EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000005886 (Gene tree)
Gene ID: 100924063
Gene Symbol: -
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 18135 bases
Position: chrGL864737.1:187934-206068
Accession: 100924063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006771	FRG1	PF06229.12	8.8e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006830	-	2340	-	ENSSHAP00000006771	258 (aa)	XP_003772854	G3VUB6

Gene Model

Click here to download ENSSHAG00000005886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000005886	-	100	91.085	ENSG00000109536	FRG1	100	93.966	Homo_sapiens
ENSSHAG00000005886	-	100	72.093	ENSAPOG00000001060	frg1	100	72.093	Acanthochromis_polyacanthus
ENSSHAG00000005886	-	100	91.860	ENSAMEG00000013503	FRG1	100	91.860	Ailuropoda_melanoleuca
ENSSHAG00000005886	-	86	74.888	ENSACIG00000022283	frg1	98	75.342	Amphilophus_citrinellus
ENSSHAG00000005886	-	86	74.439	ENSAOCG00000024240	frg1	85	74.886	Amphiprion_ocellaris
ENSSHAG00000005886	-	100	71.318	ENSAPEG00000002486	frg1	100	71.318	Amphiprion_percula
ENSSHAG00000005886	-	100	71.318	ENSATEG00000010414	frg1	100	71.705	Anabas_testudineus
ENSSHAG00000005886	-	100	84.496	ENSAPLG00000007785	-	100	84.496	Anas_platyrhynchos
ENSSHAG00000005886	-	100	80.233	ENSACAG00000006877	-	100	78.295	Anolis_carolinensis
ENSSHAG00000005886	-	100	89.535	ENSANAG00000020876	FRG1	100	89.535	Aotus_nancymaae
ENSSHAG00000005886	-	100	67.433	ENSACLG00000027065	frg1	100	67.829	Astatotilapia_calliptera
ENSSHAG00000005886	-	100	72.481	ENSAMXG00000032700	frg1	100	71.705	Astyanax_mexicanus
ENSSHAG00000005886	-	100	91.860	ENSBTAG00000007089	FRG1	100	91.860	Bos_taurus
ENSSHAG00000005886	-	99	39.927	WBGene00014177	frg-1	82	41.667	Caenorhabditis_elegans
ENSSHAG00000005886	-	100	89.535	ENSCJAG00000011272	FRG1	100	89.535	Callithrix_jacchus
ENSSHAG00000005886	-	100	91.860	ENSCAFG00000007135	FRG1	100	91.860	Canis_familiaris
ENSSHAG00000005886	-	82	93.868	ENSCAFG00020000082	-	85	93.868	Canis_lupus_dingo
ENSSHAG00000005886	-	100	91.860	ENSCHIG00000011585	-	100	91.860	Capra_hircus
ENSSHAG00000005886	-	98	66.142	ENSTSYG00000031599	-	100	65.748	Carlito_syrichta
ENSSHAG00000005886	-	88	91.228	ENSCAPG00000016056	-	89	92.694	Cavia_aperea
ENSSHAG00000005886	-	100	88.760	ENSCPOG00000022277	-	100	88.760	Cavia_porcellus
ENSSHAG00000005886	-	100	89.535	ENSCCAG00000024627	FRG1	100	89.535	Cebus_capucinus
ENSSHAG00000005886	-	100	91.473	ENSCATG00000029230	FRG1	100	91.473	Cercocebus_atys
ENSSHAG00000005886	-	100	60.853	ENSCLAG00000006068	-	100	60.078	Chinchilla_lanigera
