EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006590 (Gene tree)
Gene ID: 100925003
Gene Symbol: DDX23
Alias: PRPF28|SNRNP100|U5-100K|prp28
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 16433 bases
Position: chrGL849931.1:242422-258854
Accession: 100925003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007581	DEAD	PF00270.29	9.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000007644	DDX23-201	5155	-	ENSSHAP00000007581	818 (aa)	XP_003766366	G3VWM6

Gene Model

Click here to download ENSSHAG00000006590's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006590	DDX23	52	37.327	ENSSHAG00000014781	DDX59	63	37.850
ENSSHAG00000006590	DDX23	52	37.868	ENSSHAG00000007623	-	63	37.753
ENSSHAG00000006590	DDX23	52	39.070	ENSSHAG00000014005	-	65	38.837
ENSSHAG00000006590	DDX23	51	39.252	ENSSHAG00000004578	DDX17	61	39.713
ENSSHAG00000006590	DDX23	50	30.751	ENSSHAG00000015756	EIF4A1	92	30.751
ENSSHAG00000006590	DDX23	50	42.067	ENSSHAG00000016933	-	66	41.827
ENSSHAG00000006590	DDX23	52	35.499	ENSSHAG00000009132	DDX4	57	35.499
ENSSHAG00000006590	DDX23	50	40.338	ENSSHAG00000001847	-	60	40.338
ENSSHAG00000006590	DDX23	50	38.152	ENSSHAG00000012772	DDX5	57	38.152
ENSSHAG00000006590	DDX23	51	31.175	ENSSHAG00000011424	DDX6	77	31.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006590	DDX23	100	97.561	ENSG00000174243	DDX23	100	97.561	Homo_sapiens
ENSSHAG00000006590	DDX23	100	84.933	ENSAPOG00000003760	ddx23	90	90.220	Acanthochromis_polyacanthus
ENSSHAG00000006590	DDX23	100	97.439	ENSAMEG00000007123	DDX23	100	97.439	Ailuropoda_melanoleuca
ENSSHAG00000006590	DDX23	81	92.727	ENSACIG00000000022	ddx23	95	86.183	Amphilophus_citrinellus
ENSSHAG00000006590	DDX23	100	84.933	ENSAOCG00000017348	ddx23	90	90.220	Amphiprion_ocellaris
ENSSHAG00000006590	DDX23	100	85.470	ENSAPEG00000016857	ddx23	100	85.366	Amphiprion_percula
ENSSHAG00000006590	DDX23	100	84.371	ENSATEG00000016800	ddx23	100	84.146	Anabas_testudineus
ENSSHAG00000006590	DDX23	99	81.763	ENSAPLG00000002868	DDX23	99	83.575	Anas_platyrhynchos
ENSSHAG00000006590	DDX23	100	93.057	ENSACAG00000025589	DDX23	96	93.057	Anolis_carolinensis
ENSSHAG00000006590	DDX23	100	97.805	ENSANAG00000018663	DDX23	100	97.805	Aotus_nancymaae
ENSSHAG00000006590	DDX23	92	87.831	ENSAMXG00000017597	ddx23	100	84.249	Astyanax_mexicanus
ENSSHAG00000006590	DDX23	100	97.195	ENSBTAG00000021810	DDX23	100	97.195	Bos_taurus
ENSSHAG00000006590	DDX23	71	67.642	WBGene00017162	ddx-23	79	67.642	Caenorhabditis_elegans
ENSSHAG00000006590	DDX23	100	97.683	ENSCJAG00000020775	DDX23	100	97.683	Callithrix_jacchus
ENSSHAG00000006590	DDX23	100	97.683	ENSCAFG00000025422	DDX23	100	97.683	Canis_familiaris
ENSSHAG00000006590	DDX23	100	97.683	ENSCAFG00020013383	DDX23	100	97.683	Canis_lupus_dingo
ENSSHAG00000006590	DDX23	100	97.073	ENSCHIG00000018783	DDX23	100	97.073	Capra_hircus
ENSSHAG00000006590	DDX23	100	97.195	ENSTSYG00000005429	DDX23	100	97.195	Carlito_syrichta
