EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSHAG00000006668 (Gene tree)
Gene ID
100918861
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
36863 bases
Position
chrGL841405.1:248837-285699
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000007676RRM_1PF00076.221.4e-3812
ENSSHAP00000007676RRM_1PF00076.221.4e-3822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000007739PUF60-2013683-ENSSHAP00000007676521 (aa)-G3VWX1
Gene Model
Click here to download ENSSHAG00000006668's gene model file
Pathways
Pathway IDPathway NameSource
shr03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006668's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000006668PUF609696.844ENSG00000179950PUF609996.707Homo_sapiens
ENSSHAG00000006668PUF609085.084ENSAPOG00000001713puf60b8985.084Acanthochromis_polyacanthus
ENSSHAG00000006668PUF609694.653ENSAMEG00000006406PUF609094.455Ailuropoda_melanoleuca
ENSSHAG00000006668PUF608876.774ENSACIG00000003263-8877.253Amphilophus_citrinellus
ENSSHAG00000006668PUF608984.861ENSACIG00000021705puf60b9084.861Amphilophus_citrinellus
ENSSHAG00000006668PUF609085.053ENSAOCG00000005395puf60b9085.928Amphiprion_ocellaris
ENSSHAG00000006668PUF608981.915ENSAOCG00000015558-8882.553Amphiprion_ocellaris
ENSSHAG00000006668PUF609078.992ENSAPEG00000011923puf60b8878.992Amphiprion_percula
ENSSHAG00000006668PUF608872.258ENSAPEG00000001836-8973.418Amphiprion_percula
ENSSHAG00000006668PUF609084.874ENSATEG00000001730puf60b8984.874Anabas_testudineus
ENSSHAG00000006668PUF608981.663ENSATEG00000006303-8882.090Anabas_testudineus
ENSSHAG00000006668PUF609097.660ENSAPLG00000010150PUF609097.660Anas_platyrhynchos
ENSSHAG00000006668PUF609095.551ENSACAG00000001645PUF608895.158Anolis_carolinensis
ENSSHAG00000006668PUF609696.282ENSANAG00000018626PUF609098.922Aotus_nancymaae
ENSSHAG00000006668PUF608984.861ENSACLG00000004462puf60b9084.861Astatotilapia_calliptera
ENSSHAG00000006668PUF609083.230ENSAMXG00000036570puf60a9080.120Astyanax_mexicanus
ENSSHAG00000006668PUF608875.574ENSAMXG00000041030puf60b8973.640Astyanax_mexicanus
ENSSHAG00000006668PUF609696.471ENSBTAG00000037493PUF609098.936Bos_taurus
ENSSHAG00000006668PUF606856.923WBGene00004389rnp-68351.485Caenorhabditis_elegans
ENSSHAG00000006668PUF609696.094ENSCJAG00000021485PUF608998.936Callithrix_jacchus
ENSSHAG00000006668PUF609695.661ENSCAFG00000001400PUF609195.661Canis_familiaris
ENSSHAG00000006668PUF609697.047ENSCAFG00020018754PUF608999.149Canis_lupus_dingo
ENSSHAG00000006668PUF609597.390ENSCHIG00000001618PUF608397.390Capra_hircus
ENSSHAG00000006668PUF609696.094ENSTSYG00000011912PUF609099.138Carlito_syrichta
ENSSHAG00000006668PUF609294.082ENSCPOG00000014613PUF608894.082Cavia_porcellus
ENSSHAG00000006668PUF609696.086ENSCCAG00000007744PUF608998.723Cebus_capucinus
ENSSHAG00000006668PUF609696.844ENSCATG00000035405PUF609196.844Cercocebus_atys
ENSSHAG00000006668PUF609696.289ENSCLAG00000009154PUF609196.289Chinchilla_lanigera
ENSSHAG00000006668PUF608998.707ENSCSAG00000008878PUF609098.707Chlorocebus_sabaeus
ENSSHAG00000006668PUF609097.660ENSCPBG00000005595PUF608997.660Chrysemys_picta_bellii
