EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000005690 (Gene tree)
Gene ID: 100918756
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 26145 bases
Position: chrGL834428.1:175045-201189
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006538	GUCT	PF08152.12	2e-26	1	1
ENSSHAP00000006538	ResIII	PF04851.15	3.3e-09	1	1
ENSSHAP00000006538	DEAD	PF00270.29	4.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006595	DDX50-201	3203	-	ENSSHAP00000006538	720 (aa)	-	G3VTN3

Gene Model

Click here to download ENSSHAG00000005690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000005690	DDX50	94	64.352	ENSSHAG00000005334	-	73	71.661
ENSSHAG00000005690	DDX50	51	30.628	ENSSHAG00000010982	DDX49	68	31.335
ENSSHAG00000005690	DDX50	50	34.140	ENSSHAG00000018781	DDX18	56	34.140
ENSSHAG00000005690	DDX50	51	33.067	ENSSHAG00000011574	-	59	33.067
ENSSHAG00000005690	DDX50	59	30.716	ENSSHAG00000004638	-	90	30.465
ENSSHAG00000005690	DDX50	51	32.267	ENSSHAG00000014005	-	59	32.267
ENSSHAG00000005690	DDX50	50	30.769	ENSSHAG00000011424	DDX6	71	30.769
ENSSHAG00000005690	DDX50	50	35.813	ENSSHAG00000001847	-	55	35.813
ENSSHAG00000005690	DDX50	56	33.174	ENSSHAG00000016933	-	60	35.556
ENSSHAG00000005690	DDX50	51	32.181	ENSSHAG00000015756	EIF4A1	88	32.086
ENSSHAG00000005690	DDX50	53	31.606	ENSSHAG00000005751	-	88	31.510
ENSSHAG00000005690	DDX50	51	34.677	ENSSHAG00000004578	DDX17	56	34.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005690	DDX50	91	81.364	ENSG00000107625	DDX50	88	81.307	Homo_sapiens
ENSSHAG00000005690	DDX50	92	80.873	ENSAMEG00000017992	DDX50	88	80.880	Ailuropoda_melanoleuca
ENSSHAG00000005690	DDX50	91	64.190	ENSANAG00000017785	-	88	64.083	Aotus_nancymaae
ENSSHAG00000005690	DDX50	92	81.297	ENSBTAG00000033413	DDX50	88	81.307	Bos_taurus
ENSSHAG00000005690	DDX50	91	81.212	ENSCJAG00000018844	DDX50	83	86.709	Callithrix_jacchus
ENSSHAG00000005690	DDX50	92	81.024	ENSCAFG00000013776	DDX50	95	81.032	Canis_familiaris
ENSSHAG00000005690	DDX50	92	81.024	ENSCAFG00020025977	DDX50	88	81.032	Canis_lupus_dingo
ENSSHAG00000005690	DDX50	91	81.364	ENSCHIG00000000285	DDX50	88	81.307	Capra_hircus
ENSSHAG00000005690	DDX50	91	80.909	ENSTSYG00000004192	DDX50	83	86.262	Carlito_syrichta
ENSSHAG00000005690	DDX50	90	66.821	ENSCAPG00000007230	-	87	65.741	Cavia_aperea
ENSSHAG00000005690	DDX50	90	81.944	ENSCPOG00000002131	-	88	81.019	Cavia_porcellus
ENSSHAG00000005690	DDX50	83	71.545	ENSCCAG00000030543	DDX50	86	71.690	Cebus_capucinus
ENSSHAG00000005690	DDX50	92	56.306	ENSCATG00000039259	-	80	66.124	Cercocebus_atys
ENSSHAG00000005690	DDX50	95	58.601	ENSCATG00000035153	-	89	78.549	Cercocebus_atys
ENSSHAG00000005690	DDX50	91	81.498	ENSCATG00000032463	DDX50	90	81.098	Cercocebus_atys
ENSSHAG00000005690	DDX50	52	71.505	ENSCLAG00000001553	-	79	77.597	Chinchilla_lanigera
ENSSHAG00000005690	DDX50	98	57.872	ENSCLAG00000001938	-	90	59.660	Chinchilla_lanigera
ENSSHAG00000005690	DDX50	91	81.818	ENSCLAG00000012957	-	88	81.279	Chinchilla_lanigera
ENSSHAG00000005690	DDX50	91	81.212	ENSCSAG00000007703	DDX50	88	81.155	Chlorocebus_sabaeus
ENSSHAG00000005690	DDX50	90	81.595	ENSCHOG00000000233	DDX50	97	81.538	Choloepus_hoffmanni
ENSSHAG00000005690	DDX50	96	54.703	ENSCANG00000028077	-	86	54.378	Colobus_angolensis_palliatus
ENSSHAG00000005690	DDX50	91	67.121	ENSCANG00000036450	-	88	67.325	Colobus_angolensis_palliatus
