EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000006906 (Gene tree)
Gene ID: 100924137
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 10892 bases
Position: chrGL856722.1:269108-279999
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000007959	PRP38	PF03371.15	2.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000008023	-	2875	-	ENSSHAP00000007959	271 (aa)	-	G3VXQ4

Gene Model

Click here to download ENSSHAG00000006906's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000006906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000006906	-	96	66.540	ENSSHAG00000006029	-	60	76.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000006906	-	100	97.786	ENSG00000134748	PRPF38A	87	97.786	Homo_sapiens
ENSSHAG00000006906	-	66	82.222	ENSAPOG00000011652	prpf38a	86	76.471	Acanthochromis_polyacanthus
ENSSHAG00000006906	-	100	97.786	ENSAMEG00000009319	PRPF38A	87	97.786	Ailuropoda_melanoleuca
ENSSHAG00000006906	-	66	81.006	ENSACIG00000012292	prpf38a	62	80.423	Amphilophus_citrinellus
ENSSHAG00000006906	-	66	82.222	ENSAOCG00000018004	prpf38a	86	76.471	Amphiprion_ocellaris
ENSSHAG00000006906	-	66	82.222	ENSAPEG00000021414	prpf38a	86	76.471	Amphiprion_percula
ENSSHAG00000006906	-	54	91.724	ENSATEG00000004608	prpf38a	86	76.103	Anabas_testudineus
ENSSHAG00000006906	-	92	97.177	ENSAPLG00000005827	PRPF38A	99	97.177	Anas_platyrhynchos
ENSSHAG00000006906	-	100	92.989	ENSACAG00000008249	PRPF38A	87	92.620	Anolis_carolinensis
ENSSHAG00000006906	-	100	97.786	ENSANAG00000027839	PRPF38A	87	97.786	Aotus_nancymaae
ENSSHAG00000006906	-	94	71.321	ENSANAG00000029204	-	83	69.262	Aotus_nancymaae
ENSSHAG00000006906	-	66	80.556	ENSACLG00000021595	prpf38a	86	75.368	Astatotilapia_calliptera
ENSSHAG00000006906	-	100	76.838	ENSAMXG00000029274	prpf38a	87	76.838	Astyanax_mexicanus
ENSSHAG00000006906	-	100	97.786	ENSBTAG00000002720	PRPF38A	87	97.786	Bos_taurus
ENSSHAG00000006906	-	100	97.786	ENSCJAG00000021594	PRPF38A	87	97.786	Callithrix_jacchus
ENSSHAG00000006906	-	100	97.786	ENSCAFG00000003740	PRPF38A	87	97.786	Canis_familiaris
ENSSHAG00000006906	-	100	97.786	ENSCAFG00020010939	PRPF38A	87	97.786	Canis_lupus_dingo
ENSSHAG00000006906	-	100	97.786	ENSCHIG00000024730	PRPF38A	87	97.786	Capra_hircus
ENSSHAG00000006906	-	100	97.786	ENSTSYG00000009868	-	87	97.786	Carlito_syrichta
ENSSHAG00000006906	-	99	97.037	ENSTSYG00000031994	-	95	97.037	Carlito_syrichta
ENSSHAG00000006906	-	100	97.786	ENSCPOG00000005079	PRPF38A	87	97.786	Cavia_porcellus
ENSSHAG00000006906	-	100	97.417	ENSCCAG00000026502	PRPF38A	86	97.417	Cebus_capucinus
ENSSHAG00000006906	-	99	64.815	ENSCATG00000044190	-	87	62.963	Cercocebus_atys
