EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000005367 (Gene tree)
Gene ID: 100918909
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 14630 bases
Position: chrGL857023.1:154387-169016
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006169	KH_1	PF00013.29	5.5e-70	1	4
ENSSHAP00000006169	KH_1	PF00013.29	5.5e-70	2	4
ENSSHAP00000006169	KH_1	PF00013.29	5.5e-70	3	4
ENSSHAP00000006169	KH_1	PF00013.29	5.5e-70	4	4
ENSSHAP00000006170	KH_1	PF00013.29	6.1e-70	1	4
ENSSHAP00000006170	KH_1	PF00013.29	6.1e-70	2	4
ENSSHAP00000006170	KH_1	PF00013.29	6.1e-70	3	4
ENSSHAP00000006170	KH_1	PF00013.29	6.1e-70	4	4
ENSSHAP00000006169	KH_2	PF07650.17	7.1e-23	1	2
ENSSHAP00000006169	KH_2	PF07650.17	7.1e-23	2	2
ENSSHAP00000006170	KH_2	PF07650.17	2.6e-22	1	2
ENSSHAP00000006170	KH_2	PF07650.17	2.6e-22	2	2
ENSSHAP00000006169	DUF1897	PF09005.10	1.1e-12	1	2
ENSSHAP00000006169	DUF1897	PF09005.10	1.1e-12	2	2
ENSSHAP00000006170	DUF1897	PF09005.10	1.7e-12	1	2
ENSSHAP00000006170	DUF1897	PF09005.10	1.7e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006223	FUBP1-201	1721	-	ENSSHAP00000006169	552 (aa)	-	G3VSL4
ENSSHAT00000006224	FUBP1-202	1860	-	ENSSHAP00000006170	619 (aa)	-	G3VSL5

Gene Model

Click here to download ENSSHAG00000005367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000005367	FUBP1	96	56.320	ENSSHAG00000015689	FUBP3	57	68.966
ENSSHAG00000005367	FUBP1	64	30.909	ENSSHAG00000007163	-	73	30.968
ENSSHAG00000005367	FUBP1	70	40.625	ENSSHAG00000007890	-	71	31.633
ENSSHAG00000005367	FUBP1	96	60.141	ENSSHAG00000011383	KHSRP	62	66.015
ENSSHAG00000005367	FUBP1	58	30.769	ENSSHAG00000007362	PCBP4	62	30.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005367	FUBP1	100	98.373	ENSG00000162613	FUBP1	94	97.694	Homo_sapiens
ENSSHAG00000005367	FUBP1	98	73.358	ENSAPOG00000014845	fubp1	65	74.825	Acanthochromis_polyacanthus
ENSSHAG00000005367	FUBP1	100	98.553	ENSAMEG00000007372	FUBP1	94	94.286	Ailuropoda_melanoleuca
ENSSHAG00000005367	FUBP1	99	71.949	ENSACIG00000020024	fubp1	64	72.922	Amphilophus_citrinellus
ENSSHAG00000005367	FUBP1	99	68.488	ENSAPEG00000012232	fubp1	67	77.488	Amphiprion_percula
ENSSHAG00000005367	FUBP1	98	74.586	ENSATEG00000018619	fubp1	65	78.469	Anabas_testudineus
ENSSHAG00000005367	FUBP1	99	97.278	ENSAPLG00000005965	FUBP1	100	96.370	Anas_platyrhynchos
ENSSHAG00000005367	FUBP1	99	90.526	ENSACAG00000006310	FUBP1	91	86.265	Anolis_carolinensis
