EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006029 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1092 bases
Position: chrGL842038.1:199317-200408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000006937	PRP38	PF03371.15	1.7e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000006998	-	903	-	ENSSHAP00000006937	300 (aa)	-	G3VUT2

Gene Model

Click here to download ENSSHAG00000006029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006029	-	60	76.667	ENSSHAG00000006906	-	96	66.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006029	-	74	81.900	ENSG00000134748	PRPF38A	96	71.053	Homo_sapiens
ENSSHAG00000006029	-	74	75.566	ENSAPOG00000011652	prpf38a	96	65.552	Acanthochromis_polyacanthus
ENSSHAG00000006029	-	74	81.900	ENSAMEG00000009319	PRPF38A	96	71.053	Ailuropoda_melanoleuca
ENSSHAG00000006029	-	74	75.566	ENSACIG00000012292	prpf38a	81	71.545	Amphilophus_citrinellus
ENSSHAG00000006029	-	74	75.566	ENSAOCG00000018004	prpf38a	96	65.552	Amphiprion_ocellaris
ENSSHAG00000006029	-	74	75.566	ENSAPEG00000021414	prpf38a	96	65.552	Amphiprion_percula
ENSSHAG00000006029	-	62	83.957	ENSATEG00000004608	prpf38a	96	67.224	Anabas_testudineus
ENSSHAG00000006029	-	52	77.564	ENSAPLG00000005827	PRPF38A	95	65.401	Anas_platyrhynchos
ENSSHAG00000006029	-	74	79.638	ENSACAG00000008249	PRPF38A	96	69.536	Anolis_carolinensis
ENSSHAG00000006029	-	74	81.900	ENSANAG00000027839	PRPF38A	96	71.053	Aotus_nancymaae
ENSSHAG00000006029	-	74	54.667	ENSANAG00000029204	-	96	47.213	Aotus_nancymaae
ENSSHAG00000006029	-	74	75.566	ENSACLG00000021595	prpf38a	96	65.552	Astatotilapia_calliptera
ENSSHAG00000006029	-	74	76.471	ENSAMXG00000029274	prpf38a	77	73.333	Astyanax_mexicanus
ENSSHAG00000006029	-	74	81.900	ENSBTAG00000002720	PRPF38A	96	71.053	Bos_taurus
ENSSHAG00000006029	-	65	61.026	WBGene00008380	prp-38	55	65.537	Caenorhabditis_elegans
ENSSHAG00000006029	-	74	81.900	ENSCJAG00000021594	PRPF38A	96	71.053	Callithrix_jacchus
ENSSHAG00000006029	-	74	81.900	ENSCAFG00000003740	PRPF38A	96	71.053	Canis_familiaris
ENSSHAG00000006029	-	74	81.900	ENSCAFG00020010939	PRPF38A	96	71.053	Canis_lupus_dingo
ENSSHAG00000006029	-	74	81.900	ENSCHIG00000024730	PRPF38A	96	71.053	Capra_hircus
ENSSHAG00000006029	-	74	81.900	ENSTSYG00000009868	-	96	71.053	Carlito_syrichta
ENSSHAG00000006029	-	59	78.090	ENSTSYG00000031994	-	91	66.667	Carlito_syrichta
ENSSHAG00000006029	-	74	81.900	ENSCPOG00000005079	PRPF38A	96	71.053	Cavia_porcellus
ENSSHAG00000006029	-	74	81.900	ENSCCAG00000026502	PRPF38A	78	78.689	Cebus_capucinus
ENSSHAG00000006029	-	74	81.900	ENSCATG00000032296	PRPF38A	96	71.053	Cercocebus_atys
ENSSHAG00000006029	-	63	50.794	ENSCATG00000044190	-	74	48.750	Cercocebus_atys
ENSSHAG00000006029	-	74	81.900	ENSCLAG00000005816	PRPF38A	96	71.053	Chinchilla_lanigera