ENSSHAG00000006906	-	100	97.786	ENSCATG00000032296	PRPF38A	87	97.786	Cercocebus_atys
ENSSHAG00000006906	-	100	97.786	ENSCLAG00000005816	PRPF38A	87	97.786	Chinchilla_lanigera
ENSSHAG00000006906	-	74	94.444	ENSCHOG00000008388	PRPF38A	64	94.444	Choloepus_hoffmanni
ENSSHAG00000006906	-	100	97.048	ENSCPBG00000014791	PRPF38A	87	97.048	Chrysemys_picta_bellii
ENSSHAG00000006906	-	62	68.639	ENSCSAVG00000009580	-	64	63.918	Ciona_savignyi
ENSSHAG00000006906	-	95	97.674	ENSCANG00000032608	PRPF38A	86	97.674	Colobus_angolensis_palliatus
ENSSHAG00000006906	-	70	82.105	ENSCGRG00001002557	-	64	81.579	Cricetulus_griseus_chok1gshd
ENSSHAG00000006906	-	100	97.417	ENSCGRG00001018502	-	87	97.417	Cricetulus_griseus_chok1gshd
ENSSHAG00000006906	-	100	97.417	ENSCGRG00000014868	Prpf38a	87	97.417	Cricetulus_griseus_crigri
ENSSHAG00000006906	-	66	81.564	ENSCSEG00000001269	prpf38a	65	80.952	Cynoglossus_semilaevis
ENSSHAG00000006906	-	66	84.444	ENSCVAG00000012305	prpf38a	86	77.206	Cyprinodon_variegatus
ENSSHAG00000006906	-	100	77.941	ENSDARG00000039213	prpf38a	87	77.574	Danio_rerio
ENSSHAG00000006906	-	100	97.786	ENSDNOG00000042326	PRPF38A	87	97.786	Dasypus_novemcinctus
ENSSHAG00000006906	-	82	78.378	ENSDORG00000023691	-	63	82.796	Dipodomys_ordii
ENSSHAG00000006906	-	82	78.378	ENSDORG00000025371	-	63	82.796	Dipodomys_ordii
ENSSHAG00000006906	-	100	82.288	ENSDORG00000023857	-	84	98.148	Dipodomys_ordii
ENSSHAG00000006906	-	72	76.531	ENSEBUG00000012588	prpf38a	61	76.440	Eptatretus_burgeri
ENSSHAG00000006906	-	100	97.786	ENSEASG00005014427	PRPF38A	87	97.786	Equus_asinus_asinus
ENSSHAG00000006906	-	100	97.786	ENSECAG00000022628	PRPF38A	87	97.786	Equus_caballus
ENSSHAG00000006906	-	66	82.222	ENSELUG00000021094	prpf38a	86	75.368	Esox_lucius
ENSSHAG00000006906	-	100	97.786	ENSFCAG00000002518	PRPF38A	87	97.786	Felis_catus
ENSSHAG00000006906	-	100	94.465	ENSFALG00000005598	-	99	94.096	Ficedula_albicollis
ENSSHAG00000006906	-	99	81.111	ENSFALG00000003612	-	63	85.263	Ficedula_albicollis
ENSSHAG00000006906	-	100	97.417	ENSFDAG00000011287	PRPF38A	87	97.417	Fukomys_damarensis
ENSSHAG00000006906	-	81	72.197	ENSFHEG00000014317	prpf38a	64	82.632	Fundulus_heteroclitus
ENSSHAG00000006906	-	100	94.465	ENSGALG00000010627	PRPF38A	87	94.096	Gallus_gallus
ENSSHAG00000006906	-	66	84.444	ENSGAFG00000012422	prpf38a	86	77.206	Gambusia_affinis
ENSSHAG00000006906	-	66	79.121	ENSGACG00000005423	prpf38a	86	73.723	Gasterosteus_aculeatus
ENSSHAG00000006906	-	100	96.679	ENSGAGG00000020547	PRPF38A	87	96.679	Gopherus_agassizii
ENSSHAG00000006906	-	100	97.786	ENSGGOG00000003940	PRPF38A	87	97.786	Gorilla_gorilla
ENSSHAG00000006906	-	54	88.435	ENSHBUG00000020572	prpf38a	62	88.356	Haplochromis_burtoni