ENSSHAG00000006668PUF606359.882ENSCING00000002156-8759.882Ciona_intestinalis
ENSSHAG00000006668PUF609047.844ENSCING00000008436-8847.817Ciona_intestinalis
ENSSHAG00000006668PUF608655.889ENSCSAVG00000001385-7074.648Ciona_savignyi
ENSSHAG00000006668PUF608649.778ENSCSAVG00000004765-8549.111Ciona_savignyi
ENSSHAG00000006668PUF608693.805ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSSHAG00000006668PUF609695.508ENSCGRG00001017442Puf609195.508Cricetulus_griseus_chok1gshd
ENSSHAG00000006668PUF609595.437ENSCGRG00000003717Puf609095.437Cricetulus_griseus_crigri
ENSSHAG00000006668PUF608872.591ENSCSEG00000014845-7975.161Cynoglossus_semilaevis
ENSSHAG00000006668PUF609084.421ENSCSEG00000019887puf60b8384.211Cynoglossus_semilaevis
ENSSHAG00000006668PUF608079.147ENSCVAG00000001560-8778.860Cyprinodon_variegatus
ENSSHAG00000006668PUF608984.009ENSCVAG00000009386puf60b9085.288Cyprinodon_variegatus
ENSSHAG00000006668PUF608878.782ENSDARG00000001241puf60b9996.032Danio_rerio
ENSSHAG00000006668PUF608986.134ENSDARG00000032175puf60a9994.043Danio_rerio
ENSSHAG00000006668PUF609279.132ENSDNOG00000043278PUF608878.800Dasypus_novemcinctus
ENSSHAG00000006668PUF609597.194ENSDORG00000004585Puf609197.194Dipodomys_ordii
ENSSHAG00000006668PUF607761.661FBgn0028577hfp9044.379Drosophila_melanogaster
ENSSHAG00000006668PUF609059.779ENSEBUG00000014291puf60b7763.080Eptatretus_burgeri
ENSSHAG00000006668PUF608669.866ENSEBUG00000005470-7769.420Eptatretus_burgeri
ENSSHAG00000006668PUF609697.047ENSEASG00005009695PUF608999.149Equus_asinus_asinus
ENSSHAG00000006668PUF609597.006ENSECAG00000024681PUF608997.708Equus_caballus
ENSSHAG00000006668PUF609082.526ENSELUG00000006507puf60b9079.150Esox_lucius
ENSSHAG00000006668PUF609084.454ENSELUG00000018443-8884.454Esox_lucius
ENSSHAG00000006668PUF609695.898ENSFCAG00000001045PUF609098.707Felis_catus
ENSSHAG00000006668PUF609283.264ENSFALG00000001136PUF609084.519Ficedula_albicollis
ENSSHAG00000006668PUF609596.850ENSFDAG00000017177PUF609096.850Fukomys_damarensis
ENSSHAG00000006668PUF608479.638ENSFHEG00000021687PUF608980.046Fundulus_heteroclitus
ENSSHAG00000006668PUF609083.579ENSFHEG00000020046puf60b9085.714Fundulus_heteroclitus
ENSSHAG00000006668PUF609069.792ENSGMOG00000006392puf60b8968.958Gadus_morhua
ENSSHAG00000006668PUF606698.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSSHAG00000006668PUF609082.737ENSGAFG00000021040puf60b9085.075Gambusia_affinis
ENSSHAG00000006668PUF608880.087ENSGAFG00000004334-8978.710Gambusia_affinis
ENSSHAG00000006668PUF609071.698ENSGACG00000004717puf60b8970.947Gasterosteus_aculeatus
ENSSHAG00000006668PUF608771.903ENSGACG00000001484-8969.807Gasterosteus_aculeatus
ENSSHAG00000006668PUF609097.650ENSGAGG00000013289PUF608893.400Gopherus_agassizii
ENSSHAG00000006668PUF609696.844ENSGGOG00000004646PUF609196.844Gorilla_gorilla
ENSSHAG00000006668PUF608981.953ENSHBUG00000009634-8881.953Haplochromis_burtoni
ENSSHAG00000006668PUF609084.000ENSHBUG00000015118puf60b9084.861Haplochromis_burtoni
ENSSHAG00000006668PUF609596.850ENSHGLG00000006111PUF609096.850Heterocephalus_glaber_female
ENSSHAG00000006668PUF609596.850ENSHGLG00100012362PUF609096.850Heterocephalus_glaber_male
