EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006816 (Gene tree)
Gene ID: 100920617
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 18980 bases
Position: chrGL841425.1:261102-280081
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007854	MMR_HSR1	PF01926.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000007917	-	657	-	ENSSHAP00000007854	218 (aa)	-	G3VXE9

Gene Model

Click here to download ENSSHAG00000006816's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr04144	Endocytosis	KEGG
shr04152	AMPK signaling pathway	KEGG
shr04962	Vasopressin-regulated water reabsorption	KEGG
shr05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006816	-	87	35.263	ENSSHAG00000006379	RAB23	85	35.294
ENSSHAG00000006816	-	71	40.000	ENSSHAG00000016787	RAB7A	77	40.000
ENSSHAG00000006816	-	72	43.312	ENSSHAG00000016302	RAB22A	81	43.312
ENSSHAG00000006816	-	60	30.534	ENSSHAG00000016060	RRAS2	75	30.534
ENSSHAG00000006816	-	74	40.994	ENSSHAG00000006085	RAB31	83	40.994
ENSSHAG00000006816	-	94	40.580	ENSSHAG00000006787	RAB5A	91	40.580
ENSSHAG00000006816	-	96	37.736	ENSSHAG00000018081	RAB30	97	37.736
ENSSHAG00000006816	-	95	46.479	ENSSHAG00000013149	-	99	46.479
ENSSHAG00000006816	-	81	37.989	ENSSHAG00000008520	-	81	37.989
ENSSHAG00000006816	-	78	32.353	ENSSHAG00000017856	-	82	32.353
ENSSHAG00000006816	-	75	43.902	ENSSHAG00000009306	RAB17	77	43.902
ENSSHAG00000006816	-	83	42.541	ENSSHAG00000013263	RAB15	85	42.541
ENSSHAG00000006816	-	89	36.410	ENSSHAG00000007153	RAB3D	85	36.410
ENSSHAG00000006816	-	74	46.914	ENSSHAG00000007613	RAB18	79	46.914
ENSSHAG00000006816	-	67	31.447	ENSSHAG00000013950	-	80	31.447
ENSSHAG00000006816	-	97	60.094	ENSSHAG00000013327	RAB25	97	60.094
ENSSHAG00000006816	-	94	45.854	ENSSHAG00000010376	-	96	45.854
ENSSHAG00000006816	-	76	45.455	ENSSHAG00000011866	-	81	45.455
ENSSHAG00000006816	-	72	31.013	ENSSHAG00000009032	MRAS	81	32.353
ENSSHAG00000006816	-	68	34.000	ENSSHAG00000006631	KRAS	81	34.568
ENSSHAG00000006816	-	77	52.695	ENSSHAG00000017800	RAB14	78	52.695
ENSSHAG00000006816	-	94	42.029	ENSSHAG00000005267	-	90	42.029
ENSSHAG00000006816	-	94	41.827	ENSSHAG00000007727	RAB5B	91	41.827
ENSSHAG00000006816	-	78	39.429	ENSSHAG00000012788	RAB9B	87	39.429
ENSSHAG00000006816	-	98	86.854	ENSSHAG00000006622	RAB11A	98	86.854
ENSSHAG00000006816	-	75	32.121	ENSSHAG00000001457	-	85	32.121
ENSSHAG00000006816	-	80	48.276	ENSSHAG00000003597	RAB1A	83	48.276
ENSSHAG00000006816	-	75	42.073	ENSSHAG00000001489	RAB12	73	42.073
ENSSHAG00000006816	-	72	36.306	ENSSHAG00000006833	-	95	36.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006816	-	97	96.226	ENSAPOG00000023455	rab11bb	97	96.226	Acanthochromis_polyacanthus
