EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006462 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 7691 bases
Position: chrGL834653.1:231982-239672
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007434	zf-C2H2	PF00096.26	4.2e-22	1	4
ENSSHAP00000007434	zf-C2H2	PF00096.26	4.2e-22	2	4
ENSSHAP00000007434	zf-C2H2	PF00096.26	4.2e-22	3	4
ENSSHAP00000007434	zf-C2H2	PF00096.26	4.2e-22	4	4
ENSSHAP00000007434	zf-met	PF12874.7	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000007496	GFI1B-201	1080	-	ENSSHAP00000007434	359 (aa)	-	G3VW79

Gene Model

Click here to download ENSSHAG00000006462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006462	GFI1B	60	34.969	ENSSHAG00000011347	ZNF668	83	34.969
ENSSHAG00000006462	GFI1B	56	36.000	ENSSHAG00000011906	-	60	36.000
ENSSHAG00000006462	GFI1B	81	33.962	ENSSHAG00000003090	-	80	33.962
ENSSHAG00000006462	GFI1B	66	38.532	ENSSHAG00000011714	-	57	38.532
ENSSHAG00000006462	GFI1B	56	36.500	ENSSHAG00000014216	-	74	36.500
ENSSHAG00000006462	GFI1B	61	33.333	ENSSHAG00000011015	SNAI1	59	31.298
ENSSHAG00000006462	GFI1B	67	30.806	ENSSHAG00000018106	-	69	30.806
ENSSHAG00000006462	GFI1B	56	40.411	ENSSHAG00000008255	ZNF768	63	40.411
ENSSHAG00000006462	GFI1B	57	33.679	ENSSHAG00000016096	-	96	30.400
ENSSHAG00000006462	GFI1B	57	30.732	ENSSHAG00000003250	PRDM5	65	31.472
ENSSHAG00000006462	GFI1B	56	36.735	ENSSHAG00000003284	-	66	36.735
ENSSHAG00000006462	GFI1B	63	35.678	ENSSHAG00000001415	-	92	35.678
ENSSHAG00000006462	GFI1B	57	30.986	ENSSHAG00000004205	SNAI2	54	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006462	GFI1B	100	47.945	ENSAPOG00000001296	gfi1b	100	47.945	Acanthochromis_polyacanthus
ENSSHAG00000006462	GFI1B	99	45.556	ENSACIG00000002190	gfi1b	99	45.556	Amphilophus_citrinellus
ENSSHAG00000006462	GFI1B	100	48.238	ENSAOCG00000021187	gfi1b	100	48.238	Amphiprion_ocellaris
ENSSHAG00000006462	GFI1B	100	49.311	ENSAPEG00000016196	gfi1b	100	49.311	Amphiprion_percula
ENSSHAG00000006462	GFI1B	100	48.925	ENSATEG00000002534	gfi1b	100	48.925	Anabas_testudineus
ENSSHAG00000006462	GFI1B	100	59.409	ENSAPLG00000003373	GFI1B	100	59.409	Anas_platyrhynchos
ENSSHAG00000006462	GFI1B	99	46.381	ENSACLG00000027053	gfi1b	99	46.381	Astatotilapia_calliptera
ENSSHAG00000006462	GFI1B	100	49.459	ENSAMXG00000037544	GFI1B	100	49.459	Astyanax_mexicanus
ENSSHAG00000006462	GFI1B	100	65.565	ENSCAPG00000010404	GFI1B	100	65.565	Cavia_aperea
ENSSHAG00000006462	GFI1B	100	57.560	ENSCPBG00000021186	GFI1B	100	57.560	Chrysemys_picta_bellii
ENSSHAG00000006462	GFI1B	100	48.098	ENSCSEG00000001315	gfi1b	100	48.098	Cynoglossus_semilaevis
ENSSHAG00000006462	GFI1B	100	49.861	ENSCVAG00000017168	gfi1b	100	49.861	Cyprinodon_variegatus