ENSSHAG00000006906	-	99	82.222	ENSHGLG00000007918	-	85	80.370	Heterocephalus_glaber_female
ENSSHAG00000006906	-	100	97.786	ENSHGLG00000000475	PRPF38A	87	97.786	Heterocephalus_glaber_female
ENSSHAG00000006906	-	99	82.222	ENSHGLG00100003928	-	85	80.370	Heterocephalus_glaber_male
ENSSHAG00000006906	-	100	97.786	ENSHGLG00100008935	PRPF38A	87	97.786	Heterocephalus_glaber_male
ENSSHAG00000006906	-	95	78.599	ENSIPUG00000005757	prpf38a	86	78.067	Ictalurus_punctatus
ENSSHAG00000006906	-	100	97.786	ENSSTOG00000015610	PRPF38A	87	97.786	Ictidomys_tridecemlineatus
ENSSHAG00000006906	-	100	97.048	ENSJJAG00000015811	Prpf38a	87	97.048	Jaculus_jaculus
ENSSHAG00000006906	-	66	83.889	ENSKMAG00000006588	prpf38a	86	76.838	Kryptolebias_marmoratus
ENSSHAG00000006906	-	95	72.374	ENSLBEG00000020585	prpf38a	86	73.897	Labrus_bergylta
ENSSHAG00000006906	-	100	89.299	ENSLACG00000011495	PRPF38A	87	88.930	Latimeria_chalumnae
ENSSHAG00000006906	-	100	77.122	ENSLOCG00000006262	prpf38a	86	78.598	Lepisosteus_oculatus
ENSSHAG00000006906	-	100	97.786	ENSLAFG00000025862	PRPF38A	87	97.786	Loxodonta_africana
ENSSHAG00000006906	-	100	97.786	ENSMFAG00000039449	PRPF38A	87	97.786	Macaca_fascicularis
ENSSHAG00000006906	-	99	98.148	ENSMMUG00000014333	PRPF38A	97	98.148	Macaca_mulatta
ENSSHAG00000006906	-	99	64.815	ENSMNEG00000040242	-	87	63.333	Macaca_nemestrina
ENSSHAG00000006906	-	100	97.786	ENSMNEG00000031221	PRPF38A	87	97.786	Macaca_nemestrina
ENSSHAG00000006906	-	100	97.786	ENSMLEG00000041105	PRPF38A	87	97.786	Mandrillus_leucophaeus
ENSSHAG00000006906	-	66	81.667	ENSMAMG00000015431	prpf38a	86	76.103	Mastacembelus_armatus
ENSSHAG00000006906	-	66	80.556	ENSMZEG00005017838	prpf38a	86	75.368	Maylandia_zebra
ENSSHAG00000006906	-	70	92.105	ENSMGAG00000011176	PRPF38A	63	91.579	Meleagris_gallopavo
ENSSHAG00000006906	-	82	91.480	ENSMAUG00000018029	-	72	90.526	Mesocricetus_auratus
ENSSHAG00000006906	-	100	97.786	ENSMICG00000014193	PRPF38A	87	97.786	Microcebus_murinus
ENSSHAG00000006906	-	100	97.417	ENSMOCG00000013080	Prpf38a	87	97.417	Microtus_ochrogaster
ENSSHAG00000006906	-	80	75.115	ENSMMOG00000016972	prpf38a	66	81.053	Mola_mola
ENSSHAG00000006906	-	100	99.631	ENSMODG00000000644	PRPF38A	87	99.631	Monodelphis_domestica
ENSSHAG00000006906	-	66	82.222	ENSMALG00000019363	prpf38a	84	76.471	Monopterus_albus
ENSSHAG00000006906	-	100	96.310	MGP_CAROLIEiJ_G0026269	Prpf38a	87	96.310	Mus_caroli
ENSSHAG00000006906	-	100	96.310	ENSMUSG00000063800	Prpf38a	87	96.310	Mus_musculus
ENSSHAG00000006906	-	100	96.310	MGP_PahariEiJ_G0028602	Prpf38a	87	96.310	Mus_pahari
ENSSHAG00000006906	-	100	94.465	MGP_SPRETEiJ_G0027238	Prpf38a	87	94.096	Mus_spretus