ENSSHAG00000005886	-	100	76.744	ENSCLAG00000004960	-	100	76.744	Chinchilla_lanigera
ENSSHAG00000005886	-	100	88.760	ENSCLAG00000000370	-	100	89.147	Chinchilla_lanigera
ENSSHAG00000005886	-	99	61.961	ENSCLAG00000009263	-	100	61.961	Chinchilla_lanigera
ENSSHAG00000005886	-	83	87.907	ENSCSAG00000017729	-	99	87.907	Chlorocebus_sabaeus
ENSSHAG00000005886	-	100	91.473	ENSCSAG00000002899	FRG1	100	91.473	Chlorocebus_sabaeus
ENSSHAG00000005886	-	87	87.111	ENSCPBG00000009211	-	85	88.128	Chrysemys_picta_bellii
ENSSHAG00000005886	-	99	51.493	ENSCING00000005161	-	99	51.493	Ciona_intestinalis
ENSSHAG00000005886	-	51	55.303	ENSCSAVG00000008018	-	100	49.457	Ciona_savignyi
ENSSHAG00000005886	-	100	91.473	ENSCANG00000020991	FRG1	100	91.473	Colobus_angolensis_palliatus
ENSSHAG00000005886	-	100	90.698	ENSCGRG00001014998	Frg1	100	90.698	Cricetulus_griseus_chok1gshd
ENSSHAG00000005886	-	100	90.698	ENSCGRG00000011860	-	100	90.698	Cricetulus_griseus_crigri
ENSSHAG00000005886	-	100	70.543	ENSCGRG00000003902	-	96	70.543	Cricetulus_griseus_crigri
ENSSHAG00000005886	-	96	67.611	ENSCSEG00000015950	frg1	100	67.611	Cynoglossus_semilaevis
ENSSHAG00000005886	-	100	69.380	ENSCVAG00000009985	frg1	100	69.380	Cyprinodon_variegatus
ENSSHAG00000005886	-	100	71.705	ENSDARG00000056504	frg1	93	79.259	Danio_rerio
ENSSHAG00000005886	-	100	91.085	ENSDNOG00000014886	FRG1	100	91.085	Dasypus_novemcinctus
ENSSHAG00000005886	-	100	79.457	ENSDORG00000016190	Frg1	100	79.457	Dipodomys_ordii
ENSSHAG00000005886	-	83	50.233	FBgn0036964	FRG1	100	47.348	Drosophila_melanogaster
ENSSHAG00000005886	-	100	89.147	ENSETEG00000012349	-	100	89.147	Echinops_telfairi
ENSSHAG00000005886	-	57	51.351	ENSEBUG00000012359	FRG1	89	51.351	Eptatretus_burgeri
ENSSHAG00000005886	-	100	87.597	ENSEASG00005017497	FRG1	100	89.535	Equus_asinus_asinus
ENSSHAG00000005886	-	100	87.597	ENSECAG00000003122	FRG1	100	89.535	Equus_caballus
ENSSHAG00000005886	-	61	93.631	ENSEEUG00000000145	-	100	93.631	Erinaceus_europaeus
ENSSHAG00000005886	-	100	70.155	ENSELUG00000021712	frg1	100	69.767	Esox_lucius
ENSSHAG00000005886	-	100	91.860	ENSFCAG00000025737	FRG1	100	91.860	Felis_catus
ENSSHAG00000005886	-	85	86.758	ENSFALG00000011231	-	85	86.758	Ficedula_albicollis
ENSSHAG00000005886	-	100	79.231	ENSFDAG00000012697	-	98	82.326	Fukomys_damarensis
ENSSHAG00000005886	-	100	88.760	ENSFDAG00000000962	-	100	88.372	Fukomys_damarensis
ENSSHAG00000005886	-	100	68.992	ENSFHEG00000010540	frg1	100	69.380	Fundulus_heteroclitus
ENSSHAG00000005886	-	100	67.829	ENSGMOG00000000867	frg1	100	67.829	Gadus_morhua
ENSSHAG00000005886	-	100	84.109	ENSGALG00000013590	-	100	84.109	Gallus_gallus