ENSSHAG00000006816	-	97	96.698	ENSACIG00000024376	-	97	96.698	Amphilophus_citrinellus
ENSSHAG00000006816	-	97	83.491	ENSACIG00000019631	rab11bb	97	83.491	Amphilophus_citrinellus
ENSSHAG00000006816	-	97	96.226	ENSAOCG00000018239	rab11bb	97	96.226	Amphiprion_ocellaris
ENSSHAG00000006816	-	97	96.698	ENSAOCG00000018849	-	97	96.698	Amphiprion_ocellaris
ENSSHAG00000006816	-	97	96.226	ENSAPEG00000016590	rab11bb	97	96.226	Amphiprion_percula
ENSSHAG00000006816	-	97	96.226	ENSATEG00000023725	-	97	96.226	Anabas_testudineus
ENSSHAG00000006816	-	97	96.226	ENSATEG00000017696	rab11bb	97	96.226	Anabas_testudineus
ENSSHAG00000006816	-	95	98.571	ENSAPLG00000011046	-	96	98.571	Anas_platyrhynchos
ENSSHAG00000006816	-	97	96.698	ENSACLG00000005446	-	97	96.698	Astatotilapia_calliptera
ENSSHAG00000006816	-	97	96.226	ENSACLG00000007076	rab11bb	97	96.226	Astatotilapia_calliptera
ENSSHAG00000006816	-	97	97.642	ENSAMXG00000042655	rab11bb	97	97.642	Astyanax_mexicanus
ENSSHAG00000006816	-	97	95.755	ENSAMXG00000037623	-	97	95.755	Astyanax_mexicanus
ENSSHAG00000006816	-	97	96.698	ENSBTAG00000002475	RAB11B	97	96.698	Bos_taurus
ENSSHAG00000006816	-	94	98.049	ENSCHIG00000022426	-	92	98.049	Capra_hircus
ENSSHAG00000006816	-	97	96.698	ENSCATG00000029188	-	97	96.698	Cercocebus_atys
ENSSHAG00000006816	-	97	98.113	ENSCPBG00000017056	-	97	98.113	Chrysemys_picta_bellii
ENSSHAG00000006816	-	97	96.226	ENSCSEG00000007239	-	97	96.226	Cynoglossus_semilaevis
ENSSHAG00000006816	-	97	96.226	ENSCSEG00000012149	rab11bb	97	96.226	Cynoglossus_semilaevis
ENSSHAG00000006816	-	97	93.396	ENSCVAG00000019751	-	97	93.396	Cyprinodon_variegatus
ENSSHAG00000006816	-	97	96.226	ENSCVAG00000017021	-	97	96.226	Cyprinodon_variegatus
ENSSHAG00000006816	-	97	95.755	ENSCVAG00000019718	-	97	95.755	Cyprinodon_variegatus
ENSSHAG00000006816	-	97	97.642	ENSDARG00000090086	rab11bb	97	97.642	Danio_rerio
ENSSHAG00000006816	-	97	96.209	ENSETEG00000000905	-	97	96.209	Echinops_telfairi
ENSSHAG00000006816	-	94	97.561	ENSEASG00005003708	-	94	97.561	Equus_asinus_asinus
ENSSHAG00000006816	-	94	97.561	ENSECAG00000000716	RAB11B	94	97.561	Equus_caballus
ENSSHAG00000006816	-	97	95.283	ENSELUG00000000916	-	97	95.283	Esox_lucius
ENSSHAG00000006816	-	97	95.755	ENSELUG00000020948	-	97	95.755	Esox_lucius
ENSSHAG00000006816	-	97	96.226	ENSELUG00000021148	rab11bb	97	96.226	Esox_lucius
ENSSHAG00000006816	-	97	98.113	ENSFALG00000011828	-	97	98.113	Ficedula_albicollis
ENSSHAG00000006816	-	97	96.226	ENSFHEG00000018353	rab11bb	97	96.226	Fundulus_heteroclitus
ENSSHAG00000006816	-	97	96.226	ENSFHEG00000022676	-	97	96.226	Fundulus_heteroclitus