ENSSHAG00000005367	FUBP1	98	72.943	ENSACLG00000006708	fubp1	66	78.230	Astatotilapia_calliptera
ENSSHAG00000005367	FUBP1	98	77.612	ENSAMXG00000005525	fubp1	64	85.756	Astyanax_mexicanus
ENSSHAG00000005367	FUBP1	100	98.732	ENSCJAG00000007062	FUBP1	94	97.858	Callithrix_jacchus
ENSSHAG00000005367	FUBP1	100	98.553	ENSCAFG00000020361	FUBP1	94	97.858	Canis_familiaris
ENSSHAG00000005367	FUBP1	100	97.830	ENSTSYG00000000148	FUBP1	100	97.249	Carlito_syrichta
ENSSHAG00000005367	FUBP1	64	98.450	ENSCAPG00000011052	-	67	96.739	Cavia_aperea
ENSSHAG00000005367	FUBP1	100	96.945	ENSCPOG00000002757	FUBP1	98	98.630	Cavia_porcellus
ENSSHAG00000005367	FUBP1	100	80.968	ENSCCAG00000036537	FUBP1	93	81.290	Cebus_capucinus
ENSSHAG00000005367	FUBP1	100	98.373	ENSCATG00000042126	FUBP1	94	97.694	Cercocebus_atys
ENSSHAG00000005367	FUBP1	100	98.553	ENSCLAG00000005621	FUBP1	100	98.718	Chinchilla_lanigera
ENSSHAG00000005367	FUBP1	100	98.373	ENSCSAG00000001402	FUBP1	94	97.694	Chlorocebus_sabaeus
ENSSHAG00000005367	FUBP1	100	97.577	ENSCHOG00000008177	FUBP1	94	97.577	Choloepus_hoffmanni
ENSSHAG00000005367	FUBP1	100	98.734	ENSCGRG00001007103	Fubp1	95	97.213	Cricetulus_griseus_chok1gshd
ENSSHAG00000005367	FUBP1	100	98.201	ENSCGRG00000003372	Fubp1	100	97.315	Cricetulus_griseus_crigri
ENSSHAG00000005367	FUBP1	100	72.172	ENSCSEG00000021412	fubp1	64	77.251	Cynoglossus_semilaevis
ENSSHAG00000005367	FUBP1	98	73.551	ENSCVAG00000014487	fubp1	60	84.419	Cyprinodon_variegatus
ENSSHAG00000005367	FUBP1	99	70.973	ENSDARG00000029248	fubp1	66	76.457	Danio_rerio
ENSSHAG00000005367	FUBP1	97	56.410	ENSDNOG00000034565	-	68	73.750	Dasypus_novemcinctus
ENSSHAG00000005367	FUBP1	100	97.738	ENSDORG00000016534	Fubp1	94	97.738	Dipodomys_ordii
ENSSHAG00000005367	FUBP1	76	97.106	ENSETEG00000000948	-	56	97.106	Echinops_telfairi
ENSSHAG00000005367	FUBP1	96	47.101	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSSHAG00000005367	FUBP1	99	94.737	ENSEEUG00000001287	FUBP1	85	94.737	Erinaceus_europaeus
ENSSHAG00000005367	FUBP1	98	69.355	ENSELUG00000007990	fubp1	66	74.707	Esox_lucius
ENSSHAG00000005367	FUBP1	99	97.278	ENSFALG00000005768	FUBP1	92	95.731	Ficedula_albicollis
ENSSHAG00000005367	FUBP1	100	97.577	ENSFDAG00000014210	FUBP1	100	98.630	Fukomys_damarensis
ENSSHAG00000005367	FUBP1	99	73.370	ENSFHEG00000005230	fubp1	65	82.440	Fundulus_heteroclitus
ENSSHAG00000005367	FUBP1	99	68.364	ENSGMOG00000003370	fubp1	65	69.524	Gadus_morhua
ENSSHAG00000005367	FUBP1	100	97.112	ENSGALG00000008939	FUBP1	98	96.217	Gallus_gallus
