EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006440 (Gene tree)
Gene ID: 100919286
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 17546 bases
Position: chrGL867601.1:230485-248030
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007409	RRM_1	PF00076.22	1.2e-17	1	2
ENSSHAP00000007409	RRM_1	PF00076.22	1.2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000007471	-	3044	-	ENSSHAP00000007409	386 (aa)	-	G3VW54

Gene Model

Click here to download ENSSHAG00000006440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006440	-	99	81.186	ENSSHAG00000018908	-	86	81.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006440	-	99	68.734	ENSG00000102241	HTATSF1	99	66.122	Homo_sapiens
ENSSHAG00000006440	-	97	64.935	ENSAPOG00000009823	htatsf1	85	65.455	Acanthochromis_polyacanthus
ENSSHAG00000006440	-	94	66.842	ENSACIG00000020459	htatsf1	86	65.985	Amphilophus_citrinellus
ENSSHAG00000006440	-	97	64.524	ENSAOCG00000020994	htatsf1	84	64.524	Amphiprion_ocellaris
ENSSHAG00000006440	-	97	64.524	ENSAPEG00000016432	htatsf1	84	64.524	Amphiprion_percula
ENSSHAG00000006440	-	99	65.491	ENSATEG00000008903	htatsf1	89	65.491	Anabas_testudineus
ENSSHAG00000006440	-	88	77.035	ENSAPLG00000012401	HTATSF1	85	76.504	Anas_platyrhynchos
ENSSHAG00000006440	-	83	72.477	ENSACAG00000009346	HTATSF1	83	72.477	Anolis_carolinensis
ENSSHAG00000006440	-	97	66.667	ENSACLG00000008096	htatsf1	86	66.158	Astatotilapia_calliptera
ENSSHAG00000006440	-	97	66.240	ENSAMXG00000008387	htatsf1	83	66.581	Astyanax_mexicanus
ENSSHAG00000006440	-	99	68.475	ENSBTAG00000055212	HTATSF1	50	68.475	Bos_taurus
ENSSHAG00000006440	-	97	67.105	ENSBTAG00000032711	HTATSF1	51	67.105	Bos_taurus
ENSSHAG00000006440	-	99	68.475	ENSBTAG00000054942	HTATSF1	50	68.475	Bos_taurus
ENSSHAG00000006440	-	85	39.583	WBGene00022025	Y65B4A.1	78	38.873	Caenorhabditis_elegans
ENSSHAG00000006440	-	97	69.816	ENSCJAG00000003676	HTATSF1	51	69.816	Callithrix_jacchus
ENSSHAG00000006440	-	99	68.041	ENSCAFG00000023294	HTATSF1	51	68.041	Canis_familiaris
ENSSHAG00000006440	-	99	68.041	ENSCAFG00020024635	HTATSF1	50	68.041	Canis_lupus_dingo
ENSSHAG00000006440	-	99	68.475	ENSCHIG00000000312	HTATSF1	51	68.475	Capra_hircus
ENSSHAG00000006440	-	100	68.205	ENSTSYG00000028876	HTATSF1	51	68.205	Carlito_syrichta
ENSSHAG00000006440	-	89	68.768	ENSCCAG00000025329	-	56	67.895	Cebus_capucinus
ENSSHAG00000006440	-	97	69.474	ENSCCAG00000022701	-	51	69.474	Cebus_capucinus
ENSSHAG00000006440	-	99	68.734	ENSCATG00000029963	HTATSF1	51	68.992	Cercocebus_atys
ENSSHAG00000006440	-	97	70.000	ENSCLAG00000002718	HTATSF1	50	70.000	Chinchilla_lanigera
ENSSHAG00000006440	-	99	68.734	ENSCSAG00000007505	HTATSF1	51	68.992	Chlorocebus_sabaeus
ENSSHAG00000006440	-	99	74.545	ENSCPBG00000026092	HTATSF1	85	74.545	Chrysemys_picta_bellii
ENSSHAG00000006440	-	96	46.974	ENSCING00000005914	-	83	47.110	Ciona_intestinalis
ENSSHAG00000006440	-	98	45.506	ENSCSAVG00000000371	-	91	45.506	Ciona_savignyi
