EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000006167 (Gene tree)
Gene ID: 100928308
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 15335 bases
Position: chrGL857007.1:209855-225189
Accession: 100928308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007096	RRM_4	PF10598.9	2.5e-48	1	1
ENSSHAP00000007096	U5_2-snRNA_bdg	PF10597.9	4.9e-74	1	1
ENSSHAP00000007096	PRO8NT	PF08082.11	1e-86	1	1
ENSSHAP00000007096	U6-snRNA_bdg	PF10596.9	1.2e-89	1	1
ENSSHAP00000007096	PROCN	PF08083.11	1.3e-235	1	1
ENSSHAP00000007096	PRP8_domainIV	PF12134.8	5.6e-130	1	1
ENSSHAP00000007096	PROCT	PF08084.11	2.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000007158	PRPF8-201	7096	XM_023503711	ENSSHAP00000007096	2335 (aa)	XP_023359479	G3VV91

Gene Model

Click here to download ENSSHAG00000006167's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006167	PRPF8	100	99.786	ENSG00000174231	PRPF8	100	99.786	Homo_sapiens
ENSSHAG00000006167	PRPF8	100	97.565	ENSAPOG00000010079	prpf8	100	97.565	Acanthochromis_polyacanthus
ENSSHAG00000006167	PRPF8	100	99.786	ENSAMEG00000007940	PRPF8	100	99.786	Ailuropoda_melanoleuca
ENSSHAG00000006167	PRPF8	100	95.422	ENSACIG00000018280	prpf8	100	95.798	Amphilophus_citrinellus
ENSSHAG00000006167	PRPF8	100	97.565	ENSAOCG00000010725	prpf8	100	97.565	Amphiprion_ocellaris
ENSSHAG00000006167	PRPF8	100	97.565	ENSAPEG00000014397	prpf8	100	97.565	Amphiprion_percula
ENSSHAG00000006167	PRPF8	100	97.010	ENSATEG00000010062	prpf8	100	97.010	Anabas_testudineus
ENSSHAG00000006167	PRPF8	96	99.511	ENSAPLG00000010357	PRPF8	100	99.511	Anas_platyrhynchos
ENSSHAG00000006167	PRPF8	83	97.425	ENSACAG00000014784	PRPF8	99	97.425	Anolis_carolinensis
ENSSHAG00000006167	PRPF8	100	99.786	ENSANAG00000032629	PRPF8	100	99.786	Aotus_nancymaae
ENSSHAG00000006167	PRPF8	100	97.319	ENSACLG00000020858	prpf8	100	97.319	Astatotilapia_calliptera
ENSSHAG00000006167	PRPF8	100	97.688	ENSAMXG00000020291	prpf8	100	97.688	Astyanax_mexicanus
ENSSHAG00000006167	PRPF8	100	99.786	ENSBTAG00000011488	PRPF8	100	99.786	Bos_taurus
ENSSHAG00000006167	PRPF8	99	86.552	WBGene00004187	prp-8	99	86.638	Caenorhabditis_elegans
ENSSHAG00000006167	PRPF8	100	99.786	ENSCJAG00000001911	PRPF8	100	99.786	Callithrix_jacchus
ENSSHAG00000006167	PRPF8	100	99.786	ENSCAFG00000019221	PRPF8	100	99.786	Canis_familiaris
ENSSHAG00000006167	PRPF8	96	99.822	ENSCAFG00020009943	PRPF8	100	99.822	Canis_lupus_dingo
ENSSHAG00000006167	PRPF8	100	99.786	ENSCHIG00000017499	PRPF8	100	99.786	Capra_hircus
ENSSHAG00000006167	PRPF8	100	99.786	ENSTSYG00000014120	PRPF8	100	99.786	Carlito_syrichta
ENSSHAG00000006167	PRPF8	96	97.595	ENSCAPG00000009459	PRPF8	99	97.595	Cavia_aperea
ENSSHAG00000006167	PRPF8	100	99.786	ENSCPOG00000010379	PRPF8	100	99.786	Cavia_porcellus
