EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006412 (Gene tree)
Gene ID: 100917993
Gene Symbol: SMPD3
Alias: NSMASE2
Full Name: sphingomyelin phosphodiesterase 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 29067 bases
Position: chrGL834764.1:227899-256965
Accession: 14240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007376	Exo_endo_phos	PF03372.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000007438	SMPD3-201	1953	-	ENSSHAP00000007376	650 (aa)	-	G3VW21

Gene Model

Click here to download ENSSHAG00000006412's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr00600	Sphingolipid metabolism	KEGG
shr01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006412	SMPD3	74	41.538	ENSSHAG00000004065	-	95	43.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006412	SMPD3	77	50.799	ENSAPOG00000005846	smpd5	89	50.799	Acanthochromis_polyacanthus
ENSSHAG00000006412	SMPD3	76	49.682	ENSACIG00000015732	smpd5	82	49.682	Amphilophus_citrinellus
ENSSHAG00000006412	SMPD3	75	51.780	ENSAOCG00000001729	smpd5	88	51.780	Amphiprion_ocellaris
ENSSHAG00000006412	SMPD3	75	51.456	ENSAPEG00000010110	smpd5	88	51.456	Amphiprion_percula
ENSSHAG00000006412	SMPD3	75	49.383	ENSATEG00000005476	smpd5	84	49.383	Anabas_testudineus
ENSSHAG00000006412	SMPD3	69	40.066	ENSACAG00000005338	-	95	40.066	Anolis_carolinensis
ENSSHAG00000006412	SMPD3	75	50.974	ENSACLG00000004150	smpd5	90	50.974	Astatotilapia_calliptera
ENSSHAG00000006412	SMPD3	99	40.668	ENSAMXG00000015890	smpd5	88	53.722	Astyanax_mexicanus
ENSSHAG00000006412	SMPD3	99	53.284	ENSAMXG00000009000	smpd3	99	52.836	Astyanax_mexicanus
ENSSHAG00000006412	SMPD3	71	49.346	ENSCPBG00000007123	-	93	49.346	Chrysemys_picta_bellii
ENSSHAG00000006412	SMPD3	71	45.183	ENSCGRG00001020226	Smpd5	91	45.183	Cricetulus_griseus_chok1gshd
ENSSHAG00000006412	SMPD3	71	45.183	ENSCGRG00000016807	Smpd5	91	45.183	Cricetulus_griseus_crigri
ENSSHAG00000006412	SMPD3	68	51.266	ENSCSEG00000004339	smpd5	76	51.266	Cynoglossus_semilaevis
ENSSHAG00000006412	SMPD3	81	49.363	ENSDARG00000059811	smpd5	87	49.363	Danio_rerio
ENSSHAG00000006412	SMPD3	70	44.667	ENSEASG00005009745	-	92	44.667	Equus_asinus_asinus
ENSSHAG00000006412	SMPD3	70	44.667	ENSECAG00000011998	-	92	44.667	Equus_caballus
ENSSHAG00000006412	SMPD3	99	38.872	ENSELUG00000002998	smpd5	99	39.462	Esox_lucius
ENSSHAG00000006412	SMPD3	100	69.743	ENSFCAG00000023364	SMPD3	100	69.743	Felis_catus
ENSSHAG00000006412	SMPD3	60	52.427	ENSGMOG00000006983	smpd5	83	52.427	Gadus_morhua
ENSSHAG00000006412	SMPD3	89	43.377	ENSGAFG00000005978	smpd5	95	43.377	Gambusia_affinis
ENSSHAG00000006412	SMPD3	70	47.386	ENSGAGG00000010557	-	94	47.386	Gopherus_agassizii
ENSSHAG00000006412	SMPD3	75	50.974	ENSHBUG00000017212	smpd5	90	50.974	Haplochromis_burtoni
ENSSHAG00000006412	SMPD3	80	50.974	ENSHCOG00000005211	smpd5	84	50.974	Hippocampus_comes
ENSSHAG00000006412	SMPD3	90	46.154	ENSIPUG00000007675	Smpd3	99	46.154	Ictalurus_punctatus
ENSSHAG00000006412	SMPD3	71	45.847	ENSSTOG00000026841	-	93	45.695	Ictidomys_tridecemlineatus
ENSSHAG00000006412	SMPD3	72	49.206	ENSKMAG00000014523	smpd5	97	49.206	Kryptolebias_marmoratus
ENSSHAG00000006412	SMPD3	75	50.485	ENSLBEG00000000634	smpd5	80	50.485	Labrus_bergylta
ENSSHAG00000006412	SMPD3	75	49.838	ENSMAMG00000012885	smpd5	81	49.838	Mastacembelus_armatus
ENSSHAG00000006412	SMPD3	75	51.299	ENSMZEG00005014373	smpd5	82	51.299	Maylandia_zebra
ENSSHAG00000006412	SMPD3	75	42.444	ENSMICG00000044882	-	94	43.934	Microcebus_murinus
