EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000005334 (Gene tree)
Gene ID: 100918496
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 15753 bases
Position: chrGL834428.1:152260-168012
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006129	GUCT	PF08152.12	9.1e-34	1	1
ENSSHAP00000006129	ResIII	PF04851.15	4.6e-07	1	1
ENSSHAP00000006129	DEAD	PF00270.29	1.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006183	-	2286	-	ENSSHAP00000006129	762 (aa)	-	G3VSH4

Gene Model

Click here to download ENSSHAG00000005334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000005334	-	52	34.606	ENSSHAG00000016933	-	61	36.712
ENSSHAG00000005334	-	51	30.730	ENSSHAG00000004638	-	79	31.452
ENSSHAG00000005334	-	51	30.730	ENSSHAG00000005751	-	86	31.452
ENSSHAG00000005334	-	73	71.661	ENSSHAG00000005690	DDX50	94	64.352

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005334	-	80	67.492	ENSG00000107625	DDX50	84	65.463	Homo_sapiens
ENSSHAG00000005334	-	80	67.430	ENSAMEG00000017992	DDX50	79	67.613	Ailuropoda_melanoleuca
ENSSHAG00000005334	-	57	68.664	ENSANAG00000017785	-	52	78.371	Aotus_nancymaae
ENSSHAG00000005334	-	85	64.308	ENSBTAG00000033413	DDX50	84	65.566	Bos_taurus
ENSSHAG00000005334	-	80	67.657	ENSCJAG00000018844	DDX50	84	65.306	Callithrix_jacchus
ENSSHAG00000005334	-	86	64.526	ENSCAFG00000013776	DDX50	85	67.446	Canis_familiaris
ENSSHAG00000005334	-	85	64.462	ENSCAFG00020025977	DDX50	79	67.672	Canis_lupus_dingo
ENSSHAG00000005334	-	85	64.341	ENSCHIG00000000285	DDX50	84	65.252	Capra_hircus
ENSSHAG00000005334	-	80	67.657	ENSTSYG00000004192	DDX50	82	67.780	Carlito_syrichta
ENSSHAG00000005334	-	78	55.892	ENSCAPG00000007230	-	75	56.367	Cavia_aperea
ENSSHAG00000005334	-	78	68.013	ENSCPOG00000002131	-	78	68.591	Cavia_porcellus
ENSSHAG00000005334	-	86	53.064	ENSCCAG00000030543	DDX50	81	59.000	Cebus_capucinus
ENSSHAG00000005334	-	78	47.128	ENSCATG00000039259	-	79	52.145	Cercocebus_atys
ENSSHAG00000005334	-	81	48.631	ENSCATG00000035153	-	89	59.875	Cercocebus_atys
ENSSHAG00000005334	-	80	67.657	ENSCATG00000032463	DDX50	85	65.306	Cercocebus_atys
ENSSHAG00000005334	-	73	49.192	ENSCLAG00000001938	-	75	50.280	Chinchilla_lanigera
ENSSHAG00000005334	-	79	67.330	ENSCLAG00000012957	-	79	67.780	Chinchilla_lanigera
ENSSHAG00000005334	-	80	67.657	ENSCSAG00000007703	DDX50	84	65.306	Chlorocebus_sabaeus
ENSSHAG00000005334	-	80	66.172	ENSCHOG00000000233	DDX50	88	66.778	Choloepus_hoffmanni
ENSSHAG00000005334	-	84	46.106	ENSCANG00000028077	-	73	47.928	Colobus_angolensis_palliatus
ENSSHAG00000005334	-	74	51.773	ENSCANG00000018820	-	83	52.844	Colobus_angolensis_palliatus
ENSSHAG00000005334	-	86	52.090	ENSCANG00000036450	-	83	53.344	Colobus_angolensis_palliatus
ENSSHAG00000005334	-	80	66.186	ENSCGRG00001020223	Ddx50	75	70.991	Cricetulus_griseus_chok1gshd
ENSSHAG00000005334	-	79	66.238	ENSCGRG00000015884	Ddx50	75	70.991	Cricetulus_griseus_crigri