ENSSHAG00000005367	FUBP1	99	73.370	ENSGAFG00000020972	fubp1	86	78.025	Gambusia_affinis
ENSSHAG00000005367	FUBP1	99	72.924	ENSGACG00000016563	fubp1	65	76.429	Gasterosteus_aculeatus
ENSSHAG00000005367	FUBP1	99	71.579	ENSHBUG00000009835	fubp1	79	76.722	Haplochromis_burtoni
ENSSHAG00000005367	FUBP1	100	97.842	ENSHGLG00000008415	-	100	98.718	Heterocephalus_glaber_female
ENSSHAG00000005367	FUBP1	100	81.947	ENSHGLG00000002808	-	66	90.191	Heterocephalus_glaber_female
ENSSHAG00000005367	FUBP1	100	82.655	ENSHGLG00100001414	-	66	90.909	Heterocephalus_glaber_male
ENSSHAG00000005367	FUBP1	100	97.842	ENSHGLG00100003417	-	94	97.049	Heterocephalus_glaber_male
ENSSHAG00000005367	FUBP1	99	71.403	ENSHCOG00000000910	fubp1	66	75.172	Hippocampus_comes
ENSSHAG00000005367	FUBP1	99	77.477	ENSIPUG00000009896	fubp1	65	78.147	Ictalurus_punctatus
ENSSHAG00000005367	FUBP1	100	98.553	ENSSTOG00000014312	FUBP1	94	97.858	Ictidomys_tridecemlineatus
ENSSHAG00000005367	FUBP1	100	97.297	ENSJJAG00000020069	Fubp1	100	98.630	Jaculus_jaculus
ENSSHAG00000005367	FUBP1	99	74.094	ENSKMAG00000018897	fubp1	57	84.181	Kryptolebias_marmoratus
ENSSHAG00000005367	FUBP1	99	69.964	ENSLBEG00000012700	fubp1	68	75.229	Labrus_bergylta
ENSSHAG00000005367	FUBP1	97	75.445	ENSLOCG00000003745	fubp1	87	76.244	Lepisosteus_oculatus
ENSSHAG00000005367	FUBP1	99	98.732	ENSLAFG00000003273	FUBP1	100	97.297	Loxodonta_africana
ENSSHAG00000005367	FUBP1	100	98.551	ENSMFAG00000031825	FUBP1	94	97.694	Macaca_fascicularis
ENSSHAG00000005367	FUBP1	100	98.373	ENSMMUG00000002899	FUBP1	94	97.694	Macaca_mulatta
ENSSHAG00000005367	FUBP1	100	98.373	ENSMNEG00000045212	FUBP1	94	97.694	Macaca_nemestrina
ENSSHAG00000005367	FUBP1	99	71.930	ENSMAMG00000007489	fubp1	76	53.750	Mastacembelus_armatus
ENSSHAG00000005367	FUBP1	99	74.499	ENSMZEG00005024298	fubp1	65	78.910	Maylandia_zebra
ENSSHAG00000005367	FUBP1	100	96.751	ENSMGAG00000009424	FUBP1	92	96.751	Meleagris_gallopavo
ENSSHAG00000005367	FUBP1	99	98.370	ENSMAUG00000016428	Fubp1	100	97.315	Mesocricetus_auratus
ENSSHAG00000005367	FUBP1	99	98.720	ENSMOCG00000014751	Fubp1	98	98.630	Microtus_ochrogaster
ENSSHAG00000005367	FUBP1	99	73.140	ENSMMOG00000019463	fubp1	64	82.254	Mola_mola
ENSSHAG00000005367	FUBP1	99	91.228	ENSMODG00000020804	FUBP1	98	91.054	Monodelphis_domestica
ENSSHAG00000005367	FUBP1	99	72.000	ENSMALG00000015173	fubp1	65	77.251	Monopterus_albus
ENSSHAG00000005367	FUBP1	100	97.658	MGP_CAROLIEiJ_G0025740	Fubp1	100	97.315	Mus_caroli