ENSSHAG00000005886	-	81	66.190	ENSGAFG00000013855	frg1	100	66.190	Gambusia_affinis
ENSSHAG00000005886	-	100	70.155	ENSGACG00000016888	frg1	100	70.155	Gasterosteus_aculeatus
ENSSHAG00000005886	-	100	84.109	ENSGAGG00000025012	-	100	83.721	Gopherus_agassizii
ENSSHAG00000005886	-	69	81.461	ENSGGOG00000012888	-	90	81.461	Gorilla_gorilla
ENSSHAG00000005886	-	100	61.628	ENSGGOG00000040796	-	100	61.628	Gorilla_gorilla
ENSSHAG00000005886	-	100	71.705	ENSHBUG00000010667	frg1	100	71.318	Haplochromis_burtoni
ENSSHAG00000005886	-	99	84.436	ENSHGLG00000020943	-	99	82.879	Heterocephalus_glaber_female
ENSSHAG00000005886	-	100	74.419	ENSHGLG00000001211	-	100	74.419	Heterocephalus_glaber_female
ENSSHAG00000005886	-	100	90.310	ENSHGLG00000005601	FRG1	100	88.760	Heterocephalus_glaber_female
ENSSHAG00000005886	-	99	86.381	ENSHGLG00000020402	-	94	84.825	Heterocephalus_glaber_female
ENSSHAG00000005886	-	100	74.806	ENSHGLG00100010674	-	100	74.806	Heterocephalus_glaber_male
ENSSHAG00000005886	-	100	70.155	ENSHGLG00100015285	-	100	70.155	Heterocephalus_glaber_male
ENSSHAG00000005886	-	100	89.922	ENSHGLG00100016261	-	100	88.372	Heterocephalus_glaber_male
ENSSHAG00000005886	-	99	84.436	ENSHGLG00100021211	-	99	82.879	Heterocephalus_glaber_male
ENSSHAG00000005886	-	86	72.646	ENSHCOG00000000224	frg1	93	73.516	Hippocampus_comes
ENSSHAG00000005886	-	100	75.969	ENSIPUG00000022716	frg1	100	75.969	Ictalurus_punctatus
ENSSHAG00000005886	-	100	90.310	ENSSTOG00000002857	-	100	90.310	Ictidomys_tridecemlineatus
ENSSHAG00000005886	-	100	91.473	ENSJJAG00000020625	Frg1	100	91.473	Jaculus_jaculus
ENSSHAG00000005886	-	100	67.829	ENSKMAG00000005841	frg1	100	68.605	Kryptolebias_marmoratus
ENSSHAG00000005886	-	100	68.992	ENSLBEG00000001466	frg1	100	68.992	Labrus_bergylta
ENSSHAG00000005886	-	100	70.229	ENSLACG00000010243	frg1	100	70.229	Latimeria_chalumnae
ENSSHAG00000005886	-	100	73.643	ENSLOCG00000013868	frg1	100	73.643	Lepisosteus_oculatus
ENSSHAG00000005886	-	100	90.310	ENSLAFG00000011191	FRG1	100	90.310	Loxodonta_africana
ENSSHAG00000005886	-	82	83.178	ENSMFAG00000042873	-	89	83.178	Macaca_fascicularis
ENSSHAG00000005886	-	100	91.473	ENSMFAG00000031178	FRG1	100	91.473	Macaca_fascicularis
ENSSHAG00000005886	-	100	91.473	ENSMMUG00000001824	FRG1	100	91.473	Macaca_mulatta
ENSSHAG00000005886	-	78	83.251	ENSMMUG00000047496	-	87	83.251	Macaca_mulatta
ENSSHAG00000005886	-	96	85.425	ENSMNEG00000018620	FRG1	100	85.425	Macaca_nemestrina
ENSSHAG00000005886	-	100	91.473	ENSMLEG00000028881	FRG1	100	91.473	Mandrillus_leucophaeus