ENSSHAG00000005334	-	75	66.435	ENSDNOG00000001675	DDX50	81	70.498	Dasypus_novemcinctus
ENSSHAG00000005334	-	79	67.384	ENSDORG00000007310	Ddx50	79	67.672	Dipodomys_ordii
ENSSHAG00000005334	-	77	69.036	ENSETEG00000014069	DDX50	66	72.414	Echinops_telfairi
ENSSHAG00000005334	-	88	63.487	ENSEASG00005015595	DDX50	75	70.991	Equus_asinus_asinus
ENSSHAG00000005334	-	88	63.636	ENSECAG00000023044	DDX50	75	71.171	Equus_caballus
ENSSHAG00000005334	-	75	70.261	ENSEEUG00000005782	DDX50	75	71.790	Erinaceus_europaeus
ENSSHAG00000005334	-	85	64.651	ENSFCAG00000012678	DDX50	79	67.613	Felis_catus
ENSSHAG00000005334	-	79	64.511	ENSFDAG00000016109	-	73	67.568	Fukomys_damarensis
ENSSHAG00000005334	-	86	63.540	ENSGGOG00000010100	DDX50	84	65.463	Gorilla_gorilla
ENSSHAG00000005334	-	80	67.377	ENSHGLG00000013466	DDX50	83	65.600	Heterocephalus_glaber_female
ENSSHAG00000005334	-	80	67.377	ENSHGLG00100017191	DDX50	83	65.600	Heterocephalus_glaber_male
ENSSHAG00000005334	-	80	48.677	ENSHGLG00100006568	-	72	60.490	Heterocephalus_glaber_male
ENSSHAG00000005334	-	79	66.942	ENSSTOG00000021852	-	83	65.161	Ictidomys_tridecemlineatus
ENSSHAG00000005334	-	78	51.414	ENSJJAG00000019626	-	75	52.962	Jaculus_jaculus
ENSSHAG00000005334	-	90	62.135	ENSJJAG00000023928	-	74	71.691	Jaculus_jaculus
ENSSHAG00000005334	-	80	67.162	ENSLAFG00000006186	DDX50	85	65.252	Loxodonta_africana
ENSSHAG00000005334	-	77	50.683	ENSMFAG00000045339	-	88	59.561	Macaca_fascicularis
ENSSHAG00000005334	-	86	61.689	ENSMFAG00000044067	DDX50	84	65.306	Macaca_fascicularis
ENSSHAG00000005334	-	80	67.657	ENSMMUG00000001006	DDX50	82	71.171	Macaca_mulatta
ENSSHAG00000005334	-	78	47.892	ENSMMUG00000045343	-	73	49.817	Macaca_mulatta
ENSSHAG00000005334	-	83	48.031	ENSMNEG00000045530	-	89	60.188	Macaca_nemestrina
ENSSHAG00000005334	-	86	58.974	ENSMNEG00000031664	DDX50	83	60.883	Macaca_nemestrina
ENSSHAG00000005334	-	83	47.492	ENSMLEG00000041988	-	87	58.934	Mandrillus_leucophaeus
ENSSHAG00000005334	-	86	62.745	ENSMLEG00000037313	DDX50	84	64.364	Mandrillus_leucophaeus
ENSSHAG00000005334	-	80	63.443	ENSMICG00000017539	DDX50	84	63.443	Microcebus_murinus
ENSSHAG00000005334	-	80	66.346	ENSMOCG00000001676	Ddx50	75	70.991	Microtus_ochrogaster
ENSSHAG00000005334	-	73	71.661	ENSMODG00000010741	DDX50	84	65.728	Monodelphis_domestica
ENSSHAG00000005334	-	80	67.423	MGP_CAROLIEiJ_G0015389	Ddx50	75	71.043	Mus_caroli
ENSSHAG00000005334	-	80	67.423	ENSMUSG00000020076	Ddx50	79	67.613	Mus_musculus
ENSSHAG00000005334	-	80	67.423	MGP_PahariEiJ_G0030805	Ddx50	79	67.613	Mus_pahari
ENSSHAG00000005334	-	80	67.423	MGP_SPRETEiJ_G0016200	Ddx50	79	67.613	Mus_spretus
ENSSHAG00000005334	-	81	65.798	ENSMPUG00000004589	DDX50	85	69.449	Mustela_putorius_furo
ENSSHAG00000005334	-	80	66.337	ENSMLUG00000017590	DDX50	84	64.151	Myotis_lucifugus
ENSSHAG00000005334	-	79	67.164	ENSNGAG00000004283	Ddx50	79	67.500	Nannospalax_galili