ENSSHAG00000006462	GFI1B	100	50.266	ENSDARG00000079947	gfi1b	97	60.526	Danio_rerio
ENSSHAG00000006462	GFI1B	70	69.027	ENSEEUG00000012609	-	75	69.027	Erinaceus_europaeus
ENSSHAG00000006462	GFI1B	100	50.134	ENSELUG00000016933	gfi1b	100	50.134	Esox_lucius
ENSSHAG00000006462	GFI1B	100	58.575	ENSFALG00000001479	GFI1B	100	58.575	Ficedula_albicollis
ENSSHAG00000006462	GFI1B	100	46.923	ENSFHEG00000015138	gfi1b	100	46.923	Fundulus_heteroclitus
ENSSHAG00000006462	GFI1B	74	58.364	ENSGMOG00000019123	gfi1b	88	58.364	Gadus_morhua
ENSSHAG00000006462	GFI1B	100	59.409	ENSGALG00000003478	GFI1B	100	59.409	Gallus_gallus
ENSSHAG00000006462	GFI1B	74	58.647	ENSGAFG00000003059	gfi1b	98	58.647	Gambusia_affinis
ENSSHAG00000006462	GFI1B	100	46.214	ENSGACG00000018134	gfi1b	100	46.214	Gasterosteus_aculeatus
ENSSHAG00000006462	GFI1B	100	59.189	ENSGAGG00000021327	GFI1B	100	59.189	Gopherus_agassizii
ENSSHAG00000006462	GFI1B	99	46.381	ENSHBUG00000005451	gfi1b	99	46.381	Haplochromis_burtoni
ENSSHAG00000006462	GFI1B	100	49.725	ENSHCOG00000013713	gfi1b	100	50.275	Hippocampus_comes
ENSSHAG00000006462	GFI1B	100	50.806	ENSIPUG00000012769	gfi1b	100	50.806	Ictalurus_punctatus
ENSSHAG00000006462	GFI1B	99	67.030	ENSJJAG00000016355	Gfi1b	100	67.030	Jaculus_jaculus
ENSSHAG00000006462	GFI1B	100	48.760	ENSKMAG00000016047	gfi1b	100	48.760	Kryptolebias_marmoratus
ENSSHAG00000006462	GFI1B	100	49.591	ENSLBEG00000020297	gfi1b	99	49.591	Labrus_bergylta
ENSSHAG00000006462	GFI1B	100	53.175	ENSLACG00000012207	GFI1B	100	53.175	Latimeria_chalumnae
ENSSHAG00000006462	GFI1B	74	61.049	ENSLOCG00000005750	gfi1b	70	61.049	Lepisosteus_oculatus
ENSSHAG00000006462	GFI1B	100	61.538	ENSLAFG00000022367	GFI1B	100	62.088	Loxodonta_africana
ENSSHAG00000006462	GFI1B	100	49.322	ENSMAMG00000003040	gfi1b	100	49.322	Mastacembelus_armatus
ENSSHAG00000006462	GFI1B	99	46.381	ENSMZEG00005015594	gfi1b	99	46.381	Maylandia_zebra
ENSSHAG00000006462	GFI1B	100	59.677	ENSMGAG00000006129	GFI1B	100	59.677	Meleagris_gallopavo
ENSSHAG00000006462	GFI1B	100	48.895	ENSMMOG00000011764	gfi1b	100	48.895	Mola_mola
ENSSHAG00000006462	GFI1B	100	77.437	ENSMODG00000012600	GFI1B	100	77.437	Monodelphis_domestica
ENSSHAG00000006462	GFI1B	100	48.936	ENSMALG00000004034	gfi1b	100	48.936	Monopterus_albus
ENSSHAG00000006462	GFI1B	99	69.890	ENSNGAG00000003333	Gfi1b	100	69.890	Nannospalax_galili
ENSSHAG00000006462	GFI1B	99	46.133	ENSNBRG00000012391	gfi1b	99	46.133	Neolamprologus_brichardi
ENSSHAG00000006462	GFI1B	56	43.452	ENSNBRG00000012376	-	99	43.452	Neolamprologus_brichardi
ENSSHAG00000006462	GFI1B	99	45.722	ENSONIG00000013011	gfi1b	100	58.986	Oreochromis_niloticus
ENSSHAG00000006462	GFI1B	100	59.677	ENSOANG00000014723	GFI1B	100	59.677	Ornithorhynchus_anatinus