ENSSHAG00000006029	-	74	80.995	ENSCPBG00000014791	PRPF38A	96	70.395	Chrysemys_picta_bellii
ENSSHAG00000006029	-	75	60.714	ENSCSAVG00000009580	-	77	58.921	Ciona_savignyi
ENSSHAG00000006029	-	74	81.900	ENSCANG00000032608	PRPF38A	99	71.429	Colobus_angolensis_palliatus
ENSSHAG00000006029	-	74	81.900	ENSCGRG00001018502	-	96	71.053	Cricetulus_griseus_chok1gshd
ENSSHAG00000006029	-	74	70.721	ENSCGRG00001002557	-	82	69.421	Cricetulus_griseus_chok1gshd
ENSSHAG00000006029	-	74	81.900	ENSCGRG00000014868	Prpf38a	96	71.053	Cricetulus_griseus_crigri
ENSSHAG00000006029	-	74	76.018	ENSCSEG00000001269	prpf38a	84	71.951	Cynoglossus_semilaevis
ENSSHAG00000006029	-	74	77.828	ENSCVAG00000012305	prpf38a	96	67.224	Cyprinodon_variegatus
ENSSHAG00000006029	-	74	75.113	ENSDARG00000039213	prpf38a	77	72.083	Danio_rerio
ENSSHAG00000006029	-	74	81.900	ENSDNOG00000042326	PRPF38A	97	71.429	Dasypus_novemcinctus
ENSSHAG00000006029	-	94	65.018	ENSDORG00000025371	-	84	71.074	Dipodomys_ordii
ENSSHAG00000006029	-	94	65.018	ENSDORG00000023691	-	84	71.074	Dipodomys_ordii
ENSSHAG00000006029	-	74	66.063	ENSDORG00000023857	-	96	59.539	Dipodomys_ordii
ENSSHAG00000006029	-	67	70.647	FBgn0050342	Prp38	58	72.105	Drosophila_melanogaster
ENSSHAG00000006029	-	74	72.197	ENSEBUG00000012588	prpf38a	78	68.724	Eptatretus_burgeri
ENSSHAG00000006029	-	74	81.900	ENSEASG00005014427	PRPF38A	96	71.053	Equus_asinus_asinus
ENSSHAG00000006029	-	74	81.900	ENSECAG00000022628	PRPF38A	96	71.053	Equus_caballus
ENSSHAG00000006029	-	74	75.113	ENSELUG00000021094	prpf38a	99	65.320	Esox_lucius
ENSSHAG00000006029	-	74	81.900	ENSFCAG00000002518	PRPF38A	96	71.053	Felis_catus
ENSSHAG00000006029	-	73	74.771	ENSFALG00000003612	-	80	70.782	Ficedula_albicollis
ENSSHAG00000006029	-	60	76.667	ENSFALG00000005598	-	96	65.517	Ficedula_albicollis
ENSSHAG00000006029	-	83	75.494	ENSFDAG00000011287	PRPF38A	96	70.724	Fukomys_damarensis
ENSSHAG00000006029	-	72	77.880	ENSFHEG00000014317	prpf38a	99	67.340	Fundulus_heteroclitus
ENSSHAG00000006029	-	55	83.735	ENSGMOG00000011384	prpf38a	54	83.735	Gadus_morhua
ENSSHAG00000006029	-	74	80.090	ENSGALG00000010627	PRPF38A	96	69.868	Gallus_gallus
ENSSHAG00000006029	-	74	76.923	ENSGAFG00000012422	prpf38a	96	66.555	Gambusia_affinis
ENSSHAG00000006029	-	74	75.336	ENSGACG00000005423	prpf38a	96	65.449	Gasterosteus_aculeatus
ENSSHAG00000006029	-	74	80.995	ENSGAGG00000020547	PRPF38A	96	70.395	Gopherus_agassizii
ENSSHAG00000006029	-	74	81.900	ENSGGOG00000003940	PRPF38A	96	71.053	Gorilla_gorilla
ENSSHAG00000006029	-	63	80.952	ENSHBUG00000020572	prpf38a	83	80.412	Haplochromis_burtoni
ENSSHAG00000006029	-	74	81.900	ENSHGLG00000000475	PRPF38A	96	71.053	Heterocephalus_glaber_female
ENSSHAG00000006029	-	74	72.398	ENSHGLG00000007918	-	78	69.959	Heterocephalus_glaber_female