ENSSHAG00000006816	-	97	96.226	ENSGMOG00000009211	rab11bb	97	96.226	Gadus_morhua
ENSSHAG00000006816	-	96	92.381	ENSGMOG00000009668	-	96	92.381	Gadus_morhua
ENSSHAG00000006816	-	97	98.113	ENSGALG00000000613	RAB11B	97	98.113	Gallus_gallus
ENSSHAG00000006816	-	97	96.226	ENSGAFG00000007102	rab11bb	97	96.226	Gambusia_affinis
ENSSHAG00000006816	-	97	95.755	ENSGACG00000015479	rab11bb	97	95.755	Gasterosteus_aculeatus
ENSSHAG00000006816	-	97	93.396	ENSGACG00000013297	-	96	93.396	Gasterosteus_aculeatus
ENSSHAG00000006816	-	99	94.931	ENSGGOG00000014516	RAB11B	97	96.698	Gorilla_gorilla
ENSSHAG00000006816	-	97	96.226	ENSHBUG00000014777	rab11bb	97	96.226	Haplochromis_burtoni
ENSSHAG00000006816	-	97	96.698	ENSHBUG00000009947	-	97	96.698	Haplochromis_burtoni
ENSSHAG00000006816	-	97	91.509	ENSHCOG00000000985	-	97	91.509	Hippocampus_comes
ENSSHAG00000006816	-	97	96.698	ENSHCOG00000002423	rab11bb	97	96.698	Hippocampus_comes
ENSSHAG00000006816	-	97	93.868	ENSHCOG00000000954	-	97	95.588	Hippocampus_comes
ENSSHAG00000006816	-	97	97.170	ENSIPUG00000019927	rab11bb	97	97.170	Ictalurus_punctatus
ENSSHAG00000006816	-	97	96.226	ENSIPUG00000025100	rab11b	97	96.226	Ictalurus_punctatus
ENSSHAG00000006816	-	97	96.698	ENSKMAG00000006170	-	97	96.698	Kryptolebias_marmoratus
ENSSHAG00000006816	-	97	96.226	ENSKMAG00000009033	rab11bb	97	96.226	Kryptolebias_marmoratus
ENSSHAG00000006816	-	97	95.755	ENSLBEG00000015248	rab11bb	97	95.755	Labrus_bergylta
ENSSHAG00000006816	-	97	96.226	ENSLBEG00000004172	-	97	96.226	Labrus_bergylta
ENSSHAG00000006816	-	97	88.679	ENSLBEG00000005981	-	97	88.679	Labrus_bergylta
ENSSHAG00000006816	-	97	98.113	ENSLACG00000016857	-	97	98.113	Latimeria_chalumnae
ENSSHAG00000006816	-	97	96.698	ENSMFAG00000003654	RAB11B	97	96.698	Macaca_fascicularis
ENSSHAG00000006816	-	97	96.698	ENSMLEG00000030601	-	97	96.698	Mandrillus_leucophaeus
ENSSHAG00000006816	-	97	95.283	ENSMAMG00000018533	-	97	95.283	Mastacembelus_armatus
ENSSHAG00000006816	-	97	95.755	ENSMAMG00000006378	rab11bb	97	95.755	Mastacembelus_armatus
ENSSHAG00000006816	-	97	96.226	ENSMZEG00005003352	rab11bb	97	96.226	Maylandia_zebra
ENSSHAG00000006816	-	97	96.698	ENSMZEG00005010975	-	97	96.698	Maylandia_zebra
ENSSHAG00000006816	-	97	96.698	ENSMICG00000034065	-	97	96.698	Microcebus_murinus
ENSSHAG00000006816	-	97	94.313	ENSMMOG00000001238	-	97	94.313	Mola_mola
ENSSHAG00000006816	-	97	96.698	ENSMMOG00000001250	-	97	96.698	Mola_mola
ENSSHAG00000006816	-	94	98.049	ENSMMOG00000007917	rab11bb	100	98.049	Mola_mola
ENSSHAG00000006816	-	97	98.113	ENSMODG00000003841	-	97	98.113	Monodelphis_domestica
ENSSHAG00000006816	-	97	96.226	ENSMALG00000022187	rab11bb	97	96.226	Monopterus_albus