ENSSHAG00000006462	GFI1B	100	77.193	ENSORLG00000014390	GFI1B	93	44.795	Oryzias_latipes
ENSSHAG00000006462	GFI1B	100	47.733	ENSORLG00020003719	GFI1B	100	47.733	Oryzias_latipes_hni
ENSSHAG00000006462	GFI1B	100	47.200	ENSORLG00015017142	gfi1b	100	47.200	Oryzias_latipes_hsok
ENSSHAG00000006462	GFI1B	100	47.297	ENSOMEG00000015149	GFI1B	100	47.684	Oryzias_melastigma
ENSSHAG00000006462	GFI1B	100	61.370	ENSOGAG00000008879	GFI1B	100	61.370	Otolemur_garnettii
ENSSHAG00000006462	GFI1B	100	49.333	ENSPKIG00000007643	gfi1b	100	49.333	Paramormyrops_kingsleyae
ENSSHAG00000006462	GFI1B	100	57.895	ENSPSIG00000012112	GFI1B	100	57.895	Pelodiscus_sinensis
ENSSHAG00000006462	GFI1B	99	48.641	ENSPMGG00000006021	gfi1b	99	48.641	Periophthalmus_magnuspinnatus
ENSSHAG00000006462	GFI1B	100	78.453	ENSPCIG00000019724	GFI1B	100	78.453	Phascolarctos_cinereus
ENSSHAG00000006462	GFI1B	100	47.906	ENSPFOG00000003460	gfi1b	100	47.906	Poecilia_formosa
ENSSHAG00000006462	GFI1B	100	48.329	ENSPLAG00000017181	GFI1B	100	48.329	Poecilia_latipinna
ENSSHAG00000006462	GFI1B	100	47.135	ENSPLAG00000021960	GFI1B	100	47.135	Poecilia_latipinna
ENSSHAG00000006462	GFI1B	100	46.875	ENSPMEG00000001556	GFI1B	100	46.875	Poecilia_mexicana
ENSSHAG00000006462	GFI1B	100	46.875	ENSPMEG00000019220	gfi1b	100	46.875	Poecilia_mexicana
ENSSHAG00000006462	GFI1B	100	47.396	ENSPREG00000021718	gfi1b	100	47.396	Poecilia_reticulata
ENSSHAG00000006462	GFI1B	99	47.411	ENSPNYG00000018422	gfi1b	99	47.411	Pundamilia_nyererei
ENSSHAG00000006462	GFI1B	100	50.543	ENSPNAG00000021118	gfi1b	100	50.543	Pygocentrus_nattereri
ENSSHAG00000006462	GFI1B	70	50.192	ENSSFOG00015011566	gfi1b	93	45.593	Scleropages_formosus
ENSSHAG00000006462	GFI1B	99	49.326	ENSSMAG00000015181	gfi1b	99	48.229	Scophthalmus_maximus
ENSSHAG00000006462	GFI1B	100	48.509	ENSSDUG00000011604	gfi1b	100	48.509	Seriola_dumerili
ENSSHAG00000006462	GFI1B	100	48.787	ENSSLDG00000013823	gfi1b	100	48.787	Seriola_lalandi_dorsalis
ENSSHAG00000006462	GFI1B	100	47.917	ENSSPUG00000016039	GFI1B	100	47.917	Sphenodon_punctatus
ENSSHAG00000006462	GFI1B	100	48.760	ENSSPAG00000022914	gfi1b	100	48.760	Stegastes_partitus
ENSSHAG00000006462	GFI1B	63	84.348	ENSTGUG00000005282	-	100	84.348	Taeniopygia_guttata
ENSSHAG00000006462	GFI1B	59	68.148	ENSTGUG00000015953	-	71	68.148	Taeniopygia_guttata
ENSSHAG00000006462	GFI1B	100	47.594	ENSTRUG00000004525	gfi1b	100	47.594	Takifugu_rubripes
ENSSHAG00000006462	GFI1B	100	47.838	ENSTNIG00000003834	gfi1b	100	47.838	Tetraodon_nigroviridis
ENSSHAG00000006462	GFI1B	91	58.986	ENSTBEG00000014459	GFI1B	83	58.986	Tupaia_belangeri
ENSSHAG00000006462	GFI1B	100	52.674	ENSXETG00000006263	gfi1b	100	52.368	Xenopus_tropicalis
ENSSHAG00000006462	GFI1B	100	47.396	ENSXMAG00000027589	gfi1b	100	47.396	Xiphophorus_maculatus