-9988.073Labrus_bergylta
ENSSHAG00000005267-9990.741ENSLBEG00000004128rab5c9892.130Labrus_bergylta
ENSSHAG00000005267-9994.393ENSLOCG00000012566rab5c10094.393Lepisosteus_oculatus
ENSSHAG00000005267-10098.148ENSMFAG00000039627RAB5C10098.148Macaca_fascicularis
ENSSHAG00000005267-10098.148ENSMNEG00000000355RAB5C10098.148Macaca_nemestrina
ENSSHAG00000005267-9988.479ENSMAMG00000016207-9988.479Mastacembelus_armatus
ENSSHAG00000005267-9988.889ENSMAMG00000022322rab5c9890.741Mastacembelus_armatus
ENSSHAG00000005267-9988.426ENSMZEG00005022735rab5c9890.741Maylandia_zebra
ENSSHAG00000005267-9688.152ENSMZEG00005021090-9987.671Maylandia_zebra
ENSSHAG00000005267-10097.685ENSMAUG00000015005Rab5c10097.685Mesocricetus_auratus
ENSSHAG00000005267-10097.685ENSMICG00000041608RAB5C10097.685Microcebus_murinus
ENSSHAG00000005267-10097.685ENSMOCG00000018531-10097.685Microtus_ochrogaster
ENSSHAG00000005267-10089.908ENSMMOG00000020621rab5c9989.908Mola_mola
ENSSHAG00000005267-9784.834ENSMALG00000006052rab5c9684.651Monopterus_albus
ENSSHAG00000005267-9986.697ENSMALG00000022348-9986.697Monopterus_albus
ENSSHAG00000005267-10097.222MGP_CAROLIEiJ_G0017184Rab5c10097.222Mus_caroli
ENSSHAG00000005267-10097.222ENSMUSG00000019173Rab5c10097.222Mus_musculus
ENSSHAG00000005267-10097.222MGP_PahariEiJ_G0018314Rab5c10097.222Mus_pahari
ENSSHAG00000005267-10097.222MGP_SPRETEiJ_G0018027Rab5c10097.222Mus_spretus
ENSSHAG00000005267-10097.685ENSMPUG00000010554RAB5C10097.685Mustela_putorius_furo
ENSSHAG00000005267-10097.685ENSNGAG00000010286Rab5c10097.685Nannospalax_galili
ENSSHAG00000005267-9989.352ENSNBRG00000018165rab5c9891.667Neolamprologus_brichardi
ENSSHAG00000005267-9688.152ENSNBRG00000016922-9987.671Neolamprologus_brichardi
ENSSHAG00000005267-8292.135ENSOPRG00000008255RAB5C10092.135Ochotona_princeps
ENSSHAG00000005267-10095.833ENSODEG00000017920RAB5C10095.833Octodon_degus
ENSSHAG00000005267-9989.352ENSONIG00000001113rab5c9891.667Oreochromis_niloticus
ENSSHAG00000005267-10088.532ENSORLG00000003882rab5c10089.908Oryzias_latipes
ENSSHAG00000005267-10089.450ENSORLG00020008388rab5c10089.450Oryzias_latipes_hni
ENSSHAG00000005267-10088.532ENSORLG00015021900rab5c10089.908Oryzias_latipes_hsok
ENSSHAG00000005267-10088.532ENSOMEG00000023078rab5c10089.908Oryzias_melastigma
ENSSHAG00000005267-10097.685ENSOGAG00000009456RAB5C10097.685Otolemur_garnettii
ENSSHAG00000005267-10097.685ENSOARG00000018768RAB5C10097.685Ovis_aries
ENSSHAG00000005267-10098.148ENSPPAG00000037206RAB5C10098.148Pan_paniscus
ENSSHAG00000005267-10097.685ENSPPRG00000005745RAB5C10097.685Panthera_pardus
ENSSHAG00000005267-10097.685ENSPTIG00000008177RAB5C10097.685Panthera_tigris_altaica
ENSSHAG00000005267-10098.148ENSPTRG00000009194RAB5C10098.148Pan_troglodytes
ENSSHAG00000005267-9989.767ENSPKIG00000001237-9989.767Paramormyrops_kingsleyae
ENSSHAG00000005267-9986.574ENSPKIG00000020112-9986.574Paramormyrops_kingsleyae
ENSSHAG00000005267-9986.574ENSPMGG00000010792rab5c9790.047Periophthalmus_magnuspinnatus
ENSSHAG00000005267-10097.685ENSPEMG00000017971Rab5c10097.685Peromyscus_maniculatus_bairdii