ENSSHAG00000006816	-	94	89.372	ENSMLUG00000006677	-	100	89.372	Myotis_lucifugus
ENSSHAG00000006816	-	97	96.698	ENSNBRG00000023885	-	97	96.698	Neolamprologus_brichardi
ENSSHAG00000006816	-	97	96.226	ENSNBRG00000000372	rab11bb	97	96.226	Neolamprologus_brichardi
ENSSHAG00000006816	-	97	98.113	ENSMEUG00000003686	-	97	98.113	Notamacropus_eugenii
ENSSHAG00000006816	-	97	96.698	ENSONIG00000002544	-	97	96.698	Oreochromis_niloticus
ENSSHAG00000006816	-	97	96.226	ENSONIG00000010435	rab11bb	97	96.226	Oreochromis_niloticus
ENSSHAG00000006816	-	52	97.368	ENSOANG00000031567	-	82	97.368	Ornithorhynchus_anatinus
ENSSHAG00000006816	-	97	94.787	ENSORLG00000015284	-	70	94.787	Oryzias_latipes
ENSSHAG00000006816	-	97	95.755	ENSORLG00000013938	rab11bb	97	95.755	Oryzias_latipes
ENSSHAG00000006816	-	97	95.755	ENSORLG00020019393	rab11bb	97	95.755	Oryzias_latipes_hni
ENSSHAG00000006816	-	97	94.787	ENSORLG00020020844	RAB11B	97	94.787	Oryzias_latipes_hni
ENSSHAG00000006816	-	97	95.755	ENSORLG00015020173	rab11bb	97	95.755	Oryzias_latipes_hsok
ENSSHAG00000006816	-	97	94.787	ENSORLG00015016999	RAB11B	97	94.787	Oryzias_latipes_hsok
ENSSHAG00000006816	-	97	96.226	ENSOMEG00000017806	-	97	96.226	Oryzias_melastigma
ENSSHAG00000006816	-	97	95.755	ENSOMEG00000002562	-	97	95.755	Oryzias_melastigma
ENSSHAG00000006816	-	99	94.931	ENSPPAG00000028589	-	97	96.698	Pan_paniscus
ENSSHAG00000006816	-	99	94.931	ENSPTRG00000010422	RAB11B	97	96.698	Pan_troglodytes
ENSSHAG00000006816	-	97	96.698	ENSPANG00000007765	-	97	96.698	Papio_anubis
ENSSHAG00000006816	-	97	96.698	ENSPKIG00000011703	-	97	96.698	Paramormyrops_kingsleyae
ENSSHAG00000006816	-	95	96.154	ENSPKIG00000001389	-	67	96.154	Paramormyrops_kingsleyae
ENSSHAG00000006816	-	97	96.226	ENSPKIG00000011640	rab11bb	97	96.226	Paramormyrops_kingsleyae
ENSSHAG00000006816	-	95	96.244	ENSPSIG00000010242	-	83	96.244	Pelodiscus_sinensis
ENSSHAG00000006816	-	97	96.226	ENSPMGG00000009435	rab11bb	97	96.226	Periophthalmus_magnuspinnatus
ENSSHAG00000006816	-	97	91.943	ENSPMGG00000014336	-	97	91.943	Periophthalmus_magnuspinnatus
ENSSHAG00000006816	-	97	94.811	ENSPMGG00000014333	-	97	94.811	Periophthalmus_magnuspinnatus
ENSSHAG00000006816	-	98	99.533	ENSPCIG00000020371	-	99	99.533	Phascolarctos_cinereus
ENSSHAG00000006816	-	97	96.698	ENSPFOG00000006224	-	97	96.698	Poecilia_formosa
ENSSHAG00000006816	-	97	96.226	ENSPFOG00000024114	-	97	96.226	Poecilia_formosa
ENSSHAG00000006816	-	97	96.698	ENSPLAG00000014207	-	97	96.698	Poecilia_latipinna
ENSSHAG00000006816	-	97	96.226	ENSPLAG00000001598	rab11bb	97	96.226	Poecilia_latipinna
ENSSHAG00000006816	-	97	96.226	ENSPMEG00000012389	rab11bb	97	96.226	Poecilia_mexicana