ENSSHAG00000006590	DDX23	100	97.805	ENSCPOG00000003278	DDX23	100	97.805	Cavia_porcellus
ENSSHAG00000006590	DDX23	89	100.000	ENSCCAG00000029177	DDX23	100	100.000	Cebus_capucinus
ENSSHAG00000006590	DDX23	100	82.029	ENSCATG00000032335	-	100	79.340	Cercocebus_atys
ENSSHAG00000006590	DDX23	100	97.561	ENSCATG00000039797	DDX23	100	97.561	Cercocebus_atys
ENSSHAG00000006590	DDX23	100	97.683	ENSCLAG00000002986	DDX23	100	97.683	Chinchilla_lanigera
ENSSHAG00000006590	DDX23	100	97.561	ENSCSAG00000006240	DDX23	100	97.561	Chlorocebus_sabaeus
ENSSHAG00000006590	DDX23	84	97.238	ENSCHOG00000009027	DDX23	100	97.238	Choloepus_hoffmanni
ENSSHAG00000006590	DDX23	100	91.707	ENSCPBG00000019988	DDX23	100	91.707	Chrysemys_picta_bellii
ENSSHAG00000006590	DDX23	84	74.564	ENSCING00000001913	-	95	70.661	Ciona_intestinalis
ENSSHAG00000006590	DDX23	83	67.643	ENSCSAVG00000004158	-	100	67.643	Ciona_savignyi
ENSSHAG00000006590	DDX23	87	98.738	ENSCANG00000040182	DDX23	100	98.738	Colobus_angolensis_palliatus
ENSSHAG00000006590	DDX23	100	77.900	ENSCANG00000042510	-	100	77.045	Colobus_angolensis_palliatus
ENSSHAG00000006590	DDX23	100	97.317	ENSCGRG00001015090	Ddx23	100	97.317	Cricetulus_griseus_chok1gshd
ENSSHAG00000006590	DDX23	100	97.317	ENSCGRG00000016314	Ddx23	100	97.317	Cricetulus_griseus_crigri
ENSSHAG00000006590	DDX23	83	90.909	ENSCSEG00000020970	ddx23	90	88.567	Cynoglossus_semilaevis
ENSSHAG00000006590	DDX23	100	85.055	ENSCVAG00000015745	ddx23	90	90.496	Cyprinodon_variegatus
ENSSHAG00000006590	DDX23	83	91.924	ENSDARG00000021945	ddx23	90	88.950	Danio_rerio
ENSSHAG00000006590	DDX23	100	97.805	ENSDNOG00000043176	DDX23	100	97.805	Dasypus_novemcinctus
ENSSHAG00000006590	DDX23	100	97.561	ENSDORG00000012659	Ddx23	100	97.561	Dipodomys_ordii
ENSSHAG00000006590	DDX23	85	70.423	FBgn0032690	CG10333	86	70.282	Drosophila_melanogaster
ENSSHAG00000006590	DDX23	90	94.062	ENSETEG00000015816	DDX23	89	94.207	Echinops_telfairi
ENSSHAG00000006590	DDX23	87	78.541	ENSEBUG00000003319	ddx23	99	78.261	Eptatretus_burgeri
ENSSHAG00000006590	DDX23	100	97.439	ENSEASG00005000455	DDX23	100	97.439	Equus_asinus_asinus
ENSSHAG00000006590	DDX23	100	97.561	ENSECAG00000016681	DDX23	100	97.561	Equus_caballus
ENSSHAG00000006590	DDX23	100	89.781	ENSEEUG00000009658	DDX23	100	89.781	Erinaceus_europaeus
ENSSHAG00000006590	DDX23	100	82.488	ENSELUG00000015358	ddx23	100	81.364	Esox_lucius
ENSSHAG00000006590	DDX23	100	97.805	ENSFCAG00000000082	DDX23	100	97.805	Felis_catus
ENSSHAG00000006590	DDX23	100	91.463	ENSFALG00000000133	DDX23	100	90.366	Ficedula_albicollis
ENSSHAG00000006590	DDX23	100	97.805	ENSFDAG00000017059	DDX23	100	97.805	Fukomys_damarensis
ENSSHAG00000006590	DDX23	100	83.415	ENSFHEG00000017499	ddx23	90	91.818	Fundulus_heteroclitus
ENSSHAG00000006590	DDX23	95	84.076	ENSGMOG00000009592	ddx23	92	86.621	Gadus_morhua
ENSSHAG00000006590	DDX23	100	94.628	ENSGALG00000032307	DDX23	100	92.796	Gallus_gallus
ENSSHAG00000006590	DDX23	95	86.207	ENSGAFG00000012366	ddx23	90	89.684	Gambusia_affinis