ENSSHAG00000005267-9980.000ENSPMAG00000001399rab5c10080.000Petromyzon_marinus
ENSSHAG00000005267-9978.829ENSPMAG00000000008rab5c10078.829Petromyzon_marinus
ENSSHAG00000005267-9980.374ENSPMAG00000007867rab5c9980.374Petromyzon_marinus
ENSSHAG00000005267-10099.537ENSPCIG00000020225-10099.537Phascolarctos_cinereus
ENSSHAG00000005267-9990.278ENSPLAG00000004790rab5c9891.667Poecilia_latipinna
ENSSHAG00000005267-9988.940ENSPLAG00000016333-9988.940Poecilia_latipinna
ENSSHAG00000005267-9990.278ENSPMEG00000011336rab5c9891.667Poecilia_mexicana
ENSSHAG00000005267-9887.793ENSPMEG00000012614-9887.671Poecilia_mexicana
ENSSHAG00000005267-8792.063ENSPREG00000022167-8993.443Poecilia_reticulata
ENSSHAG00000005267-9990.278ENSPREG00000010146rab5c9891.667Poecilia_reticulata
ENSSHAG00000005267-10098.148ENSPPYG00000008398RAB5C10098.148Pongo_abelii
ENSSHAG00000005267-10096.759ENSPCAG00000016412RAB5C10096.759Procavia_capensis
ENSSHAG00000005267-10096.759ENSPCOG00000026327RAB5C10096.759Propithecus_coquereli
ENSSHAG00000005267-10098.148ENSPVAG00000003867RAB5C10098.148Pteropus_vampyrus
ENSSHAG00000005267-9688.152ENSPNYG00000015851-9987.671Pundamilia_nyererei
ENSSHAG00000005267-9988.426ENSPNYG00000010615rab5c9890.741Pundamilia_nyererei
ENSSHAG00000005267-9786.792ENSPNAG00000002218-9989.151Pygocentrus_nattereri
ENSSHAG00000005267-9991.705ENSPNAG00000028138rab5c9891.705Pygocentrus_nattereri
ENSSHAG00000005267-10097.685ENSRNOG00000018568Rab5c10097.685Rattus_norvegicus
ENSSHAG00000005267-10098.148ENSRBIG00000031376RAB5C10098.148Rhinopithecus_bieti
ENSSHAG00000005267-10098.148ENSRROG00000032895RAB5C10098.148Rhinopithecus_roxellana
ENSSHAG00000005267-10097.222ENSSBOG00000032552-10097.222Saimiri_boliviensis_boliviensis
ENSSHAG00000005267-9987.558ENSSFOG00015009988-9987.558Scleropages_formosus
ENSSHAG00000005267-9692.308ENSSMAG00000007323rab5c9890.278Scophthalmus_maximus
ENSSHAG00000005267-9991.667ENSSDUG00000023008rab5c9891.667Seriola_dumerili
ENSSHAG00000005267-9991.204ENSSLDG00000017771rab5c9891.204Seriola_lalandi_dorsalis
ENSSHAG00000005267-10096.759ENSSPUG00000012950-10096.759Sphenodon_punctatus
ENSSHAG00000005267-9990.278ENSSPAG00000006436rab5c9892.593Stegastes_partitus
ENSSHAG00000005267-10097.685ENSSSCG00000032467RAB5C10097.685Sus_scrofa
ENSSHAG00000005267-9988.426ENSTRUG00000015590rab5c9890.741Takifugu_rubripes
ENSSHAG00000005267-9691.866ENSTNIG00000011711rab5c9591.866Tetraodon_nigroviridis
ENSSHAG00000005267-10098.611ENSTBEG00000007092RAB5C10098.611Tupaia_belangeri
ENSSHAG00000005267-10096.759ENSTTRG00000006673RAB5C10096.759Tursiops_truncatus
ENSSHAG00000005267-10097.685ENSUAMG00000024343RAB5C10097.685Ursus_americanus
ENSSHAG00000005267-10097.685ENSUMAG00000023270RAB5C10097.685Ursus_maritimus
ENSSHAG00000005267-9690.909ENSXCOG00000006300-9987.330Xiphophorus_couchianus
ENSSHAG00000005267-9989.815ENSXCOG00000016788rab5c9891.667Xiphophorus_couchianus
ENSSHAG00000005267-9989.401ENSXMAG00000022179-9989.401Xiphophorus_maculatus
ENSSHAG00000005267-9990.278ENSXMAG00000003266rab5c9891.667Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us