ENSSHAG00000006816	-	97	96.698	ENSPMEG00000007842	-	97	96.698	Poecilia_mexicana
ENSSHAG00000006816	-	97	96.226	ENSPREG00000014269	rab11bb	97	96.226	Poecilia_reticulata
ENSSHAG00000006816	-	97	96.226	ENSPREG00000006336	-	97	96.226	Poecilia_reticulata
ENSSHAG00000006816	-	97	96.698	ENSPNYG00000019611	-	97	96.698	Pundamilia_nyererei
ENSSHAG00000006816	-	97	96.226	ENSPNYG00000004098	rab11bb	97	96.226	Pundamilia_nyererei
ENSSHAG00000006816	-	98	96.244	ENSRROG00000037812	-	97	96.698	Rhinopithecus_roxellana
ENSSHAG00000006816	-	97	71.698	ENSSFOG00015006245	-	97	71.698	Scleropages_formosus
ENSSHAG00000006816	-	97	96.698	ENSSFOG00015009042	rab11bb	97	96.698	Scleropages_formosus
ENSSHAG00000006816	-	97	95.755	ENSSMAG00000004922	rab11bb	97	95.755	Scophthalmus_maximus
ENSSHAG00000006816	-	97	92.925	ENSSMAG00000018613	-	97	92.925	Scophthalmus_maximus
ENSSHAG00000006816	-	97	96.698	ENSSDUG00000002934	-	97	96.698	Seriola_dumerili
ENSSHAG00000006816	-	97	96.226	ENSSDUG00000013558	rab11bb	97	96.226	Seriola_dumerili
ENSSHAG00000006816	-	97	96.226	ENSSLDG00000020676	rab11bb	97	96.226	Seriola_lalandi_dorsalis
ENSSHAG00000006816	-	97	96.698	ENSSLDG00000005275	-	97	96.698	Seriola_lalandi_dorsalis
ENSSHAG00000006816	-	97	97.642	ENSSPUG00000002243	-	97	97.642	Sphenodon_punctatus
ENSSHAG00000006816	-	97	96.698	ENSSPAG00000014559	-	97	96.698	Stegastes_partitus
ENSSHAG00000006816	-	97	96.226	ENSSPAG00000011419	rab11bb	97	96.226	Stegastes_partitus
ENSSHAG00000006816	-	97	98.113	ENSTGUG00000000084	-	97	98.113	Taeniopygia_guttata
ENSSHAG00000006816	-	97	96.226	ENSTRUG00000022029	rab11bb	97	96.226	Takifugu_rubripes
ENSSHAG00000006816	-	97	93.365	ENSTRUG00000021614	-	97	93.365	Takifugu_rubripes
ENSSHAG00000006816	-	96	96.667	ENSTRUG00000021619	-	97	96.667	Takifugu_rubripes
ENSSHAG00000006816	-	97	95.283	ENSTNIG00000011081	rab11bb	97	95.283	Tetraodon_nigroviridis
ENSSHAG00000006816	-	96	96.667	ENSTNIG00000013182	-	97	96.667	Tetraodon_nigroviridis
ENSSHAG00000006816	-	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSSHAG00000006816	-	97	92.891	ENSTNIG00000013184	-	97	92.891	Tetraodon_nigroviridis
ENSSHAG00000006816	-	94	98.537	ENSUAMG00000006639	-	99	98.537	Ursus_americanus
ENSSHAG00000006816	-	97	97.183	ENSXETG00000025484	rab11b.1	96	97.183	Xenopus_tropicalis
ENSSHAG00000006816	-	97	96.226	ENSXCOG00000008042	-	97	96.226	Xiphophorus_couchianus
ENSSHAG00000006816	-	97	96.698	ENSXCOG00000009190	-	97	96.698	Xiphophorus_couchianus
ENSSHAG00000006816	-	97	96.226	ENSXMAG00000024840	-	97	96.226	Xiphophorus_maculatus
ENSSHAG00000006816	-	97	96.226	ENSXMAG00000011926	rab11bb	97	96.226	Xiphophorus_maculatus