ENSSHAG00000005886	-	100	70.543	ENSMAMG00000012406	frg1	100	70.543	Mastacembelus_armatus
ENSSHAG00000005886	-	100	71.318	ENSMZEG00005007549	frg1	100	70.930	Maylandia_zebra
ENSSHAG00000005886	-	100	83.721	ENSMGAG00000011481	-	100	84.109	Meleagris_gallopavo
ENSSHAG00000005886	-	100	91.085	ENSMAUG00000000847	Frg1	100	91.085	Mesocricetus_auratus
ENSSHAG00000005886	-	100	91.473	ENSMICG00000046816	FRG1	100	91.473	Microcebus_murinus
ENSSHAG00000005886	-	100	84.496	ENSMOCG00000023000	Frg1	100	84.496	Microtus_ochrogaster
ENSSHAG00000005886	-	86	72.523	ENSMMOG00000004008	frg1	93	72.603	Mola_mola
ENSSHAG00000005886	-	100	96.512	ENSMODG00000019031	-	87	96.512	Monodelphis_domestica
ENSSHAG00000005886	-	100	70.543	ENSMALG00000018497	frg1	100	70.543	Monopterus_albus
ENSSHAG00000005886	-	100	90.698	MGP_CAROLIEiJ_G0031006	Frg1	100	90.698	Mus_caroli
ENSSHAG00000005886	-	100	90.698	ENSMUSG00000031590	Frg1	100	90.698	Mus_musculus
ENSSHAG00000005886	-	100	90.310	MGP_PahariEiJ_G0021475	Frg1	100	90.310	Mus_pahari
ENSSHAG00000005886	-	100	90.310	MGP_SPRETEiJ_G0032120	Frg1	100	90.310	Mus_spretus
ENSSHAG00000005886	-	100	91.860	ENSMPUG00000017962	FRG1	100	91.860	Mustela_putorius_furo
ENSSHAG00000005886	-	100	89.147	ENSMLUG00000023179	FRG1	100	89.147	Myotis_lucifugus
ENSSHAG00000005886	-	100	91.085	ENSNGAG00000016411	Frg1	100	91.085	Nannospalax_galili
ENSSHAG00000005886	-	81	67.619	ENSNBRG00000006806	frg1	95	67.619	Neolamprologus_brichardi
ENSSHAG00000005886	-	100	75.385	ENSNLEG00000032333	-	100	75.000	Nomascus_leucogenys
ENSSHAG00000005886	-	78	82.587	ENSNLEG00000028874	-	91	82.587	Nomascus_leucogenys
ENSSHAG00000005886	-	78	83.582	ENSNLEG00000036059	-	86	83.582	Nomascus_leucogenys
ENSSHAG00000005886	-	100	87.209	ENSNLEG00000000930	FRG1	100	88.372	Nomascus_leucogenys
ENSSHAG00000005886	-	100	61.240	ENSNLEG00000032846	-	100	85.714	Nomascus_leucogenys
ENSSHAG00000005886	-	100	79.771	ENSNLEG00000035849	-	100	79.771	Nomascus_leucogenys
ENSSHAG00000005886	-	59	96.053	ENSMEUG00000007509	-	59	96.053	Notamacropus_eugenii
ENSSHAG00000005886	-	100	77.907	ENSOPRG00000004722	-	100	77.907	Ochotona_princeps
ENSSHAG00000005886	-	100	88.760	ENSODEG00000006458	-	100	89.147	Octodon_degus
ENSSHAG00000005886	-	100	69.380	ENSODEG00000006953	-	100	69.380	Octodon_degus
ENSSHAG00000005886	-	100	71.042	ENSONIG00000010162	frg1	100	70.656	Oreochromis_niloticus
ENSSHAG00000005886	-	67	90.698	ENSOANG00000005659	-	76	90.698	Ornithorhynchus_anatinus
ENSSHAG00000005886	-	100	91.473	ENSOCUG00000009038	-	100	91.473	Oryctolagus_cuniculus
ENSSHAG00000005886	-	96	68.016	ENSORLG00000008106	frg1	89	68.016	Oryzias_latipes