ENSSHAG00000006590	DDX23	98	84.184	ENSGACG00000003024	ddx23	99	92.114	Gasterosteus_aculeatus
ENSSHAG00000006590	DDX23	100	91.585	ENSGAGG00000007790	DDX23	100	91.585	Gopherus_agassizii
ENSSHAG00000006590	DDX23	100	97.561	ENSGGOG00000015252	DDX23	100	100.000	Gorilla_gorilla
ENSSHAG00000006590	DDX23	100	84.493	ENSHBUG00000011876	ddx23	100	84.512	Haplochromis_burtoni
ENSSHAG00000006590	DDX23	100	97.439	ENSHGLG00000004292	DDX23	100	97.439	Heterocephalus_glaber_female
ENSSHAG00000006590	DDX23	100	97.439	ENSHGLG00100017585	DDX23	100	97.439	Heterocephalus_glaber_male
ENSSHAG00000006590	DDX23	83	92.229	ENSHCOG00000019338	ddx23	90	89.684	Hippocampus_comes
ENSSHAG00000006590	DDX23	92	87.384	ENSIPUG00000005247	DDX23	100	84.878	Ictalurus_punctatus
ENSSHAG00000006590	DDX23	100	98.049	ENSSTOG00000004219	DDX23	100	98.049	Ictidomys_tridecemlineatus
ENSSHAG00000006590	DDX23	100	97.195	ENSJJAG00000018994	Ddx23	100	97.195	Jaculus_jaculus
ENSSHAG00000006590	DDX23	100	82.734	ENSKMAG00000012060	ddx23	90	92.121	Kryptolebias_marmoratus
ENSSHAG00000006590	DDX23	93	87.859	ENSLBEG00000019475	ddx23	91	89.669	Labrus_bergylta
ENSSHAG00000006590	DDX23	92	92.123	ENSLACG00000016977	DDX23	96	93.103	Latimeria_chalumnae
ENSSHAG00000006590	DDX23	89	89.959	ENSLOCG00000007385	ddx23	100	86.951	Lepisosteus_oculatus
ENSSHAG00000006590	DDX23	100	97.561	ENSLAFG00000014227	DDX23	100	97.561	Loxodonta_africana
ENSSHAG00000006590	DDX23	100	97.561	ENSMFAG00000038666	DDX23	100	97.561	Macaca_fascicularis
ENSSHAG00000006590	DDX23	100	97.561	ENSMMUG00000008432	DDX23	100	100.000	Macaca_mulatta
ENSSHAG00000006590	DDX23	100	81.663	ENSMNEG00000045260	-	100	80.685	Macaca_nemestrina
ENSSHAG00000006590	DDX23	100	97.317	ENSMNEG00000040016	DDX23	100	97.317	Macaca_nemestrina
ENSSHAG00000006590	DDX23	100	79.707	ENSMLEG00000035096	-	90	83.734	Mandrillus_leucophaeus
ENSSHAG00000006590	DDX23	100	97.561	ENSMLEG00000042846	DDX23	100	97.561	Mandrillus_leucophaeus
ENSSHAG00000006590	DDX23	100	84.019	ENSMAMG00000024144	ddx23	90	90.069	Mastacembelus_armatus
ENSSHAG00000006590	DDX23	100	84.249	ENSMZEG00005026086	ddx23	100	84.268	Maylandia_zebra
ENSSHAG00000006590	DDX23	100	96.951	ENSMAUG00000012336	Ddx23	100	96.951	Mesocricetus_auratus
ENSSHAG00000006590	DDX23	100	96.944	ENSMICG00000017541	DDX23	100	96.944	Microcebus_murinus
ENSSHAG00000006590	DDX23	100	97.073	ENSMOCG00000018987	Ddx23	100	97.073	Microtus_ochrogaster
ENSSHAG00000006590	DDX23	95	81.946	ENSMMOG00000012406	ddx23	95	83.787	Mola_mola
ENSSHAG00000006590	DDX23	100	99.756	ENSMODG00000009975	DDX23	100	99.756	Monodelphis_domestica
ENSSHAG00000006590	DDX23	100	84.185	ENSMALG00000022366	ddx23	90	89.241	Monopterus_albus
ENSSHAG00000006590	DDX23	100	96.707	MGP_CAROLIEiJ_G0020240	Ddx23	100	96.707	Mus_caroli
ENSSHAG00000006590	DDX23	100	96.585	ENSMUSG00000003360	Ddx23	100	96.585	Mus_musculus
ENSSHAG00000006590	DDX23	100	96.463	MGP_PahariEiJ_G0020243	Ddx23	100	96.341	Mus_pahari
ENSSHAG00000006590	DDX23	100	96.585	MGP_SPRETEiJ_G0021137	Ddx23	100	96.585	Mus_spretus