ENSSHAG00000005367	FUBP1	100	97.297	ENSMUSG00000028034	Fubp1	100	96.644	Mus_musculus
ENSSHAG00000005367	FUBP1	100	98.018	MGP_PahariEiJ_G0027191	Fubp1	100	97.315	Mus_pahari
ENSSHAG00000005367	FUBP1	100	97.477	MGP_SPRETEiJ_G0026693	Fubp1	100	97.315	Mus_spretus
ENSSHAG00000005367	FUBP1	100	97.662	ENSMLUG00000014802	FUBP1	94	93.523	Myotis_lucifugus
ENSSHAG00000005367	FUBP1	100	98.022	ENSNGAG00000014302	Fubp1	100	97.315	Nannospalax_galili
ENSSHAG00000005367	FUBP1	99	70.092	ENSNBRG00000015099	fubp1	66	78.230	Neolamprologus_brichardi
ENSSHAG00000005367	FUBP1	99	95.978	ENSNLEG00000009772	FUBP1	94	93.421	Nomascus_leucogenys
ENSSHAG00000005367	FUBP1	96	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSSHAG00000005367	FUBP1	90	95.890	ENSOPRG00000001175	FUBP1	85	95.890	Ochotona_princeps
ENSSHAG00000005367	FUBP1	100	97.415	ENSODEG00000002600	-	100	98.630	Octodon_degus
ENSSHAG00000005367	FUBP1	99	68.909	ENSODEG00000003657	-	94	65.842	Octodon_degus
ENSSHAG00000005367	FUBP1	98	71.506	ENSONIG00000018381	fubp1	65	78.910	Oreochromis_niloticus
ENSSHAG00000005367	FUBP1	100	93.493	ENSOANG00000009777	FUBP1	99	92.611	Ornithorhynchus_anatinus
ENSSHAG00000005367	FUBP1	98	68.450	ENSORLG00000003540	fubp1	66	77.751	Oryzias_latipes
ENSSHAG00000005367	FUBP1	99	69.043	ENSORLG00020005908	fubp1	66	77.033	Oryzias_latipes_hni
ENSSHAG00000005367	FUBP1	98	72.878	ENSORLG00015008779	fubp1	64	78.230	Oryzias_latipes_hsok
ENSSHAG00000005367	FUBP1	99	73.162	ENSOMEG00000021943	fubp1	60	82.436	Oryzias_melastigma
ENSSHAG00000005367	FUBP1	100	97.846	ENSOGAG00000014233	FUBP1	94	94.146	Otolemur_garnettii
ENSSHAG00000005367	FUBP1	100	98.556	ENSOARG00000013259	FUBP1	94	94.737	Ovis_aries
ENSSHAG00000005367	FUBP1	100	98.553	ENSPPRG00000000413	FUBP1	94	97.858	Panthera_pardus
ENSSHAG00000005367	FUBP1	100	98.553	ENSPTIG00000019450	FUBP1	94	97.858	Panthera_tigris_altaica
ENSSHAG00000005367	FUBP1	100	96.926	ENSPSIG00000012965	FUBP1	99	95.966	Pelodiscus_sinensis
ENSSHAG00000005367	FUBP1	98	73.857	ENSPMGG00000009060	fubp1	66	77.123	Periophthalmus_magnuspinnatus
ENSSHAG00000005367	FUBP1	100	96.945	ENSPEMG00000021802	Fubp1	100	97.945	Peromyscus_maniculatus_bairdii
ENSSHAG00000005367	FUBP1	53	67.949	ENSPMAG00000001644	-	85	61.792	Petromyzon_marinus
ENSSHAG00000005367	FUBP1	99	71.231	ENSPFOG00000000238	fubp1	78	53.659	Poecilia_formosa
ENSSHAG00000005367	FUBP1	99	69.780	ENSPLAG00000021170	fubp1	67	78.910	Poecilia_latipinna