ENSSHAG00000006029	-	74	81.900	ENSHGLG00100008935	PRPF38A	96	71.053	Heterocephalus_glaber_male
ENSSHAG00000006029	-	74	72.398	ENSHGLG00100003928	-	78	69.959	Heterocephalus_glaber_male
ENSSHAG00000006029	-	61	81.319	ENSHCOG00000020781	prpf38a	62	78.974	Hippocampus_comes
ENSSHAG00000006029	-	74	74.222	ENSIPUG00000005757	prpf38a	77	72.840	Ictalurus_punctatus
ENSSHAG00000006029	-	74	81.900	ENSSTOG00000015610	PRPF38A	96	71.053	Ictidomys_tridecemlineatus
ENSSHAG00000006029	-	74	81.900	ENSJJAG00000015811	Prpf38a	96	71.053	Jaculus_jaculus
ENSSHAG00000006029	-	74	77.828	ENSKMAG00000006588	prpf38a	96	67.224	Kryptolebias_marmoratus
ENSSHAG00000006029	-	74	75.113	ENSLBEG00000020585	prpf38a	96	65.217	Labrus_bergylta
ENSSHAG00000006029	-	74	77.376	ENSLACG00000011495	PRPF38A	96	67.881	Latimeria_chalumnae
ENSSHAG00000006029	-	74	75.676	ENSLOCG00000006262	prpf38a	96	65.017	Lepisosteus_oculatus
ENSSHAG00000006029	-	74	81.900	ENSLAFG00000025862	PRPF38A	96	71.053	Loxodonta_africana
ENSSHAG00000006029	-	74	81.900	ENSMFAG00000039449	PRPF38A	96	71.053	Macaca_fascicularis
ENSSHAG00000006029	-	60	78.889	ENSMMUG00000014333	PRPF38A	94	67.045	Macaca_mulatta
ENSSHAG00000006029	-	63	50.794	ENSMNEG00000040242	-	77	48.178	Macaca_nemestrina
ENSSHAG00000006029	-	74	81.900	ENSMNEG00000031221	PRPF38A	96	71.053	Macaca_nemestrina
ENSSHAG00000006029	-	74	81.900	ENSMLEG00000041105	PRPF38A	96	71.053	Mandrillus_leucophaeus
ENSSHAG00000006029	-	74	76.471	ENSMAMG00000015431	prpf38a	96	66.221	Mastacembelus_armatus
ENSSHAG00000006029	-	74	75.566	ENSMZEG00005017838	prpf38a	96	65.552	Maylandia_zebra
ENSSHAG00000006029	-	74	80.090	ENSMGAG00000011176	PRPF38A	99	70.234	Meleagris_gallopavo
ENSSHAG00000006029	-	74	78.281	ENSMAUG00000018029	-	92	75.410	Mesocricetus_auratus
ENSSHAG00000006029	-	74	81.900	ENSMICG00000014193	PRPF38A	96	71.053	Microcebus_murinus
ENSSHAG00000006029	-	74	81.900	ENSMOCG00000013080	Prpf38a	96	71.053	Microtus_ochrogaster
ENSSHAG00000006029	-	74	76.923	ENSMMOG00000016972	prpf38a	86	72.541	Mola_mola
ENSSHAG00000006029	-	74	80.180	ENSMODG00000000644	PRPF38A	96	70.492	Monodelphis_domestica
ENSSHAG00000006029	-	74	76.018	ENSMALG00000019363	prpf38a	93	65.886	Monopterus_albus
ENSSHAG00000006029	-	74	80.543	MGP_CAROLIEiJ_G0026269	Prpf38a	96	70.066	Mus_caroli
ENSSHAG00000006029	-	74	80.543	ENSMUSG00000063800	Prpf38a	96	70.066	Mus_musculus
ENSSHAG00000006029	-	74	80.543	MGP_PahariEiJ_G0028602	Prpf38a	96	70.066	Mus_pahari
ENSSHAG00000006029	-	74	80.543	MGP_SPRETEiJ_G0027238	Prpf38a	96	82.990	Mus_spretus
ENSSHAG00000006029	-	74	81.900	ENSMPUG00000006896	PRPF38A	96	71.053	Mustela_putorius_furo
ENSSHAG00000006029	-	74	81.900	ENSNGAG00000011884	Prpf38a	96	71.053	Nannospalax_galili
ENSSHAG00000006029	-	74	74.661	ENSNBRG00000004013	prpf38a	79	70.732	Neolamprologus_brichardi