ENSSHAG00000006590	DDX23	100	97.561	ENSMPUG00000014739	DDX23	100	97.561	Mustela_putorius_furo
ENSSHAG00000006590	DDX23	100	93.171	ENSMLUG00000003683	-	100	92.195	Myotis_lucifugus
ENSSHAG00000006590	DDX23	100	96.944	ENSMLUG00000011033	-	100	96.944	Myotis_lucifugus
ENSSHAG00000006590	DDX23	100	97.195	ENSNGAG00000019018	Ddx23	100	97.195	Nannospalax_galili
ENSSHAG00000006590	DDX23	83	92.679	ENSNBRG00000022928	ddx23	100	81.604	Neolamprologus_brichardi
ENSSHAG00000006590	DDX23	100	90.488	ENSNLEG00000017864	DDX23	100	90.488	Nomascus_leucogenys
ENSSHAG00000006590	DDX23	100	100.000	ENSMEUG00000009477	DDX23	100	100.000	Notamacropus_eugenii
ENSSHAG00000006590	DDX23	100	96.699	ENSOPRG00000007170	-	100	96.699	Ochotona_princeps
ENSSHAG00000006590	DDX23	100	97.683	ENSODEG00000003592	DDX23	100	97.683	Octodon_degus
ENSSHAG00000006590	DDX23	100	84.249	ENSONIG00000017048	ddx23	100	84.287	Oreochromis_niloticus
ENSSHAG00000006590	DDX23	100	97.195	ENSOCUG00000001414	DDX23	100	97.195	Oryctolagus_cuniculus
ENSSHAG00000006590	DDX23	100	83.496	ENSORLG00000012330	ddx23	90	88.000	Oryzias_latipes
ENSSHAG00000006590	DDX23	100	83.619	ENSORLG00020017586	ddx23	90	88.138	Oryzias_latipes_hni
ENSSHAG00000006590	DDX23	81	91.528	ENSORLG00015012361	ddx23	88	91.667	Oryzias_latipes_hsok
ENSSHAG00000006590	DDX23	100	84.102	ENSOMEG00000006453	ddx23	88	92.424	Oryzias_melastigma
ENSSHAG00000006590	DDX23	100	97.683	ENSOGAG00000016813	DDX23	100	97.683	Otolemur_garnettii
ENSSHAG00000006590	DDX23	100	97.073	ENSOARG00000019105	DDX23	90	97.073	Ovis_aries
ENSSHAG00000006590	DDX23	100	70.940	ENSPPAG00000038775	-	100	70.452	Pan_paniscus
ENSSHAG00000006590	DDX23	100	97.561	ENSPPAG00000037807	DDX23	100	100.000	Pan_paniscus
ENSSHAG00000006590	DDX23	100	97.805	ENSPPRG00000015345	DDX23	100	97.805	Panthera_pardus
ENSSHAG00000006590	DDX23	100	97.805	ENSPTIG00000018873	DDX23	100	97.805	Panthera_tigris_altaica
ENSSHAG00000006590	DDX23	100	74.756	ENSPTRG00000051972	-	100	73.472	Pan_troglodytes
ENSSHAG00000006590	DDX23	100	97.439	ENSPTRG00000004887	DDX23	100	100.000	Pan_troglodytes
ENSSHAG00000006590	DDX23	93	86.038	ENSPANG00000035074	-	100	86.038	Papio_anubis
ENSSHAG00000006590	DDX23	100	97.561	ENSPANG00000019459	DDX23	92	97.561	Papio_anubis
ENSSHAG00000006590	DDX23	89	89.163	ENSPKIG00000024110	ddx23	100	85.176	Paramormyrops_kingsleyae
ENSSHAG00000006590	DDX23	100	80.244	ENSPSIG00000002834	DDX23	91	86.382	Pelodiscus_sinensis
ENSSHAG00000006590	DDX23	100	80.220	ENSPMGG00000010243	ddx23	95	85.753	Periophthalmus_magnuspinnatus
ENSSHAG00000006590	DDX23	100	97.195	ENSPEMG00000011305	Ddx23	100	97.195	Peromyscus_maniculatus_bairdii
ENSSHAG00000006590	DDX23	83	84.919	ENSPMAG00000008625	ddx23	97	82.005	Petromyzon_marinus
ENSSHAG00000006590	DDX23	100	99.878	ENSPCIG00000027691	DDX23	100	99.878	Phascolarctos_cinereus
ENSSHAG00000006590	DDX23	87	90.603	ENSPFOG00000012159	ddx23	90	90.496	Poecilia_formosa