ENSSHAG00000006167	PRPF8	100	99.786	ENSCCAG00000031983	-	100	99.786	Cebus_capucinus
ENSSHAG00000006167	PRPF8	100	99.786	ENSCATG00000038595	PRPF8	100	99.786	Cercocebus_atys
ENSSHAG00000006167	PRPF8	100	99.786	ENSCLAG00000004388	PRPF8	100	99.786	Chinchilla_lanigera
ENSSHAG00000006167	PRPF8	100	99.786	ENSCSAG00000013929	PRPF8	100	99.786	Chlorocebus_sabaeus
ENSSHAG00000006167	PRPF8	81	99.475	ENSCHOG00000008590	PRPF8	88	99.475	Choloepus_hoffmanni
ENSSHAG00000006167	PRPF8	100	99.486	ENSCPBG00000020409	PRPF8	100	99.486	Chrysemys_picta_bellii
ENSSHAG00000006167	PRPF8	99	92.874	ENSCSAVG00000007825	-	100	91.151	Ciona_savignyi
ENSSHAG00000006167	PRPF8	100	99.786	ENSCANG00000043088	PRPF8	100	99.786	Colobus_angolensis_palliatus
ENSSHAG00000006167	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSSHAG00000006167	PRPF8	100	97.606	ENSCSEG00000007905	prpf8	100	97.606	Cynoglossus_semilaevis
ENSSHAG00000006167	PRPF8	100	97.566	ENSDARG00000026180	prpf8	100	97.566	Danio_rerio
ENSSHAG00000006167	PRPF8	93	99.862	ENSDNOG00000018471	PRPF8	99	99.862	Dasypus_novemcinctus
ENSSHAG00000006167	PRPF8	84	99.361	ENSDORG00000006185	Prpf8	96	99.361	Dipodomys_ordii
ENSSHAG00000006167	PRPF8	99	91.256	FBgn0033688	Prp8	97	91.256	Drosophila_melanogaster
ENSSHAG00000006167	PRPF8	100	94.347	ENSETEG00000017592	PRPF8	100	94.347	Echinops_telfairi
ENSSHAG00000006167	PRPF8	99	93.600	ENSEBUG00000006548	prpf8	99	93.600	Eptatretus_burgeri
ENSSHAG00000006167	PRPF8	100	99.786	ENSEASG00005009514	PRPF8	100	99.786	Equus_asinus_asinus
ENSSHAG00000006167	PRPF8	97	99.824	ENSECAG00000021318	PRPF8	100	99.824	Equus_caballus
ENSSHAG00000006167	PRPF8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSSHAG00000006167	PRPF8	98	96.460	ENSELUG00000007120	prpf8	99	96.460	Esox_lucius
ENSSHAG00000006167	PRPF8	100	99.786	ENSFCAG00000006297	PRPF8	100	99.786	Felis_catus
ENSSHAG00000006167	PRPF8	100	99.443	ENSFALG00000006628	PRPF8	100	99.443	Ficedula_albicollis
ENSSHAG00000006167	PRPF8	100	99.786	ENSFDAG00000004711	PRPF8	100	99.786	Fukomys_damarensis
ENSSHAG00000006167	PRPF8	100	97.310	ENSFHEG00000021084	prpf8	100	97.310	Fundulus_heteroclitus
ENSSHAG00000006167	PRPF8	100	95.347	ENSGMOG00000002028	prpf8	99	95.347	Gadus_morhua
ENSSHAG00000006167	PRPF8	100	99.400	ENSGALG00000002943	PRPF8	100	99.400	Gallus_gallus
ENSSHAG00000006167	PRPF8	99	97.392	ENSGAFG00000010337	prpf8	99	97.392	Gambusia_affinis
ENSSHAG00000006167	PRPF8	100	97.473	ENSGACG00000008504	prpf8	100	97.473	Gasterosteus_aculeatus
ENSSHAG00000006167	PRPF8	100	99.486	ENSGAGG00000008350	PRPF8	100	99.486	Gopherus_agassizii
ENSSHAG00000006167	PRPF8	100	99.786	ENSGGOG00000005516	PRPF8	100	99.786	Gorilla_gorilla