ENSSHAG00000005334	-	87	63.338	ENSNLEG00000011631	DDX50	84	65.306	Nomascus_leucogenys
ENSSHAG00000005334	-	75	52.007	ENSNLEG00000035506	-	86	52.848	Nomascus_leucogenys
ENSSHAG00000005334	-	80	66.019	ENSOPRG00000001619	DDX50	75	70.705	Ochotona_princeps
ENSSHAG00000005334	-	79	66.833	ENSODEG00000014597	-	75	71.171	Octodon_degus
ENSSHAG00000005334	-	99	59.097	ENSOANG00000004776	DDX50	82	65.309	Ornithorhynchus_anatinus
ENSSHAG00000005334	-	81	66.561	ENSOCUG00000002879	DDX50	78	70.631	Oryctolagus_cuniculus
ENSSHAG00000005334	-	80	67.492	ENSOGAG00000001844	DDX50	75	71.351	Otolemur_garnettii
ENSSHAG00000005334	-	85	64.651	ENSOARG00000005264	DDX50	84	65.463	Ovis_aries
ENSSHAG00000005334	-	86	63.868	ENSPPAG00000040723	DDX50	84	65.463	Pan_paniscus
ENSSHAG00000005334	-	85	64.651	ENSPPRG00000015826	DDX50	82	67.839	Panthera_pardus
ENSSHAG00000005334	-	85	64.651	ENSPTIG00000008454	DDX50	82	67.839	Panthera_tigris_altaica
ENSSHAG00000005334	-	86	63.868	ENSPTRG00000002562	DDX50	84	65.463	Pan_troglodytes
ENSSHAG00000005334	-	86	58.069	ENSPANG00000022143	-	81	61.809	Papio_anubis
ENSSHAG00000005334	-	78	67.003	ENSPEMG00000020899	-	74	71.324	Peromyscus_maniculatus_bairdii
ENSSHAG00000005334	-	73	71.661	ENSPCIG00000016036	DDX50	88	64.516	Phascolarctos_cinereus
ENSSHAG00000005334	-	80	67.492	ENSPPYG00000002390	DDX50	82	71.171	Pongo_abelii
ENSSHAG00000005334	-	75	56.469	ENSPCAG00000009692	DDX50	95	55.333	Procavia_capensis
ENSSHAG00000005334	-	61	61.803	ENSPCOG00000012574	DDX50	71	61.803	Propithecus_coquereli
ENSSHAG00000005334	-	66	67.931	ENSPVAG00000009519	DDX50	70	64.577	Pteropus_vampyrus
ENSSHAG00000005334	-	80	67.261	ENSRNOG00000000396	Ddx50	81	66.450	Rattus_norvegicus
ENSSHAG00000005334	-	80	44.754	ENSRBIG00000039673	-	70	45.242	Rhinopithecus_bieti
ENSSHAG00000005334	-	75	68.881	ENSRBIG00000042841	-	93	69.272	Rhinopithecus_bieti
ENSSHAG00000005334	-	72	51.361	ENSRBIG00000036573	-	80	52.273	Rhinopithecus_bieti
ENSSHAG00000005334	-	72	50.000	ENSRROG00000022853	-	80	48.026	Rhinopithecus_roxellana
ENSSHAG00000005334	-	80	67.657	ENSRROG00000032158	DDX50	82	71.171	Rhinopithecus_roxellana
ENSSHAG00000005334	-	86	55.505	ENSSBOG00000014441	DDX50	90	58.092	Saimiri_boliviensis_boliviensis
ENSSHAG00000005334	-	83	58.136	ENSSARG00000013553	DDX50	75	62.943	Sorex_araneus
ENSSHAG00000005334	-	85	64.660	ENSSSCG00000010246	DDX50	75	70.991	Sus_scrofa
ENSSHAG00000005334	-	80	47.690	ENSTBEG00000001085	DDX50	75	50.090	Tupaia_belangeri
ENSSHAG00000005334	-	80	61.221	ENSTTRG00000012408	DDX50	79	61.269	Tursiops_truncatus
ENSSHAG00000005334	-	80	67.267	ENSUAMG00000010976	DDX50	89	70.377	Ursus_americanus
ENSSHAG00000005334	-	80	67.267	ENSUMAG00000007726	DDX50	84	65.815	Ursus_maritimus
ENSSHAG00000005334	-	93	60.790	ENSVPAG00000000626	DDX50	79	67.780	Vicugna_pacos
ENSSHAG00000005334	-	80	60.522	ENSVVUG00000020366	DDX50	82	71.457	Vulpes_vulpes