ENSSHAG00000006590	DDX23	95	86.968	ENSPLAG00000005052	ddx23	90	90.634	Poecilia_latipinna
ENSSHAG00000006590	DDX23	95	86.556	ENSPMEG00000015385	ddx23	90	90.496	Poecilia_mexicana
ENSSHAG00000006590	DDX23	95	87.039	ENSPREG00000007074	ddx23	90	90.371	Poecilia_reticulata
ENSSHAG00000006590	DDX23	100	97.561	ENSPPYG00000004468	DDX23	97	97.561	Pongo_abelii
ENSSHAG00000006590	DDX23	100	93.537	ENSPCAG00000002016	DDX23	100	93.537	Procavia_capensis
ENSSHAG00000006590	DDX23	100	97.561	ENSPCOG00000025915	DDX23	100	100.000	Propithecus_coquereli
ENSSHAG00000006590	DDX23	100	97.683	ENSPVAG00000009818	DDX23	100	97.683	Pteropus_vampyrus
ENSSHAG00000006590	DDX23	100	80.807	ENSPNYG00000021038	ddx23	100	82.075	Pundamilia_nyererei
ENSSHAG00000006590	DDX23	83	91.111	ENSPNAG00000019203	ddx23	89	92.273	Pygocentrus_nattereri
ENSSHAG00000006590	DDX23	100	96.707	ENSRNOG00000060154	Ddx23	100	96.707	Rattus_norvegicus
ENSSHAG00000006590	DDX23	100	84.512	ENSRBIG00000040362	DDX23	100	84.146	Rhinopithecus_bieti
ENSSHAG00000006590	DDX23	100	77.628	ENSRBIG00000036337	-	91	84.866	Rhinopithecus_bieti
ENSSHAG00000006590	DDX23	100	77.262	ENSRROG00000045747	-	94	83.471	Rhinopithecus_roxellana
ENSSHAG00000006590	DDX23	100	97.561	ENSRROG00000028964	DDX23	100	97.561	Rhinopithecus_roxellana
ENSSHAG00000006590	DDX23	70	37.245	YDR243C	-	81	38.848	Saccharomyces_cerevisiae
ENSSHAG00000006590	DDX23	100	97.683	ENSSBOG00000025799	DDX23	100	97.683	Saimiri_boliviensis_boliviensis
ENSSHAG00000006590	DDX23	89	89.793	ENSSFOG00015013273	ddx23	100	85.854	Scleropages_formosus
ENSSHAG00000006590	DDX23	100	83.455	ENSSMAG00000000529	ddx23	88	90.812	Scophthalmus_maximus
ENSSHAG00000006590	DDX23	100	85.122	ENSSDUG00000022459	ddx23	100	84.896	Seriola_dumerili
ENSSHAG00000006590	DDX23	100	85.122	ENSSLDG00000010453	ddx23	100	84.896	Seriola_lalandi_dorsalis
ENSSHAG00000006590	DDX23	93	100.000	ENSSARG00000004534	DDX23	93	100.000	Sorex_araneus
ENSSHAG00000006590	DDX23	100	94.411	ENSSPUG00000016044	DDX23	100	93.066	Sphenodon_punctatus
ENSSHAG00000006590	DDX23	100	84.005	ENSSPAG00000016482	ddx23	90	89.807	Stegastes_partitus
ENSSHAG00000006590	DDX23	100	97.317	ENSSSCG00000000176	DDX23	100	97.317	Sus_scrofa
ENSSHAG00000006590	DDX23	99	81.840	ENSTRUG00000000455	ddx23	92	87.758	Takifugu_rubripes
ENSSHAG00000006590	DDX23	100	93.659	ENSTBEG00000016909	DDX23	100	93.659	Tupaia_belangeri
ENSSHAG00000006590	DDX23	100	91.098	ENSTTRG00000004604	DDX23	100	91.098	Tursiops_truncatus
ENSSHAG00000006590	DDX23	100	97.561	ENSUAMG00000027082	DDX23	100	97.561	Ursus_americanus
ENSSHAG00000006590	DDX23	100	97.561	ENSUMAG00000006538	DDX23	100	97.561	Ursus_maritimus
ENSSHAG00000006590	DDX23	100	97.683	ENSVVUG00000019648	DDX23	100	97.683	Vulpes_vulpes
ENSSHAG00000006590	DDX23	100	84.841	ENSXETG00000009807	ddx23	100	84.963	Xenopus_tropicalis
ENSSHAG00000006590	DDX23	95	83.995	ENSXCOG00000011648	ddx23	92	88.797	Xiphophorus_couchianus
ENSSHAG00000006590	DDX23	95	86.845	ENSXMAG00000017387	ddx23	90	90.371	Xiphophorus_maculatus