ENSSHAG00000006167	PRPF8	100	97.516	ENSHBUG00000016192	prpf8	100	97.516	Haplochromis_burtoni
ENSSHAG00000006167	PRPF8	100	99.786	ENSHGLG00000012029	PRPF8	100	99.786	Heterocephalus_glaber_female
ENSSHAG00000006167	PRPF8	100	99.786	ENSHGLG00100016494	PRPF8	100	99.786	Heterocephalus_glaber_male
ENSSHAG00000006167	PRPF8	100	97.520	ENSHCOG00000016414	prpf8	100	97.520	Hippocampus_comes
ENSSHAG00000006167	PRPF8	100	97.562	ENSIPUG00000023230	prpf8	100	97.562	Ictalurus_punctatus
ENSSHAG00000006167	PRPF8	100	99.786	ENSSTOG00000005128	PRPF8	100	99.786	Ictidomys_tridecemlineatus
ENSSHAG00000006167	PRPF8	100	97.602	ENSJJAG00000021159	Prpf8	100	97.602	Jaculus_jaculus
ENSSHAG00000006167	PRPF8	99	97.809	ENSKMAG00000016118	prpf8	99	97.809	Kryptolebias_marmoratus
ENSSHAG00000006167	PRPF8	100	97.435	ENSLBEG00000026903	prpf8	100	97.435	Labrus_bergylta
ENSSHAG00000006167	PRPF8	95	96.027	ENSLACG00000010479	PRPF8	99	98.551	Latimeria_chalumnae
ENSSHAG00000006167	PRPF8	99	97.776	ENSLOCG00000005409	prpf8	99	97.776	Lepisosteus_oculatus
ENSSHAG00000006167	PRPF8	100	99.786	ENSLAFG00000015445	PRPF8	100	99.786	Loxodonta_africana
ENSSHAG00000006167	PRPF8	100	99.786	ENSMFAG00000039995	PRPF8	100	99.786	Macaca_fascicularis
ENSSHAG00000006167	PRPF8	100	99.786	ENSMMUG00000004820	PRPF8	100	99.786	Macaca_mulatta
ENSSHAG00000006167	PRPF8	100	99.786	ENSMNEG00000035713	PRPF8	100	99.786	Macaca_nemestrina
ENSSHAG00000006167	PRPF8	100	99.786	ENSMLEG00000037937	PRPF8	100	99.786	Mandrillus_leucophaeus
ENSSHAG00000006167	PRPF8	100	97.522	ENSMAMG00000008919	prpf8	100	97.522	Mastacembelus_armatus
ENSSHAG00000006167	PRPF8	100	97.319	ENSMZEG00005015073	prpf8	100	97.319	Maylandia_zebra
ENSSHAG00000006167	PRPF8	100	99.400	ENSMGAG00000004769	PRPF8	100	99.400	Meleagris_gallopavo
ENSSHAG00000006167	PRPF8	100	99.743	ENSMICG00000010320	PRPF8	100	99.743	Microcebus_murinus
ENSSHAG00000006167	PRPF8	100	99.743	ENSMOCG00000016838	Prpf8	100	99.743	Microtus_ochrogaster
ENSSHAG00000006167	PRPF8	100	97.053	ENSMMOG00000011887	prpf8	100	97.053	Mola_mola
ENSSHAG00000006167	PRPF8	100	99.957	ENSMODG00000010480	PRPF8	100	99.957	Monodelphis_domestica
ENSSHAG00000006167	PRPF8	97	97.438	ENSMALG00000003558	prpf8	100	97.438	Monopterus_albus
ENSSHAG00000006167	PRPF8	100	99.700	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.700	Mus_caroli
ENSSHAG00000006167	PRPF8	100	99.700	ENSMUSG00000020850	Prpf8	100	99.700	Mus_musculus
ENSSHAG00000006167	PRPF8	100	99.700	MGP_PahariEiJ_G0017877	Prpf8	100	99.700	Mus_pahari
ENSSHAG00000006167	PRPF8	100	99.700	MGP_SPRETEiJ_G0017583	Prpf8	100	99.700	Mus_spretus
ENSSHAG00000006167	PRPF8	100	99.786	ENSMPUG00000013227	PRPF8	100	99.786	Mustela_putorius_furo
ENSSHAG00000006167	PRPF8	100	99.572	ENSMLUG00000002666	PRPF8	100	99.572	Myotis_lucifugus