ENSSHAG00000006029	-	73	49.772	ENSNLEG00000033398	-	69	49.590	Nomascus_leucogenys
ENSSHAG00000006029	-	66	81.313	ENSNLEG00000017999	PRPF38A	89	69.751	Nomascus_leucogenys
ENSSHAG00000006029	-	100	50.000	ENSNLEG00000012592	-	98	51.316	Nomascus_leucogenys
ENSSHAG00000006029	-	74	78.281	ENSMEUG00000003860	PRPF38A	96	68.421	Notamacropus_eugenii
ENSSHAG00000006029	-	74	81.900	ENSOPRG00000008985	PRPF38A	100	78.512	Ochotona_princeps
ENSSHAG00000006029	-	74	81.900	ENSODEG00000005869	PRPF38A	96	71.053	Octodon_degus
ENSSHAG00000006029	-	74	76.018	ENSONIG00000007816	prpf38a	96	65.886	Oreochromis_niloticus
ENSSHAG00000006029	-	74	41.441	ENSOANG00000009541	-	96	42.484	Ornithorhynchus_anatinus
ENSSHAG00000006029	-	74	81.900	ENSOCUG00000000963	PRPF38A	96	71.053	Oryctolagus_cuniculus
ENSSHAG00000006029	-	74	76.471	ENSORLG00000013485	prpf38a	99	66.330	Oryzias_latipes
ENSSHAG00000006029	-	74	76.471	ENSORLG00020002130	prpf38a	99	66.330	Oryzias_latipes_hni
ENSSHAG00000006029	-	74	76.018	ENSORLG00015021393	prpf38a	99	65.993	Oryzias_latipes_hsok
ENSSHAG00000006029	-	74	76.923	ENSOMEG00000016333	prpf38a	78	73.750	Oryzias_melastigma
ENSSHAG00000006029	-	74	81.900	ENSOGAG00000005423	PRPF38A	96	71.053	Otolemur_garnettii
ENSSHAG00000006029	-	74	81.900	ENSOARG00000005373	PRPF38A	96	71.053	Ovis_aries
ENSSHAG00000006029	-	74	81.900	ENSPPAG00000030905	PRPF38A	96	71.053	Pan_paniscus
ENSSHAG00000006029	-	94	55.363	ENSPPAG00000033867	-	76	63.636	Pan_paniscus
ENSSHAG00000006029	-	74	81.900	ENSPPRG00000013268	PRPF38A	96	71.053	Panthera_pardus
ENSSHAG00000006029	-	74	81.900	ENSPTIG00000015419	PRPF38A	96	71.053	Panthera_tigris_altaica
ENSSHAG00000006029	-	74	81.900	ENSPTRG00000000739	PRPF38A	96	71.053	Pan_troglodytes
ENSSHAG00000006029	-	74	81.900	ENSPANG00000015483	PRPF38A	96	71.053	Papio_anubis
ENSSHAG00000006029	-	74	76.018	ENSPKIG00000011439	prpf38a	96	65.333	Paramormyrops_kingsleyae
ENSSHAG00000006029	-	74	80.090	ENSPSIG00000017487	PRPF38A	96	69.737	Pelodiscus_sinensis
ENSSHAG00000006029	-	72	76.959	ENSPMGG00000021352	prpf38a	82	73.333	Periophthalmus_magnuspinnatus
ENSSHAG00000006029	-	74	81.900	ENSPEMG00000023277	-	96	71.053	Peromyscus_maniculatus_bairdii
ENSSHAG00000006029	-	74	75.785	ENSPEMG00000011212	-	96	66.885	Peromyscus_maniculatus_bairdii
ENSSHAG00000006029	-	74	79.730	ENSPCIG00000022369	-	96	70.164	Phascolarctos_cinereus
ENSSHAG00000006029	-	74	76.923	ENSPFOG00000004248	prpf38a	96	66.555	Poecilia_formosa
ENSSHAG00000006029	-	74	76.923	ENSPLAG00000010328	prpf38a	96	66.555	Poecilia_latipinna
ENSSHAG00000006029	-	74	76.923	ENSPMEG00000011804	prpf38a	96	66.555	Poecilia_mexicana
ENSSHAG00000006029	-	62	82.353	ENSPREG00000002835	prpf38a	60	80.928	Poecilia_reticulata