ENSSHAG00000005886	-	100	68.605	ENSORLG00020014355	frg1	100	68.605	Oryzias_latipes_hni
ENSSHAG00000005886	-	100	68.605	ENSORLG00015014159	frg1	100	68.605	Oryzias_latipes_hsok
ENSSHAG00000005886	-	84	67.281	ENSOMEG00000002468	frg1	88	67.281	Oryzias_melastigma
ENSSHAG00000005886	-	100	89.922	ENSOGAG00000005749	-	100	89.922	Otolemur_garnettii
ENSSHAG00000005886	-	100	89.272	ENSOARG00000008592	FRG1	100	89.272	Ovis_aries
ENSSHAG00000005886	-	96	65.504	ENSPPAG00000043174	-	100	65.504	Pan_paniscus
ENSSHAG00000005886	-	84	90.278	ENSPPAG00000043170	-	100	90.278	Pan_paniscus
ENSSHAG00000005886	-	100	91.473	ENSPPRG00000025003	-	100	91.473	Panthera_pardus
ENSSHAG00000005886	-	100	87.597	ENSPPRG00000019777	-	100	87.597	Panthera_pardus
ENSSHAG00000005886	-	100	87.984	ENSPTIG00000006566	-	100	87.984	Panthera_tigris_altaica
ENSSHAG00000005886	-	100	91.085	ENSPTIG00000006588	-	100	91.085	Panthera_tigris_altaica
ENSSHAG00000005886	-	95	71.429	ENSPTRG00000052363	-	94	90.099	Pan_troglodytes
ENSSHAG00000005886	-	100	91.085	ENSPTRG00000016671	-	100	91.085	Pan_troglodytes
ENSSHAG00000005886	-	89	77.056	ENSPTRG00000043123	-	94	76.824	Pan_troglodytes
ENSSHAG00000005886	-	96	71.084	ENSPTRG00000050204	-	100	71.084	Pan_troglodytes
ENSSHAG00000005886	-	100	91.085	ENSPTRG00000050205	-	100	91.085	Pan_troglodytes
ENSSHAG00000005886	-	96	71.888	ENSPTRG00000044710	-	100	71.888	Pan_troglodytes
ENSSHAG00000005886	-	70	82.778	ENSPANG00000031530	-	84	82.778	Papio_anubis
ENSSHAG00000005886	-	100	67.054	ENSPKIG00000024189	frg1	100	70.543	Paramormyrops_kingsleyae
ENSSHAG00000005886	-	83	87.907	ENSPSIG00000017971	-	82	87.907	Pelodiscus_sinensis
ENSSHAG00000005886	-	96	68.826	ENSPMGG00000019273	frg1	100	67.460	Periophthalmus_magnuspinnatus
ENSSHAG00000005886	-	100	90.698	ENSPEMG00000000650	Frg1	100	90.698	Peromyscus_maniculatus_bairdii
ENSSHAG00000005886	-	100	95.349	ENSPCIG00000007530	-	69	95.349	Phascolarctos_cinereus
ENSSHAG00000005886	-	100	69.884	ENSPFOG00000006721	frg1	100	69.884	Poecilia_formosa
ENSSHAG00000005886	-	100	68.217	ENSPMEG00000013816	frg1	100	68.217	Poecilia_mexicana
ENSSHAG00000005886	-	100	67.829	ENSPREG00000000097	frg1	100	67.829	Poecilia_reticulata
ENSSHAG00000005886	-	56	93.103	ENSPPYG00000029810	-	100	93.103	Pongo_abelii
ENSSHAG00000005886	-	61	86.709	ENSPPYG00000011275	-	87	86.709	Pongo_abelii
ENSSHAG00000005886	-	95	88.618	ENSPCAG00000014953	-	100	88.618	Procavia_capensis
ENSSHAG00000005886	-	79	74.877	ENSPCOG00000022726	FRG1	94	74.877	Propithecus_coquereli
ENSSHAG00000005886	-	100	76.357	ENSPVAG00000010551	FRG1	100	76.357	Pteropus_vampyrus