ENSSHAG00000006167	PRPF8	100	97.987	ENSNGAG00000005305	Prpf8	100	97.987	Nannospalax_galili
ENSSHAG00000006167	PRPF8	100	97.362	ENSNBRG00000013127	prpf8	100	97.362	Neolamprologus_brichardi
ENSSHAG00000006167	PRPF8	97	97.445	ENSNLEG00000000897	PRPF8	98	97.445	Nomascus_leucogenys
ENSSHAG00000006167	PRPF8	99	98.131	ENSMEUG00000015999	PRPF8	100	98.131	Notamacropus_eugenii
ENSSHAG00000006167	PRPF8	100	98.244	ENSOPRG00000003102	PRPF8	100	98.244	Ochotona_princeps
ENSSHAG00000006167	PRPF8	100	99.786	ENSODEG00000008468	PRPF8	100	99.786	Octodon_degus
ENSSHAG00000006167	PRPF8	100	97.363	ENSONIG00000008153	prpf8	100	97.363	Oreochromis_niloticus
ENSSHAG00000006167	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSSHAG00000006167	PRPF8	100	99.786	ENSOCUG00000000081	PRPF8	100	99.786	Oryctolagus_cuniculus
ENSSHAG00000006167	PRPF8	99	97.559	ENSORLG00000008036	prpf8	99	97.559	Oryzias_latipes
ENSSHAG00000006167	PRPF8	99	97.517	ENSORLG00020021070	prpf8	99	97.517	Oryzias_latipes_hni
ENSSHAG00000006167	PRPF8	99	97.559	ENSORLG00015002340	prpf8	99	97.559	Oryzias_latipes_hsok
ENSSHAG00000006167	PRPF8	99	96.058	ENSOMEG00000016866	prpf8	99	96.058	Oryzias_melastigma
ENSSHAG00000006167	PRPF8	100	99.658	ENSOARG00000013312	PRPF8	100	99.658	Ovis_aries
ENSSHAG00000006167	PRPF8	100	99.786	ENSPPAG00000042753	PRPF8	100	99.786	Pan_paniscus
ENSSHAG00000006167	PRPF8	100	99.786	ENSPPRG00000008746	PRPF8	100	99.786	Panthera_pardus
ENSSHAG00000006167	PRPF8	100	99.700	ENSPTIG00000019200	PRPF8	100	99.700	Panthera_tigris_altaica
ENSSHAG00000006167	PRPF8	100	99.786	ENSPTRG00000039576	PRPF8	100	99.786	Pan_troglodytes
ENSSHAG00000006167	PRPF8	99	98.885	ENSPANG00000024607	PRPF8	99	98.885	Papio_anubis
ENSSHAG00000006167	PRPF8	100	97.277	ENSPKIG00000011201	prpf8	100	97.277	Paramormyrops_kingsleyae
ENSSHAG00000006167	PRPF8	100	99.443	ENSPSIG00000013393	PRPF8	100	99.443	Pelodiscus_sinensis
ENSSHAG00000006167	PRPF8	100	99.743	ENSPEMG00000021699	Prpf8	100	99.743	Peromyscus_maniculatus_bairdii
ENSSHAG00000006167	PRPF8	96	93.719	ENSPMAG00000005438	prpf8	100	93.764	Petromyzon_marinus
ENSSHAG00000006167	PRPF8	100	99.957	ENSPCIG00000022603	PRPF8	100	99.957	Phascolarctos_cinereus
ENSSHAG00000006167	PRPF8	100	96.863	ENSPFOG00000007005	prpf8	100	96.863	Poecilia_formosa
ENSSHAG00000006167	PRPF8	100	96.274	ENSPLAG00000020777	prpf8	100	96.274	Poecilia_latipinna
ENSSHAG00000006167	PRPF8	100	96.863	ENSPMEG00000004051	prpf8	100	96.863	Poecilia_mexicana
ENSSHAG00000006167	PRPF8	100	97.602	ENSPREG00000021902	prpf8	100	97.602	Poecilia_reticulata
ENSSHAG00000006167	PRPF8	100	99.786	ENSPPYG00000007777	PRPF8	100	99.786	Pongo_abelii
ENSSHAG00000006167	PRPF8	90	99.529	ENSPCAG00000008938	PRPF8	90	99.529	Procavia_capensis