ENSSHAG00000005367	FUBP1	98	75.551	ENSPMEG00000004747	fubp1	68	78.910	Poecilia_mexicana
ENSSHAG00000005367	FUBP1	99	74.444	ENSPREG00000017911	fubp1	63	83.871	Poecilia_reticulata
ENSSHAG00000005367	FUBP1	73	99.189	ENSPPYG00000001219	-	64	97.887	Pongo_abelii
ENSSHAG00000005367	FUBP1	100	97.577	ENSPCAG00000012617	FUBP1	94	97.577	Procavia_capensis
ENSSHAG00000005367	FUBP1	100	98.553	ENSPCOG00000024974	FUBP1	94	97.858	Propithecus_coquereli
ENSSHAG00000005367	FUBP1	100	93.053	ENSPVAG00000014637	FUBP1	94	93.053	Pteropus_vampyrus
ENSSHAG00000005367	FUBP1	99	73.042	ENSPNYG00000004552	fubp1	68	79.187	Pundamilia_nyererei
ENSSHAG00000005367	FUBP1	98	73.868	ENSPNAG00000016207	fubp1	82	77.934	Pygocentrus_nattereri
ENSSHAG00000005367	FUBP1	100	98.018	ENSRNOG00000043370	Fubp1	94	96.885	Rattus_norvegicus
ENSSHAG00000005367	FUBP1	100	98.373	ENSRBIG00000042950	FUBP1	94	97.694	Rhinopithecus_bieti
ENSSHAG00000005367	FUBP1	100	98.373	ENSRROG00000043534	FUBP1	94	97.694	Rhinopithecus_roxellana
ENSSHAG00000005367	FUBP1	100	98.553	ENSSBOG00000027299	FUBP1	98	98.491	Saimiri_boliviensis_boliviensis
ENSSHAG00000005367	FUBP1	99	74.824	ENSSFOG00015010213	fubp1	65	79.048	Scleropages_formosus
ENSSHAG00000005367	FUBP1	99	67.517	ENSSMAG00000012029	fubp1	77	51.149	Scophthalmus_maximus
ENSSHAG00000005367	FUBP1	98	72.678	ENSSDUG00000007383	fubp1	64	76.674	Seriola_dumerili
ENSSHAG00000005367	FUBP1	99	72.777	ENSSLDG00000022863	fubp1	67	76.611	Seriola_lalandi_dorsalis
ENSSHAG00000005367	FUBP1	99	95.745	ENSSARG00000011730	FUBP1	52	97.959	Sorex_araneus
ENSSHAG00000005367	FUBP1	99	93.829	ENSSPUG00000008389	FUBP1	94	85.162	Sphenodon_punctatus
ENSSHAG00000005367	FUBP1	98	74.495	ENSSPAG00000010161	fubp1	64	77.990	Stegastes_partitus
ENSSHAG00000005367	FUBP1	99	96.230	ENSTGUG00000006841	FUBP1	92	96.230	Taeniopygia_guttata
ENSSHAG00000005367	FUBP1	95	73.143	ENSTRUG00000004615	fubp1	60	78.199	Takifugu_rubripes
ENSSHAG00000005367	FUBP1	61	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSSHAG00000005367	FUBP1	87	98.810	ENSTBEG00000017333	FUBP1	67	98.810	Tupaia_belangeri
ENSSHAG00000005367	FUBP1	100	97.900	ENSTTRG00000000096	FUBP1	94	97.900	Tursiops_truncatus
ENSSHAG00000005367	FUBP1	99	98.732	ENSVPAG00000004709	FUBP1	94	97.883	Vicugna_pacos
ENSSHAG00000005367	FUBP1	99	71.612	ENSXCOG00000019354	fubp1	67	77.033	Xiphophorus_couchianus
ENSSHAG00000005367	FUBP1	99	74.532	ENSXMAG00000007168	fubp1	64	83.871	Xiphophorus_maculatus