ENSSHAG00000005886	-	67	75.581	ENSPNYG00000015209	frg1	74	75.581	Pundamilia_nyererei
ENSSHAG00000005886	-	100	71.318	ENSPNAG00000013259	frg1	100	71.318	Pygocentrus_nattereri
ENSSHAG00000005886	-	100	89.535	ENSRNOG00000009846	Frg1	100	89.535	Rattus_norvegicus
ENSSHAG00000005886	-	87	91.556	ENSRBIG00000042219	-	94	91.556	Rhinopithecus_bieti
ENSSHAG00000005886	-	100	88.372	ENSRROG00000015523	FRG1	100	88.372	Rhinopithecus_roxellana
ENSSHAG00000005886	-	82	86.730	ENSRROG00000032084	-	94	84.615	Rhinopithecus_roxellana
ENSSHAG00000005886	-	100	88.760	ENSSBOG00000034175	FRG1	100	88.760	Saimiri_boliviensis_boliviensis
ENSSHAG00000005886	-	97	70.800	ENSSFOG00015021361	frg1	99	73.600	Scleropages_formosus
ENSSHAG00000005886	-	100	67.829	ENSSMAG00000001213	frg1	100	67.829	Scophthalmus_maximus
ENSSHAG00000005886	-	100	69.767	ENSSDUG00000018886	frg1	100	69.767	Seriola_dumerili
ENSSHAG00000005886	-	100	68.992	ENSSLDG00000024191	frg1	100	68.992	Seriola_lalandi_dorsalis
ENSSHAG00000005886	-	66	91.228	ENSSARG00000002471	-	90	91.765	Sorex_araneus
ENSSHAG00000005886	-	100	77.132	ENSSPUG00000017326	-	99	78.241	Sphenodon_punctatus
ENSSHAG00000005886	-	100	67.442	ENSSPAG00000013294	frg1	100	67.054	Stegastes_partitus
ENSSHAG00000005886	-	100	91.473	ENSSSCG00000006996	FRG1	100	91.473	Sus_scrofa
ENSSHAG00000005886	-	100	82.171	ENSTGUG00000007028	-	100	82.171	Taeniopygia_guttata
ENSSHAG00000005886	-	100	69.380	ENSTRUG00000016208	frg1	100	68.605	Takifugu_rubripes
ENSSHAG00000005886	-	100	69.380	ENSTNIG00000007128	frg1	100	70.155	Tetraodon_nigroviridis
ENSSHAG00000005886	-	82	65.094	ENSTBEG00000012789	-	99	65.094	Tupaia_belangeri
ENSSHAG00000005886	-	77	58.794	ENSTBEG00000017605	-	99	58.794	Tupaia_belangeri
ENSSHAG00000005886	-	100	90.698	ENSTBEG00000014491	-	100	90.698	Tupaia_belangeri
ENSSHAG00000005886	-	100	91.473	ENSTTRG00000003429	FRG1	100	91.473	Tursiops_truncatus
ENSSHAG00000005886	-	96	84.615	ENSUAMG00000012123	-	100	84.615	Ursus_americanus
ENSSHAG00000005886	-	100	91.860	ENSUMAG00000021119	FRG1	100	91.860	Ursus_maritimus
ENSSHAG00000005886	-	87	91.556	ENSVPAG00000011977	-	92	92.694	Vicugna_pacos
ENSSHAG00000005886	-	100	88.760	ENSVPAG00000000616	FRG1	100	88.760	Vicugna_pacos
ENSSHAG00000005886	-	82	93.868	ENSVVUG00000007181	-	77	93.868	Vulpes_vulpes
ENSSHAG00000005886	-	100	78.295	ENSXETG00000012470	frg1	100	77.132	Xenopus_tropicalis
ENSSHAG00000005886	-	100	65.637	ENSXCOG00000005312	frg1	100	65.504	Xiphophorus_couchianus
ENSSHAG00000005886	-	100	67.442	ENSXMAG00000007751	frg1	100	67.442	Xiphophorus_maculatus