ENSSHAG00000006440	-	99	68.734	ENSCANG00000028495	HTATSF1	51	68.734	Colobus_angolensis_palliatus
ENSSHAG00000006440	-	98	64.810	ENSCVAG00000014070	htatsf1	87	64.810	Cyprinodon_variegatus
ENSSHAG00000006440	-	97	66.492	ENSDARG00000056649	htatsf1	84	66.492	Danio_rerio
ENSSHAG00000006440	-	99	67.959	ENSDNOG00000002254	HTATSF1	50	67.959	Dasypus_novemcinctus
ENSSHAG00000006440	-	87	44.068	FBgn0037081	barc	62	45.404	Drosophila_melanogaster
ENSSHAG00000006440	-	95	44.142	ENSETEG00000006377	-	50	43.052	Echinops_telfairi
ENSSHAG00000006440	-	96	53.418	ENSEBUG00000001534	htatsf1	79	54.177	Eptatretus_burgeri
ENSSHAG00000006440	-	100	67.692	ENSEASG00005003440	HTATSF1	50	67.866	Equus_asinus_asinus
ENSSHAG00000006440	-	100	67.692	ENSECAG00000009156	HTATSF1	50	67.866	Equus_caballus
ENSSHAG00000006440	-	94	65.489	ENSELUG00000005486	htatsf1	73	67.391	Esox_lucius
ENSSHAG00000006440	-	99	67.268	ENSFCAG00000031924	HTATSF1	51	67.866	Felis_catus
ENSSHAG00000006440	-	91	76.816	ENSFALG00000003728	HTATSF1	86	72.292	Ficedula_albicollis
ENSSHAG00000006440	-	99	68.653	ENSFDAG00000008617	HTATSF1	51	68.653	Fukomys_damarensis
ENSSHAG00000006440	-	97	65.641	ENSFHEG00000020286	htatsf1	88	65.641	Fundulus_heteroclitus
ENSSHAG00000006440	-	89	66.000	ENSGMOG00000016444	htatsf1	97	66.000	Gadus_morhua
ENSSHAG00000006440	-	91	77.159	ENSGALG00000006410	HTATSF1	86	73.469	Gallus_gallus
ENSSHAG00000006440	-	94	66.402	ENSGAFG00000003041	htatsf1	85	65.553	Gambusia_affinis
ENSSHAG00000006440	-	97	64.416	ENSGACG00000020459	htatsf1	86	64.416	Gasterosteus_aculeatus
ENSSHAG00000006440	-	99	68.734	ENSGGOG00000026072	HTATSF1	51	68.734	Gorilla_gorilla
ENSSHAG00000006440	-	97	66.921	ENSHBUG00000004392	htatsf1	86	66.921	Haplochromis_burtoni
ENSSHAG00000006440	-	99	68.217	ENSHGLG00000005328	HTATSF1	51	68.217	Heterocephalus_glaber_female
ENSSHAG00000006440	-	97	63.144	ENSHCOG00000009056	htatsf1	89	63.144	Hippocampus_comes
ENSSHAG00000006440	-	97	67.112	ENSIPUG00000017828	htatsf1	80	67.380	Ictalurus_punctatus
ENSSHAG00000006440	-	99	67.959	ENSSTOG00000012505	HTATSF1	52	67.959	Ictidomys_tridecemlineatus
ENSSHAG00000006440	-	100	64.339	ENSKMAG00000007622	htatsf1	88	64.339	Kryptolebias_marmoratus
ENSSHAG00000006440	-	97	65.206	ENSLBEG00000001154	htatsf1	85	65.206	Labrus_bergylta
ENSSHAG00000006440	-	97	69.841	ENSLACG00000015989	HTATSF1	85	68.848	Latimeria_chalumnae
ENSSHAG00000006440	-	96	45.478	ENSLOCG00000015118	htatsf1	80	44.416	Lepisosteus_oculatus
ENSSHAG00000006440	-	99	68.041	ENSLAFG00000014307	HTATSF1	56	69.029	Loxodonta_africana
ENSSHAG00000006440	-	99	68.992	ENSMFAG00000044705	HTATSF1	51	69.251	Macaca_fascicularis
ENSSHAG00000006440	-	99	68.734	ENSMMUG00000006450	HTATSF1	51	68.734	Macaca_mulatta
ENSSHAG00000006440	-	99	68.734	ENSMNEG00000024084	HTATSF1	56	68.734	Macaca_nemestrina
ENSSHAG00000006440	-	99	68.992	ENSMLEG00000035511	HTATSF1	51	68.992	Mandrillus_leucophaeus
ENSSHAG00000006440	-	98	65.482	ENSMAMG00000021225	htatsf1	88	65.482	Mastacembelus_armatus