ENSSHAG00000005690	DDX50	87	61.502	ENSCANG00000018820	-	84	65.036	Colobus_angolensis_palliatus
ENSSHAG00000005690	DDX50	91	80.851	ENSCGRG00001020223	Ddx50	88	80.488	Cricetulus_griseus_chok1gshd
ENSSHAG00000005690	DDX50	91	80.916	ENSCGRG00000015884	Ddx50	88	80.488	Cricetulus_griseus_crigri
ENSSHAG00000005690	DDX50	85	77.850	ENSDNOG00000001675	DDX50	96	77.331	Dasypus_novemcinctus
ENSSHAG00000005690	DDX50	91	80.909	ENSDORG00000007310	Ddx50	88	80.851	Dipodomys_ordii
ENSSHAG00000005690	DDX50	81	86.768	ENSETEG00000014069	DDX50	79	86.701	Echinops_telfairi
ENSSHAG00000005690	DDX50	92	80.995	ENSEASG00005015595	DDX50	88	81.003	Equus_asinus_asinus
ENSSHAG00000005690	DDX50	92	81.146	ENSECAG00000023044	DDX50	88	81.155	Equus_caballus
ENSSHAG00000005690	DDX50	83	83.250	ENSEEUG00000005782	DDX50	75	87.342	Erinaceus_europaeus
ENSSHAG00000005690	DDX50	91	81.241	ENSFCAG00000012678	DDX50	88	81.184	Felis_catus
ENSSHAG00000005690	DDX50	91	76.061	ENSFDAG00000016109	-	88	75.988	Fukomys_damarensis
ENSSHAG00000005690	DDX50	50	68.120	ENSGGOG00000041063	-	81	73.502	Gorilla_gorilla
ENSSHAG00000005690	DDX50	91	81.364	ENSGGOG00000010100	DDX50	83	87.220	Gorilla_gorilla
ENSSHAG00000005690	DDX50	90	81.595	ENSHGLG00000013466	DDX50	88	81.538	Heterocephalus_glaber_female
ENSSHAG00000005690	DDX50	90	81.595	ENSHGLG00100017191	DDX50	88	81.538	Heterocephalus_glaber_male
ENSSHAG00000005690	DDX50	81	72.872	ENSHGLG00100006568	-	89	72.581	Heterocephalus_glaber_male
ENSSHAG00000005690	DDX50	90	80.000	ENSSTOG00000021852	-	88	80.092	Ictidomys_tridecemlineatus
ENSSHAG00000005690	DDX50	90	80.431	ENSJJAG00000023928	-	88	80.371	Jaculus_jaculus
ENSSHAG00000005690	DDX50	98	59.410	ENSJJAG00000019626	-	89	61.069	Jaculus_jaculus
ENSSHAG00000005690	DDX50	91	81.212	ENSLAFG00000006186	DDX50	89	81.155	Loxodonta_africana
ENSSHAG00000005690	DDX50	91	81.212	ENSMFAG00000044067	DDX50	88	81.155	Macaca_fascicularis
ENSSHAG00000005690	DDX50	95	59.942	ENSMFAG00000045339	-	88	77.918	Macaca_fascicularis
ENSSHAG00000005690	DDX50	91	81.212	ENSMMUG00000001006	DDX50	90	83.770	Macaca_mulatta
ENSSHAG00000005690	DDX50	81	59.897	ENSMMUG00000045343	-	74	60.870	Macaca_mulatta
ENSSHAG00000005690	DDX50	95	60.553	ENSMNEG00000045530	-	89	78.549	Macaca_nemestrina
ENSSHAG00000005690	DDX50	91	74.735	ENSMNEG00000031664	DDX50	88	74.659	Macaca_nemestrina
ENSSHAG00000005690	DDX50	95	57.496	ENSMLEG00000041988	-	87	77.287	Mandrillus_leucophaeus
ENSSHAG00000005690	DDX50	91	79.697	ENSMLEG00000037313	DDX50	88	79.483	Mandrillus_leucophaeus
ENSSHAG00000005690	DDX50	55	76.336	ENSMAUG00000022192	Ddx50	94	75.888	Mesocricetus_auratus
ENSSHAG00000005690	DDX50	91	74.471	ENSMICG00000017539	DDX50	84	79.530	Microcebus_murinus
ENSSHAG00000005690	DDX50	91	80.606	ENSMOCG00000001676	Ddx50	88	79.939	Microtus_ochrogaster
ENSSHAG00000005690	DDX50	99	95.670	ENSMODG00000010741	DDX50	96	95.670	Monodelphis_domestica
ENSSHAG00000005690	DDX50	91	80.243	MGP_CAROLIEiJ_G0015389	Ddx50	88	80.305	Mus_caroli
ENSSHAG00000005690	DDX50	91	80.395	ENSMUSG00000020076	Ddx50	88	80.458	Mus_musculus
ENSSHAG00000005690	DDX50	91	80.395	MGP_PahariEiJ_G0030805	Ddx50	88	80.458	Mus_pahari
ENSSHAG00000005690	DDX50	91	80.395	MGP_SPRETEiJ_G0016200	Ddx50	88	80.458	Mus_spretus
ENSSHAG00000005690	DDX50	87	81.429	ENSMPUG00000004589	DDX50	96	81.429	Mustela_putorius_furo
