EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSSHAG00000005922 (Gene tree)
Gene ID: 100931336
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 8834 bases
Position: chrGL861666.1:190673-199506
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006816	zf-C2H2	PF00096.26	1.5e-32	1	6
ENSSHAP00000006816	zf-C2H2	PF00096.26	1.5e-32	2	6
ENSSHAP00000006816	zf-C2H2	PF00096.26	1.5e-32	3	6
ENSSHAP00000006816	zf-C2H2	PF00096.26	1.5e-32	4	6
ENSSHAP00000006816	zf-C2H2	PF00096.26	1.5e-32	5	6
ENSSHAP00000006816	zf-C2H2	PF00096.26	1.5e-32	6	6
ENSSHAP00000006816	zf-met	PF12874.7	7.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006875	-	1267	-	ENSSHAP00000006816	367 (aa)	-	G3VUG1

Gene Model

Click here to download ENSSHAG00000005922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000005922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000005922	-	54	37.333	ENSSHAG00000016965	GTF3A	82	37.333
ENSSHAG00000005922	-	75	50.898	ENSSHAG00000011906	-	87	51.205
ENSSHAG00000005922	-	52	39.048	ENSSHAG00000018217	ZNF521	53	38.889
ENSSHAG00000005922	-	60	53.216	ENSSHAG00000003284	-	84	53.614
ENSSHAG00000005922	-	75	46.809	ENSSHAG00000011714	-	61	49.689
ENSSHAG00000005922	-	58	50.575	ENSSHAG00000011347	ZNF668	82	47.518
ENSSHAG00000005922	-	57	36.111	ENSSHAG00000004205	SNAI2	75	36.111
ENSSHAG00000005922	-	50	47.904	ENSSHAG00000003090	-	84	48.193
ENSSHAG00000005922	-	59	41.071	ENSSHAG00000009882	ZBTB16	97	45.588
ENSSHAG00000005922	-	50	34.831	ENSSHAG00000002844	-	64	35.057
ENSSHAG00000005922	-	50	49.704	ENSSHAG00000008255	ZNF768	64	48.795
ENSSHAG00000005922	-	54	43.195	ENSSHAG00000016096	-	96	38.281
ENSSHAG00000005922	-	51	40.000	ENSSHAG00000011486	-	99	39.683
ENSSHAG00000005922	-	52	53.571	ENSSHAG00000014216	-	83	53.614