ENSSHAG00000006440	-	97	66.158	ENSMZEG00005000485	htatsf1	86	66.158	Maylandia_zebra
ENSSHAG00000006440	-	90	77.119	ENSMGAG00000003558	HTATSF1	85	76.164	Meleagris_gallopavo
ENSSHAG00000006440	-	99	68.734	ENSMAUG00000007235	Htatsf1	51	69.737	Mesocricetus_auratus
ENSSHAG00000006440	-	97	68.435	ENSMICG00000009348	HTATSF1	50	68.435	Microcebus_murinus
ENSSHAG00000006440	-	99	68.475	ENSMOCG00000023007	-	50	69.474	Microtus_ochrogaster
ENSSHAG00000006440	-	99	67.866	ENSMOCG00000022370	-	50	68.848	Microtus_ochrogaster
ENSSHAG00000006440	-	97	65.810	ENSMMOG00000011013	htatsf1	86	65.810	Mola_mola
ENSSHAG00000006440	-	99	83.029	ENSMODG00000014087	-	85	83.029	Monodelphis_domestica
ENSSHAG00000006440	-	62	76.016	ENSMODG00000000199	-	98	76.016	Monodelphis_domestica
ENSSHAG00000006440	-	94	64.286	ENSMALG00000019977	htatsf1	84	64.286	Monopterus_albus
ENSSHAG00000006440	-	99	69.330	MGP_CAROLIEiJ_G0033094	Htatsf1	51	70.341	Mus_caroli
ENSSHAG00000006440	-	99	69.072	ENSMUSG00000067873	Htatsf1	50	70.079	Mus_musculus
ENSSHAG00000006440	-	99	69.072	MGP_SPRETEiJ_G0034249	Htatsf1	50	70.079	Mus_spretus
ENSSHAG00000006440	-	99	68.299	ENSMPUG00000001901	HTATSF1	50	68.299	Mustela_putorius_furo
ENSSHAG00000006440	-	97	69.211	ENSMLUG00000028418	-	50	69.211	Myotis_lucifugus
ENSSHAG00000006440	-	97	69.271	ENSMLUG00000009234	-	52	69.271	Myotis_lucifugus
ENSSHAG00000006440	-	99	69.072	ENSNGAG00000017831	Htatsf1	51	70.079	Nannospalax_galili
ENSSHAG00000006440	-	97	66.412	ENSNBRG00000003818	htatsf1	86	66.412	Neolamprologus_brichardi
ENSSHAG00000006440	-	99	68.992	ENSNLEG00000002746	HTATSF1	51	68.992	Nomascus_leucogenys
ENSSHAG00000006440	-	97	80.577	ENSMEUG00000004133	-	91	80.526	Notamacropus_eugenii
ENSSHAG00000006440	-	94	66.230	ENSONIG00000008638	htatsf1	86	65.394	Oreochromis_niloticus
ENSSHAG00000006440	-	89	80.870	ENSOANG00000011674	-	84	80.870	Ornithorhynchus_anatinus
ENSSHAG00000006440	-	97	70.000	ENSOCUG00000012570	HTATSF1	50	70.000	Oryctolagus_cuniculus
ENSSHAG00000006440	-	94	66.931	ENSORLG00000002356	htatsf1	83	66.931	Oryzias_latipes
ENSSHAG00000006440	-	94	67.196	ENSORLG00020017818	htatsf1	79	67.196	Oryzias_latipes_hni
ENSSHAG00000006440	-	94	67.196	ENSORLG00015002268	htatsf1	83	67.196	Oryzias_latipes_hsok
ENSSHAG00000006440	-	94	66.138	ENSOMEG00000007564	htatsf1	83	66.138	Oryzias_melastigma
ENSSHAG00000006440	-	99	68.475	ENSOARG00000011215	-	50	68.475	Ovis_aries
ENSSHAG00000006440	-	99	65.891	ENSOARG00000000481	-	50	65.891	Ovis_aries
ENSSHAG00000006440	-	99	68.734	ENSPPAG00000024268	HTATSF1	51	68.734	Pan_paniscus
ENSSHAG00000006440	-	99	67.268	ENSPPRG00000014209	HTATSF1	51	67.866	Panthera_pardus
ENSSHAG00000006440	-	99	68.734	ENSPTRG00000044591	HTATSF1	51	68.734	Pan_troglodytes
ENSSHAG00000006440	-	97	66.310	ENSPKIG00000024852	htatsf1	83	66.310	Paramormyrops_kingsleyae
ENSSHAG00000006440	-	73	81.979	ENSPSIG00000010192	HTATSF1	80	81.979	Pelodiscus_sinensis
ENSSHAG00000006440	-	97	65.306	ENSPMGG00000006172	htatsf1	86	65.306	Periophthalmus_magnuspinnatus