ENSSHAG00000006668PUF608981.263ENSHCOG00000015541puf60b9080.816Hippocampus_comes
ENSSHAG00000006668PUF608767.550ENSHCOG00000000378-8765.546Hippocampus_comes
ENSSHAG00000006668PUF609675.050ENSIPUG00000002453puf60a9081.551Ictalurus_punctatus
ENSSHAG00000006668PUF608878.151ENSIPUG00000004660puf60b8977.895Ictalurus_punctatus
ENSSHAG00000006668PUF609697.431ENSSTOG00000025037PUF609197.431Ictidomys_tridecemlineatus
ENSSHAG00000006668PUF609696.275ENSJJAG00000001076Puf609196.275Jaculus_jaculus
ENSSHAG00000006668PUF608977.149ENSKMAG00000010106-9074.380Kryptolebias_marmoratus
ENSSHAG00000006668PUF608984.435ENSKMAG00000016745puf60b9085.714Kryptolebias_marmoratus
ENSSHAG00000006668PUF609284.615ENSLBEG00000012505puf60b8784.615Labrus_bergylta
ENSSHAG00000006668PUF606990.909ENSLACG00000005456PUF609990.634Latimeria_chalumnae
ENSSHAG00000006668PUF609189.353ENSLOCG00000010106puf60b9088.309Lepisosteus_oculatus
ENSSHAG00000006668PUF609694.841ENSLAFG00000022929PUF609194.841Loxodonta_africana
ENSSHAG00000006668PUF609696.844ENSMFAG00000043373PUF609196.844Macaca_fascicularis
ENSSHAG00000006668PUF609696.654ENSMMUG00000013558PUF608998.723Macaca_mulatta
ENSSHAG00000006668PUF609696.844ENSMNEG00000031099PUF609196.844Macaca_nemestrina
ENSSHAG00000006668PUF608998.707ENSMLEG00000040009PUF609098.707Mandrillus_leucophaeus
ENSSHAG00000006668PUF609184.375ENSMAMG00000010394puf60b9083.023Mastacembelus_armatus
ENSSHAG00000006668PUF608983.227ENSMAMG00000019476-8882.590Mastacembelus_armatus
ENSSHAG00000006668PUF608981.953ENSMZEG00005019425-8881.953Maylandia_zebra
ENSSHAG00000006668PUF608984.861ENSMZEG00005018515puf60b9084.861Maylandia_zebra
ENSSHAG00000006668PUF609097.660ENSMGAG00000013070PUF609599.128Meleagris_gallopavo
ENSSHAG00000006668PUF609573.705ENSMAUG00000018549-8873.956Mesocricetus_auratus
ENSSHAG00000006668PUF607695.588ENSMAUG00000014267-10095.588Mesocricetus_auratus
ENSSHAG00000006668PUF609697.624ENSMICG00000012226PUF609197.624Microcebus_murinus
ENSSHAG00000006668PUF609695.703ENSMOCG00000018780Puf609195.703Microtus_ochrogaster
ENSSHAG00000006668PUF609072.553ENSMMOG00000018059-8676.963Mola_mola
ENSSHAG00000006668PUF608985.288ENSMMOG00000004217puf60b9085.288Mola_mola
ENSSHAG00000006668PUF609698.603ENSMODG00000009161PUF609198.603Monodelphis_domestica
ENSSHAG00000006668PUF608980.892ENSMALG00000000200-8879.325Monopterus_albus
ENSSHAG00000006668PUF609076.471ENSMALG00000006797puf60b8876.471Monopterus_albus
ENSSHAG00000006668PUF609695.703MGP_CAROLIEiJ_G0019910Puf609195.703Mus_caroli
ENSSHAG00000006668PUF609695.703ENSMUSG00000002524Puf609195.703Mus_musculus
ENSSHAG00000006668PUF609695.703MGP_PahariEiJ_G0019920Puf609195.703Mus_pahari
ENSSHAG00000006668PUF609695.703MGP_SPRETEiJ_G0020812Puf609195.703Mus_spretus
ENSSHAG00000006668PUF609597.189ENSMPUG00000008137PUF608897.189Mustela_putorius_furo
ENSSHAG00000006668PUF609596.586ENSMLUG00000000238-8996.586Myotis_lucifugus
ENSSHAG00000006668PUF609091.277ENSMLUG00000013032-8891.277Myotis_lucifugus
ENSSHAG00000006668PUF609695.898ENSNGAG00000000712Puf609098.707Nannospalax_galili
