EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000005422 (Gene tree)
Gene ID: -
Gene Symbol: TRIM39-RPP21
Alias: -
Full Name: TRIM39-RPP21 readthrough
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 12188 bases
Position: chrGL856873.1:157507-169694
Accession: 38845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006229	Rpr2	PF04032.16	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006283	TRIM39-RPP21-201	1206	-	ENSSHAP00000006229	402 (aa)	-	G3VSS4

Gene Model

Click here to download ENSSHAG00000005422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005422	TRIM39-RPP21	100	87.562	ENSG00000248167	TRIM39-RPP21	80	87.562	Homo_sapiens
ENSSHAG00000005422	TRIM39-RPP21	99	87.437	ENSCAFG00020017552	TRIM39-RPP21	79	87.437	Canis_lupus_dingo
ENSSHAG00000005422	TRIM39-RPP21	99	88.693	ENSCANG00000028141	TRIM39-RPP21	79	88.693	Colobus_angolensis_palliatus
ENSSHAG00000005422	TRIM39-RPP21	99	91.459	ENSECAG00000015974	TRIM39-RPP21	69	91.786	Equus_caballus
ENSSHAG00000005422	TRIM39-RPP21	99	86.250	ENSMICG00000004749	TRIM39-RPP21	79	86.250	Microcebus_murinus
ENSSHAG00000005422	TRIM39-RPP21	96	85.271	ENSMLUG00000015705	TRIM39-RPP21	93	85.271	Myotis_lucifugus
ENSSHAG00000005422	TRIM39-RPP21	99	87.437	ENSVVUG00000009510	TRIM39-RPP21	79	87.437	Vulpes_vulpes