ENSSHAG00000006412	SMPD3	69	46.512	ENSMOCG00000004813	Smpd5	88	46.512	Microtus_ochrogaster
ENSSHAG00000006412	SMPD3	72	43.854	ENSMODG00000024098	-	94	45.215	Monodelphis_domestica
ENSSHAG00000006412	SMPD3	100	88.957	ENSMODG00000005091	SMPD3	100	88.957	Monodelphis_domestica
ENSSHAG00000006412	SMPD3	75	51.299	ENSNBRG00000015871	smpd5	82	51.299	Neolamprologus_brichardi
ENSSHAG00000006412	SMPD3	64	92.199	ENSMEUG00000015228	-	100	92.908	Notamacropus_eugenii
ENSSHAG00000006412	SMPD3	75	51.299	ENSONIG00000003005	smpd5	82	51.299	Oreochromis_niloticus
ENSSHAG00000006412	SMPD3	69	43.322	ENSOANG00000015137	-	89	43.322	Ornithorhynchus_anatinus
ENSSHAG00000006412	SMPD3	88	42.105	ENSORLG00000007890	smpd5	98	43.182	Oryzias_latipes
ENSSHAG00000006412	SMPD3	92	41.809	ENSORLG00020014621	smpd5	98	42.045	Oryzias_latipes_hni
ENSSHAG00000006412	SMPD3	88	42.105	ENSORLG00015020862	smpd5	98	43.182	Oryzias_latipes_hsok
ENSSHAG00000006412	SMPD3	94	42.647	ENSOMEG00000021400	smpd5	98	42.647	Oryzias_melastigma
ENSSHAG00000006412	SMPD3	68	40.000	ENSOARG00000015429	-	85	40.000	Ovis_aries
ENSSHAG00000006412	SMPD3	100	69.592	ENSPPRG00000012973	SMPD3	100	69.592	Panthera_pardus
ENSSHAG00000006412	SMPD3	70	43.189	ENSPPRG00000024542	-	92	43.189	Panthera_pardus
ENSSHAG00000006412	SMPD3	91	70.300	ENSPTIG00000006728	SMPD3	100	70.300	Panthera_tigris_altaica
ENSSHAG00000006412	SMPD3	76	51.429	ENSPKIG00000019783	smpd5	84	51.429	Paramormyrops_kingsleyae
ENSSHAG00000006412	SMPD3	99	52.811	ENSPKIG00000015630	smpd3	99	52.811	Paramormyrops_kingsleyae
ENSSHAG00000006412	SMPD3	85	41.892	ENSPMGG00000011984	smpd5	96	45.042	Periophthalmus_magnuspinnatus
ENSSHAG00000006412	SMPD3	70	43.974	ENSPEMG00000015740	Smpd5	90	43.974	Peromyscus_maniculatus_bairdii
ENSSHAG00000006412	SMPD3	72	44.518	ENSPCIG00000009107	-	91	46.179	Phascolarctos_cinereus
ENSSHAG00000006412	SMPD3	75	47.239	ENSPFOG00000002379	smpd5	85	47.239	Poecilia_formosa
ENSSHAG00000006412	SMPD3	75	47.678	ENSPLAG00000015772	smpd5	85	47.678	Poecilia_latipinna
ENSSHAG00000006412	SMPD3	73	48.544	ENSPMEG00000001599	smpd5	83	48.544	Poecilia_mexicana
ENSSHAG00000006412	SMPD3	80	47.678	ENSPREG00000000831	smpd5	95	42.932	Poecilia_reticulata
ENSSHAG00000006412	SMPD3	75	51.299	ENSPNYG00000015647	smpd5	90	51.299	Pundamilia_nyererei
ENSSHAG00000006412	SMPD3	79	52.751	ENSPNAG00000018539	smpd5	86	52.751	Pygocentrus_nattereri
ENSSHAG00000006412	SMPD3	99	51.705	ENSPNAG00000001774	smpd3	99	51.714	Pygocentrus_nattereri
ENSSHAG00000006412	SMPD3	99	38.450	ENSSFOG00015000870	smpd5	99	38.450	Scleropages_formosus
ENSSHAG00000006412	SMPD3	88	44.246	ENSSMAG00000020132	smpd5	99	37.900	Scophthalmus_maximus
ENSSHAG00000006412	SMPD3	75	50.980	ENSSDUG00000005881	smpd5	81	50.980	Seriola_dumerili
ENSSHAG00000006412	SMPD3	75	50.654	ENSSLDG00000015320	smpd5	81	50.654	Seriola_lalandi_dorsalis
ENSSHAG00000006412	SMPD3	75	51.133	ENSSPAG00000007973	smpd5	89	51.133	Stegastes_partitus
ENSSHAG00000006412	SMPD3	76	48.408	ENSTRUG00000014862	smpd5	84	48.408	Takifugu_rubripes
ENSSHAG00000006412	SMPD3	75	49.515	ENSTNIG00000018420	smpd5	84	49.045	Tetraodon_nigroviridis
ENSSHAG00000006412	SMPD3	70	49.673	ENSXETG00000031246	-	90	49.673	Xenopus_tropicalis
ENSSHAG00000006412	SMPD3	99	68.997	ENSXETG00000006675	smpd3	99	68.997	Xenopus_tropicalis
ENSSHAG00000006412	SMPD3	88	41.791	ENSXCOG00000019783	smpd5	99	41.791	Xiphophorus_couchianus
ENSSHAG00000006412	SMPD3	89	43.896	ENSXMAG00000013998	smpd5	95	43.896	Xiphophorus_maculatus