ENSSHAG00000006668PUF608184.235ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSSHAG00000006668PUF609378.958ENSNBRG00000017223-8882.128Neolamprologus_brichardi
ENSSHAG00000006668PUF609696.844ENSNLEG00000002156PUF609196.844Nomascus_leucogenys
ENSSHAG00000006668PUF606499.659ENSOPRG00000002147PUF606599.659Ochotona_princeps
ENSSHAG00000006668PUF608772.527ENSODEG00000015513-8869.520Octodon_degus
ENSSHAG00000006668PUF607295.619ENSODEG00000014024-9395.619Octodon_degus
ENSSHAG00000006668PUF609082.203ENSONIG00000014030-8881.780Oreochromis_niloticus
ENSSHAG00000006668PUF609084.034ENSONIG00000006247puf60b8984.034Oreochromis_niloticus
ENSSHAG00000006668PUF609076.160ENSOANG00000006962PUF609076.160Ornithorhynchus_anatinus
ENSSHAG00000006668PUF609084.211ENSORLG00000012279puf60b9084.435Oryzias_latipes
ENSSHAG00000006668PUF608878.647ENSORLG00000028655-8978.769Oryzias_latipes
ENSSHAG00000006668PUF609084.211ENSORLG00020007333puf609084.435Oryzias_latipes_hni
ENSSHAG00000006668PUF608978.526ENSORLG00020018144-8978.151Oryzias_latipes_hni
ENSSHAG00000006668PUF608978.814ENSORLG00015016833-8878.436Oryzias_latipes_hsok
ENSSHAG00000006668PUF609083.229ENSORLG00015007718puf60b9084.289Oryzias_latipes_hsok
ENSSHAG00000006668PUF609080.127ENSOMEG00000022185-8979.579Oryzias_melastigma
ENSSHAG00000006668PUF609081.687ENSOMEG00000001643puf60b8981.893Oryzias_melastigma
ENSSHAG00000006668PUF609597.395ENSOGAG00000006259PUF608997.395Otolemur_garnettii
ENSSHAG00000006668PUF609096.178ENSOARG00000016235PUF608996.178Ovis_aries
ENSSHAG00000006668PUF609696.844ENSPPAG00000029933PUF609196.844Pan_paniscus
ENSSHAG00000006668PUF609695.898ENSPPRG00000003257PUF609098.707Panthera_pardus
ENSSHAG00000006668PUF609593.000ENSPTIG00000009795PUF608996.170Panthera_tigris_altaica
ENSSHAG00000006668PUF609596.794ENSPTRG00000043963-9096.680Pan_troglodytes
ENSSHAG00000006668PUF609696.647ENSPTRG00000020670PUF609196.647Pan_troglodytes
ENSSHAG00000006668PUF609696.844ENSPANG00000021936PUF609196.844Papio_anubis
ENSSHAG00000006668PUF609086.076ENSPKIG00000012204puf60b9086.966Paramormyrops_kingsleyae
ENSSHAG00000006668PUF608986.047ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSSHAG00000006668PUF609097.877ENSPSIG00000004679PUF608997.877Pelodiscus_sinensis
ENSSHAG00000006668PUF608983.898ENSPMGG00000013444puf60b9083.898Periophthalmus_magnuspinnatus
ENSSHAG00000006668PUF609695.703ENSPEMG00000008820Puf609195.703Peromyscus_maniculatus_bairdii
ENSSHAG00000006668PUF609495.556ENSPCIG00000020270PUF608998.934Phascolarctos_cinereus
ENSSHAG00000006668PUF608881.641ENSPFOG00000011118-8781.505Poecilia_formosa
ENSSHAG00000006668PUF609083.579ENSPFOG00000019217puf60b8981.303Poecilia_formosa
ENSSHAG00000006668PUF609378.279ENSPLAG00000017025-8577.755Poecilia_latipinna
ENSSHAG00000006668PUF608984.435ENSPLAG00000010754puf60b9085.714Poecilia_latipinna
ENSSHAG00000006668PUF608881.641ENSPMEG00000009767-8181.505Poecilia_mexicana
ENSSHAG00000006668PUF609083.579ENSPMEG00000000838puf60b9085.714Poecilia_mexicana
ENSSHAG00000006668PUF609080.573ENSPREG00000005440puf60b8982.413Poecilia_reticulata