ENSSHAG00000006029	-	74	72.124	ENSPPYG00000001348	PRPF38A	96	64.078	Pongo_abelii
ENSSHAG00000006029	-	74	81.900	ENSPCAG00000013328	PRPF38A	96	71.053	Procavia_capensis
ENSSHAG00000006029	-	87	60.949	ENSPCOG00000020709	-	82	63.454	Propithecus_coquereli
ENSSHAG00000006029	-	74	81.900	ENSPCOG00000016387	-	96	71.053	Propithecus_coquereli
ENSSHAG00000006029	-	74	81.900	ENSPVAG00000009803	PRPF38A	96	71.053	Pteropus_vampyrus
ENSSHAG00000006029	-	74	75.566	ENSPNYG00000005571	prpf38a	96	65.552	Pundamilia_nyererei
ENSSHAG00000006029	-	74	76.018	ENSPNAG00000010399	prpf38a	77	72.917	Pygocentrus_nattereri
ENSSHAG00000006029	-	74	81.448	ENSRNOG00000009451	Prpf38a	96	70.724	Rattus_norvegicus
ENSSHAG00000006029	-	74	81.900	ENSRBIG00000036442	PRPF38A	99	71.429	Rhinopithecus_bieti
ENSSHAG00000006029	-	85	62.016	ENSRROG00000040003	-	79	63.525	Rhinopithecus_roxellana
ENSSHAG00000006029	-	74	81.900	ENSRROG00000032788	PRPF38A	96	71.053	Rhinopithecus_roxellana
ENSSHAG00000006029	-	74	81.900	ENSSBOG00000019515	PRPF38A	96	71.053	Saimiri_boliviensis_boliviensis
ENSSHAG00000006029	-	62	81.818	ENSSFOG00015013572	prpf38a	96	63.696	Scleropages_formosus
ENSSHAG00000006029	-	74	77.376	ENSSMAG00000015379	prpf38a	96	66.890	Scophthalmus_maximus
ENSSHAG00000006029	-	74	76.923	ENSSDUG00000001324	prpf38a	96	66.555	Seriola_dumerili
ENSSHAG00000006029	-	74	76.923	ENSSLDG00000014803	prpf38a	96	66.555	Seriola_lalandi_dorsalis
ENSSHAG00000006029	-	74	60.633	ENSSARG00000014458	PRPF38A	96	55.592	Sorex_araneus
ENSSHAG00000006029	-	74	79.638	ENSSPUG00000013259	PRPF38A	96	69.536	Sphenodon_punctatus
ENSSHAG00000006029	-	74	60.181	ENSSPAG00000010449	prpf38a	77	57.724	Stegastes_partitus
ENSSHAG00000006029	-	74	81.900	ENSSSCG00000028288	PRPF38A	96	71.053	Sus_scrofa
ENSSHAG00000006029	-	74	74.661	ENSTGUG00000008995	PRPF38A	96	65.563	Taeniopygia_guttata
ENSSHAG00000006029	-	74	77.828	ENSTRUG00000003374	prpf38a	74	74.583	Takifugu_rubripes
ENSSHAG00000006029	-	74	78.475	ENSTNIG00000005533	prpf38a	96	67.774	Tetraodon_nigroviridis
ENSSHAG00000006029	-	74	81.900	ENSTBEG00000000725	PRPF38A	96	71.053	Tupaia_belangeri
ENSSHAG00000006029	-	74	81.900	ENSTTRG00000016139	PRPF38A	96	71.053	Tursiops_truncatus
ENSSHAG00000006029	-	74	81.900	ENSUAMG00000000625	PRPF38A	96	71.053	Ursus_americanus
ENSSHAG00000006029	-	74	81.900	ENSUMAG00000022674	PRPF38A	96	71.053	Ursus_maritimus
ENSSHAG00000006029	-	74	81.448	ENSVPAG00000000907	PRPF38A	78	78.279	Vicugna_pacos
ENSSHAG00000006029	-	74	81.900	ENSVVUG00000004475	PRPF38A	96	71.053	Vulpes_vulpes
ENSSHAG00000006029	-	74	78.281	ENSXETG00000008060	prpf38a	96	66.556	Xenopus_tropicalis
ENSSHAG00000006029	-	74	75.336	ENSXCOG00000007393	prpf38a	82	71.084	Xiphophorus_couchianus
ENSSHAG00000006029	-	74	76.923	ENSXMAG00000026143	prpf38a	96	66.555	Xiphophorus_maculatus