ENSSHAG00000006906	-	100	97.786	ENSMPUG00000006896	PRPF38A	87	97.786	Mustela_putorius_furo
ENSSHAG00000006906	-	100	97.417	ENSNGAG00000011884	Prpf38a	87	97.417	Nannospalax_galili
ENSSHAG00000006906	-	66	79.330	ENSNBRG00000004013	prpf38a	61	78.836	Neolamprologus_brichardi
ENSSHAG00000006906	-	100	97.786	ENSNLEG00000017999	PRPF38A	87	97.786	Nomascus_leucogenys
ENSSHAG00000006906	-	96	70.881	ENSNLEG00000012592	-	85	71.648	Nomascus_leucogenys
ENSSHAG00000006906	-	99	62.593	ENSNLEG00000033398	-	79	61.111	Nomascus_leucogenys
ENSSHAG00000006906	-	100	94.096	ENSMEUG00000003860	PRPF38A	87	93.358	Notamacropus_eugenii
ENSSHAG00000006906	-	73	96.985	ENSOPRG00000008985	PRPF38A	83	96.985	Ochotona_princeps
ENSSHAG00000006906	-	100	97.786	ENSODEG00000005869	PRPF38A	87	97.786	Octodon_degus
ENSSHAG00000006906	-	66	81.111	ENSONIG00000007816	prpf38a	86	75.735	Oreochromis_niloticus
ENSSHAG00000006906	-	56	94.702	ENSOANG00000009541	-	87	58.974	Ornithorhynchus_anatinus
ENSSHAG00000006906	-	100	97.786	ENSOCUG00000000963	PRPF38A	87	97.786	Oryctolagus_cuniculus
ENSSHAG00000006906	-	96	76.834	ENSORLG00000013485	prpf38a	86	77.122	Oryzias_latipes
ENSSHAG00000006906	-	96	76.834	ENSORLG00020002130	prpf38a	86	77.122	Oryzias_latipes_hni
ENSSHAG00000006906	-	96	76.448	ENSORLG00015021393	prpf38a	86	76.753	Oryzias_latipes_hsok
ENSSHAG00000006906	-	95	76.265	ENSOMEG00000016333	prpf38a	86	76.471	Oryzias_melastigma
ENSSHAG00000006906	-	100	97.786	ENSOGAG00000005423	PRPF38A	87	97.786	Otolemur_garnettii
ENSSHAG00000006906	-	100	97.786	ENSOARG00000005373	PRPF38A	87	97.786	Ovis_aries
ENSSHAG00000006906	-	100	97.786	ENSPPAG00000030905	PRPF38A	87	97.786	Pan_paniscus
ENSSHAG00000006906	-	99	73.333	ENSPPAG00000033867	-	85	74.815	Pan_paniscus
ENSSHAG00000006906	-	100	97.786	ENSPPRG00000013268	PRPF38A	87	97.786	Panthera_pardus
ENSSHAG00000006906	-	100	97.786	ENSPTIG00000015419	PRPF38A	87	97.786	Panthera_tigris_altaica
ENSSHAG00000006906	-	100	97.786	ENSPTRG00000000739	PRPF38A	87	97.786	Pan_troglodytes
ENSSHAG00000006906	-	100	97.786	ENSPANG00000015483	PRPF38A	87	97.786	Papio_anubis
ENSSHAG00000006906	-	100	74.539	ENSPKIG00000011439	prpf38a	86	74.539	Paramormyrops_kingsleyae
ENSSHAG00000006906	-	100	97.417	ENSPSIG00000017487	PRPF38A	87	97.417	Pelodiscus_sinensis
ENSSHAG00000006906	-	78	77.358	ENSPMGG00000021352	prpf38a	85	73.783	Periophthalmus_magnuspinnatus
ENSSHAG00000006906	-	100	91.209	ENSPEMG00000011212	-	86	89.744	Peromyscus_maniculatus_bairdii
ENSSHAG00000006906	-	100	97.417	ENSPEMG00000023277	-	87	97.417	Peromyscus_maniculatus_bairdii
ENSSHAG00000006906	-	100	99.262	ENSPCIG00000022369	-	87	99.262	Phascolarctos_cinereus
ENSSHAG00000006906	-	80	74.771	ENSPFOG00000004248	prpf38a	86	77.206	Poecilia_formosa