ENSSHAG00000006668PUF608097.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSSHAG00000006668PUF608099.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSSHAG00000006668PUF609696.660ENSPCOG00000027981PUF608998.936Propithecus_coquereli
ENSSHAG00000006668PUF6089100.000ENSPVAG00000016167PUF6071100.000Pteropus_vampyrus
ENSSHAG00000006668PUF608984.861ENSPNYG00000002556puf60b9084.861Pundamilia_nyererei
ENSSHAG00000006668PUF608981.953ENSPNYG00000004273-8881.953Pundamilia_nyererei
ENSSHAG00000006668PUF609075.636ENSPNAG00000019415puf60b8072.824Pygocentrus_nattereri
ENSSHAG00000006668PUF609081.303ENSPNAG00000019909puf60a8980.922Pygocentrus_nattereri
ENSSHAG00000006668PUF609695.508ENSRNOG00000009960Puf609195.508Rattus_norvegicus
ENSSHAG00000006668PUF609696.844ENSRBIG00000035274PUF609196.844Rhinopithecus_bieti
ENSSHAG00000006668PUF609696.844ENSRROG00000029360PUF609196.844Rhinopithecus_roxellana
ENSSHAG00000006668PUF609296.258ENSSBOG00000027089PUF608897.447Saimiri_boliviensis_boliviensis
ENSSHAG00000006668PUF608585.068ENSSFOG00015019619puf60b8885.068Scleropages_formosus
ENSSHAG00000006668PUF608486.517ENSSFOG00015019371puf60a8886.517Scleropages_formosus
ENSSHAG00000006668PUF606392.580ENSSMAG00000016381puf60b6392.580Scophthalmus_maximus
ENSSHAG00000006668PUF609082.716ENSSDUG00000009935puf60b9082.922Seriola_dumerili
ENSSHAG00000006668PUF608982.415ENSSDUG00000007048-8982.316Seriola_dumerili
ENSSHAG00000006668PUF608880.255ENSSLDG00000007366-8980.679Seriola_lalandi_dorsalis
ENSSHAG00000006668PUF609283.539ENSSLDG00000024011puf60b9083.230Seriola_lalandi_dorsalis
ENSSHAG00000006668PUF606685.260ENSSPUG00000013518PUF609485.260Sphenodon_punctatus
ENSSHAG00000006668PUF608882.618ENSSPAG00000020285-8983.120Stegastes_partitus
ENSSHAG00000006668PUF609082.004ENSSPAG00000012144puf60b9083.437Stegastes_partitus
ENSSHAG00000006668PUF609596.794ENSSSCG00000038800PUF608894.894Sus_scrofa
ENSSHAG00000006668PUF609094.043ENSTGUG00000012797-9094.043Taeniopygia_guttata
ENSSHAG00000006668PUF609083.613ENSTRUG00000005420puf60b9081.988Takifugu_rubripes
ENSSHAG00000006668PUF608877.826ENSTRUG00000008843-8877.826Takifugu_rubripes
ENSSHAG00000006668PUF609083.613ENSTNIG00000013675puf60b9083.403Tetraodon_nigroviridis
ENSSHAG00000006668PUF609078.298ENSTNIG00000003069-8978.298Tetraodon_nigroviridis
ENSSHAG00000006668PUF607579.240ENSTBEG00000001899-9980.409Tupaia_belangeri
ENSSHAG00000006668PUF606196.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSSHAG00000006668PUF608998.276ENSTTRG00000017088PUF609098.276Tursiops_truncatus
ENSSHAG00000006668PUF609697.431ENSUAMG00000024917PUF609197.431Ursus_americanus
ENSSHAG00000006668PUF609293.291ENSUMAG00000000272PUF608798.990Ursus_maritimus
ENSSHAG00000006668PUF609597.595ENSVVUG00000022527PUF609099.138Vulpes_vulpes
ENSSHAG00000006668PUF609193.432ENSXETG00000012469puf608993.432Xenopus_tropicalis
ENSSHAG00000006668PUF608980.810ENSXCOG00000012355puf60b9082.090Xiphophorus_couchianus
ENSSHAG00000006668PUF609083.579ENSXMAG00000001862puf60b9085.714Xiphophorus_maculatus
ENSSHAG00000006668PUF609078.465ENSXMAG00000010507-8877.612Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us