ENSSHAG00000006440	-	99	69.251	ENSPEMG00000022397	Htatsf1	51	69.251	Peromyscus_maniculatus_bairdii
ENSSHAG00000006440	-	99	81.186	ENSPCIG00000030173	-	89	81.186	Phascolarctos_cinereus
ENSSHAG00000006440	-	99	84.252	ENSPCIG00000018896	-	86	84.252	Phascolarctos_cinereus
ENSSHAG00000006440	-	97	65.810	ENSPFOG00000007871	htatsf1	86	65.000	Poecilia_formosa
ENSSHAG00000006440	-	97	65.385	ENSPLAG00000007532	htatsf1	89	64.589	Poecilia_latipinna
ENSSHAG00000006440	-	97	65.810	ENSPMEG00000000352	htatsf1	89	65.000	Poecilia_mexicana
ENSSHAG00000006440	-	94	68.254	ENSPREG00000007811	htatsf1	89	65.915	Poecilia_reticulata
ENSSHAG00000006440	-	99	68.734	ENSPPYG00000020765	HTATSF1	51	68.734	Pongo_abelii
ENSSHAG00000006440	-	96	63.636	ENSPCAG00000010576	HTATSF1	52	63.636	Procavia_capensis
ENSSHAG00000006440	-	99	68.217	ENSPCOG00000021823	HTATSF1	51	68.217	Propithecus_coquereli
ENSSHAG00000006440	-	97	70.263	ENSPVAG00000010281	HTATSF1	54	70.263	Pteropus_vampyrus
ENSSHAG00000006440	-	97	66.158	ENSPNYG00000016693	htatsf1	86	66.158	Pundamilia_nyererei
ENSSHAG00000006440	-	97	67.380	ENSPNAG00000006166	htatsf1	85	66.667	Pygocentrus_nattereri
ENSSHAG00000006440	-	99	68.734	ENSRROG00000021939	HTATSF1	51	68.992	Rhinopithecus_roxellana
ENSSHAG00000006440	-	55	31.416	YNL286W	-	76	31.839	Saccharomyces_cerevisiae
ENSSHAG00000006440	-	97	69.737	ENSSBOG00000027186	-	51	69.737	Saimiri_boliviensis_boliviensis
ENSSHAG00000006440	-	94	69.780	ENSSFOG00015012002	htatsf1	79	69.780	Scleropages_formosus
ENSSHAG00000006440	-	94	67.647	ENSSMAG00000002970	htatsf1	82	67.647	Scophthalmus_maximus
ENSSHAG00000006440	-	93	64.973	ENSSDUG00000020002	htatsf1	87	64.324	Seriola_dumerili
ENSSHAG00000006440	-	97	65.810	ENSSLDG00000016880	htatsf1	86	66.324	Seriola_lalandi_dorsalis
ENSSHAG00000006440	-	98	65.714	ENSSARG00000005193	HTATSF1	53	65.714	Sorex_araneus
ENSSHAG00000006440	-	98	72.987	ENSSPUG00000014767	HTATSF1	86	72.379	Sphenodon_punctatus
ENSSHAG00000006440	-	97	66.067	ENSSPAG00000000732	htatsf1	84	66.067	Stegastes_partitus
ENSSHAG00000006440	-	97	69.496	ENSSSCG00000023062	HTATSF1	54	70.541	Sus_scrofa
ENSSHAG00000006440	-	93	75.616	ENSTGUG00000002099	HTATSF1	86	73.196	Taeniopygia_guttata
ENSSHAG00000006440	-	98	66.327	ENSTRUG00000013383	htatsf1	88	66.327	Takifugu_rubripes
ENSSHAG00000006440	-	98	66.837	ENSTNIG00000016140	htatsf1	88	66.582	Tetraodon_nigroviridis
ENSSHAG00000006440	-	88	71.637	ENSTTRG00000002269	HTATSF1	58	71.637	Tursiops_truncatus
ENSSHAG00000006440	-	99	68.123	ENSUAMG00000012048	HTATSF1	51	68.123	Ursus_americanus
ENSSHAG00000006440	-	99	68.123	ENSUMAG00000010393	HTATSF1	50	68.123	Ursus_maritimus
ENSSHAG00000006440	-	99	67.959	ENSVVUG00000024802	HTATSF1	50	67.959	Vulpes_vulpes
ENSSHAG00000006440	-	94	72.358	ENSXETG00000019749	htatsf1	70	72.358	Xenopus_tropicalis
ENSSHAG00000006440	-	97	68.182	ENSXCOG00000006912	htatsf1	87	68.182	Xiphophorus_couchianus
ENSSHAG00000006440	-	94	69.022	ENSXMAG00000000490	htatsf1	88	66.581	Xiphophorus_maculatus