ENSSHAG00000005690	DDX50	91	80.000	ENSMLUG00000017590	DDX50	89	79.939	Myotis_lucifugus
ENSSHAG00000005690	DDX50	90	81.595	ENSNGAG00000004283	Ddx50	88	81.327	Nannospalax_galili
ENSSHAG00000005690	DDX50	91	81.212	ENSNLEG00000011631	DDX50	88	81.155	Nomascus_leucogenys
ENSSHAG00000005690	DDX50	87	60.606	ENSNLEG00000035506	-	87	69.085	Nomascus_leucogenys
ENSSHAG00000005690	DDX50	91	79.331	ENSOPRG00000001619	DDX50	88	79.268	Ochotona_princeps
ENSSHAG00000005690	DDX50	91	81.515	ENSODEG00000014597	-	88	80.974	Octodon_degus
ENSSHAG00000005690	DDX50	95	67.779	ENSOANG00000004776	DDX50	83	67.584	Ornithorhynchus_anatinus
ENSSHAG00000005690	DDX50	97	78.205	ENSOCUG00000002879	DDX50	91	80.245	Oryctolagus_cuniculus
ENSSHAG00000005690	DDX50	91	80.758	ENSOGAG00000001844	DDX50	88	80.699	Otolemur_garnettii
ENSSHAG00000005690	DDX50	91	81.667	ENSOARG00000005264	DDX50	88	81.611	Ovis_aries
ENSSHAG00000005690	DDX50	91	81.364	ENSPPAG00000040723	DDX50	88	81.307	Pan_paniscus
ENSSHAG00000005690	DDX50	50	68.681	ENSPPAG00000033902	-	86	72.555	Pan_paniscus
ENSSHAG00000005690	DDX50	91	81.241	ENSPPRG00000015826	DDX50	88	81.184	Panthera_pardus
ENSSHAG00000005690	DDX50	91	81.241	ENSPTIG00000008454	DDX50	88	81.184	Panthera_tigris_altaica
ENSSHAG00000005690	DDX50	91	81.364	ENSPTRG00000002562	DDX50	88	81.307	Pan_troglodytes
ENSSHAG00000005690	DDX50	91	74.545	ENSPANG00000022143	-	88	74.468	Papio_anubis
ENSSHAG00000005690	DDX50	91	80.152	ENSPEMG00000020899	-	88	79.756	Peromyscus_maniculatus_bairdii
ENSSHAG00000005690	DDX50	99	93.530	ENSPCIG00000016036	DDX50	92	96.914	Phascolarctos_cinereus
ENSSHAG00000005690	DDX50	85	83.902	ENSPPYG00000002390	DDX50	90	83.770	Pongo_abelii
ENSSHAG00000005690	DDX50	86	68.659	ENSPCAG00000009692	DDX50	100	68.608	Procavia_capensis
ENSSHAG00000005690	DDX50	65	73.978	ENSPCOG00000012574	DDX50	71	74.514	Propithecus_coquereli
ENSSHAG00000005690	DDX50	81	75.652	ENSPVAG00000009519	DDX50	74	75.652	Pteropus_vampyrus
ENSSHAG00000005690	DDX50	91	79.787	ENSRNOG00000000396	Ddx50	82	87.500	Rattus_norvegicus
ENSSHAG00000005690	DDX50	89	59.317	ENSRBIG00000036573	-	81	67.097	Rhinopithecus_bieti
ENSSHAG00000005690	DDX50	87	81.051	ENSRBIG00000042841	-	98	83.793	Rhinopithecus_bieti
ENSSHAG00000005690	DDX50	96	54.113	ENSRBIG00000039673	-	84	53.385	Rhinopithecus_bieti
ENSSHAG00000005690	DDX50	85	58.333	ENSRROG00000022853	-	82	62.338	Rhinopithecus_roxellana
ENSSHAG00000005690	DDX50	91	81.212	ENSRROG00000032158	DDX50	90	83.770	Rhinopithecus_roxellana
ENSSHAG00000005690	DDX50	91	70.455	ENSSBOG00000014441	DDX50	95	71.405	Saimiri_boliviensis_boliviensis
ENSSHAG00000005690	DDX50	87	73.844	ENSSARG00000013553	DDX50	84	73.844	Sorex_araneus
ENSSHAG00000005690	DDX50	96	79.053	ENSSSCG00000010246	DDX50	88	81.003	Sus_scrofa
ENSSHAG00000005690	DDX50	91	60.395	ENSTBEG00000001085	DDX50	88	59.970	Tupaia_belangeri
ENSSHAG00000005690	DDX50	91	74.394	ENSTTRG00000012408	DDX50	88	74.316	Tursiops_truncatus
ENSSHAG00000005690	DDX50	92	81.024	ENSUAMG00000010976	DDX50	89	88.381	Ursus_americanus
ENSSHAG00000005690	DDX50	92	81.024	ENSUMAG00000007726	DDX50	88	81.032	Ursus_maritimus
ENSSHAG00000005690	DDX50	90	82.362	ENSVPAG00000000626	DDX50	88	82.000	Vicugna_pacos
ENSSHAG00000005690	DDX50	84	77.025	ENSVVUG00000020366	DDX50	94	80.776	Vulpes_vulpes