ENSSHAG00000006167	PRPF8	100	99.743	ENSPCOG00000015182	PRPF8	100	99.743	Propithecus_coquereli
ENSSHAG00000006167	PRPF8	93	99.653	ENSPVAG00000002134	PRPF8	93	99.653	Pteropus_vampyrus
ENSSHAG00000006167	PRPF8	100	97.516	ENSPNYG00000016356	prpf8	100	97.516	Pundamilia_nyererei
ENSSHAG00000006167	PRPF8	100	97.605	ENSPNAG00000009247	prpf8	100	97.605	Pygocentrus_nattereri
ENSSHAG00000006167	PRPF8	100	99.700	ENSRNOG00000003495	Prpf8	100	99.700	Rattus_norvegicus
ENSSHAG00000006167	PRPF8	100	99.786	ENSRBIG00000031219	PRPF8	100	99.786	Rhinopithecus_bieti
ENSSHAG00000006167	PRPF8	100	99.786	ENSRROG00000038014	PRPF8	100	99.786	Rhinopithecus_roxellana
ENSSHAG00000006167	PRPF8	99	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSSHAG00000006167	PRPF8	100	99.786	ENSSBOG00000029717	PRPF8	100	99.786	Saimiri_boliviensis_boliviensis
ENSSHAG00000006167	PRPF8	100	97.395	ENSSFOG00015013905	prpf8	100	97.395	Scleropages_formosus
ENSSHAG00000006167	PRPF8	100	97.352	ENSSMAG00000017736	prpf8	100	97.352	Scophthalmus_maximus
ENSSHAG00000006167	PRPF8	100	97.522	ENSSDUG00000003029	prpf8	100	97.522	Seriola_dumerili
ENSSHAG00000006167	PRPF8	68	98.748	ENSSLDG00000017096	prpf8	100	98.748	Seriola_lalandi_dorsalis
ENSSHAG00000006167	PRPF8	87	99.244	ENSSARG00000002892	PRPF8	87	99.244	Sorex_araneus
ENSSHAG00000006167	PRPF8	100	99.272	ENSSPUG00000007463	PRPF8	100	99.272	Sphenodon_punctatus
ENSSHAG00000006167	PRPF8	100	96.967	ENSSPAG00000015639	prpf8	100	96.967	Stegastes_partitus
ENSSHAG00000006167	PRPF8	100	99.786	ENSSSCG00000017817	PRPF8	100	99.786	Sus_scrofa
ENSSHAG00000006167	PRPF8	100	99.443	ENSTGUG00000005648	-	100	99.443	Taeniopygia_guttata
ENSSHAG00000006167	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSSHAG00000006167	PRPF8	100	97.520	ENSTRUG00000015906	prpf8	100	97.520	Takifugu_rubripes
ENSSHAG00000006167	PRPF8	95	98.686	ENSTNIG00000003460	prpf8	99	98.686	Tetraodon_nigroviridis
ENSSHAG00000006167	PRPF8	93	99.932	ENSTBEG00000006431	PRPF8	93	99.932	Tupaia_belangeri
ENSSHAG00000006167	PRPF8	100	99.186	ENSTTRG00000006869	PRPF8	100	99.186	Tursiops_truncatus
ENSSHAG00000006167	PRPF8	54	99.290	ENSUAMG00000015644	-	96	99.290	Ursus_americanus
ENSSHAG00000006167	PRPF8	100	99.529	ENSUMAG00000009385	PRPF8	100	99.529	Ursus_maritimus
ENSSHAG00000006167	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSSHAG00000006167	PRPF8	100	99.786	ENSVVUG00000021695	PRPF8	99	99.786	Vulpes_vulpes
ENSSHAG00000006167	PRPF8	100	98.716	ENSXETG00000022259	prpf8	100	98.716	Xenopus_tropicalis
ENSSHAG00000006167	PRPF8	100	97.438	ENSXCOG00000012775	prpf8	100	97.438	Xiphophorus_couchianus
ENSSHAG00000006167	PRPF8	100	97.481	ENSXMAG00000008505	prpf8	100	97.481	Xiphophorus_maculatus