ENSSHAG00000006906	-	91	72.112	ENSPLAG00000010328	prpf38a	86	77.206	Poecilia_latipinna
ENSSHAG00000006906	-	81	74.554	ENSPMEG00000011804	prpf38a	87	77.206	Poecilia_mexicana
ENSSHAG00000006906	-	100	92.674	ENSPPYG00000001348	PRPF38A	86	92.308	Pongo_abelii
ENSSHAG00000006906	-	100	97.048	ENSPCAG00000013328	PRPF38A	87	97.048	Procavia_capensis
ENSSHAG00000006906	-	100	97.786	ENSPCOG00000016387	-	87	97.786	Propithecus_coquereli
ENSSHAG00000006906	-	100	74.539	ENSPCOG00000020709	-	62	79.474	Propithecus_coquereli
ENSSHAG00000006906	-	100	97.786	ENSPVAG00000009803	PRPF38A	87	97.786	Pteropus_vampyrus
ENSSHAG00000006906	-	66	80.556	ENSPNYG00000005571	prpf38a	86	75.368	Pundamilia_nyererei
ENSSHAG00000006906	-	100	76.838	ENSPNAG00000010399	prpf38a	87	76.838	Pygocentrus_nattereri
ENSSHAG00000006906	-	100	97.048	ENSRNOG00000009451	Prpf38a	87	97.048	Rattus_norvegicus
ENSSHAG00000006906	-	99	58.148	ENSRBIG00000034053	-	57	75.694	Rhinopithecus_bieti
ENSSHAG00000006906	-	100	97.786	ENSRBIG00000036442	PRPF38A	87	97.786	Rhinopithecus_bieti
ENSSHAG00000006906	-	100	97.786	ENSRROG00000032788	PRPF38A	87	97.786	Rhinopithecus_roxellana
ENSSHAG00000006906	-	98	79.623	ENSRROG00000040003	-	88	78.868	Rhinopithecus_roxellana
ENSSHAG00000006906	-	99	58.889	ENSRROG00000034606	-	56	75.000	Rhinopithecus_roxellana
ENSSHAG00000006906	-	100	97.786	ENSSBOG00000019515	PRPF38A	87	97.786	Saimiri_boliviensis_boliviensis
ENSSHAG00000006906	-	100	74.539	ENSSFOG00015013572	prpf38a	86	76.015	Scleropages_formosus
ENSSHAG00000006906	-	66	82.222	ENSSMAG00000015379	prpf38a	61	81.579	Scophthalmus_maximus
ENSSHAG00000006906	-	66	82.778	ENSSDUG00000001324	prpf38a	86	76.838	Seriola_dumerili
ENSSHAG00000006906	-	66	82.778	ENSSLDG00000014803	prpf38a	86	76.838	Seriola_lalandi_dorsalis
ENSSHAG00000006906	-	80	97.685	ENSSARG00000014458	PRPF38A	69	97.685	Sorex_araneus
ENSSHAG00000006906	-	100	96.310	ENSSPUG00000013259	PRPF38A	87	96.310	Sphenodon_punctatus
ENSSHAG00000006906	-	66	60.335	ENSSPAG00000010449	prpf38a	56	60.847	Stegastes_partitus
ENSSHAG00000006906	-	100	97.786	ENSSSCG00000028288	PRPF38A	87	97.786	Sus_scrofa
ENSSHAG00000006906	-	99	94.444	ENSTGUG00000008995	PRPF38A	86	94.074	Taeniopygia_guttata
ENSSHAG00000006906	-	66	81.667	ENSTRUG00000003374	prpf38a	58	81.053	Takifugu_rubripes
ENSSHAG00000006906	-	66	79.670	ENSTNIG00000005533	prpf38a	86	74.453	Tetraodon_nigroviridis
ENSSHAG00000006906	-	100	97.048	ENSTBEG00000000725	PRPF38A	87	97.048	Tupaia_belangeri
ENSSHAG00000006906	-	100	97.786	ENSTTRG00000016139	PRPF38A	87	97.786	Tursiops_truncatus
ENSSHAG00000006906	-	100	97.786	ENSUAMG00000000625	PRPF38A	87	97.786	Ursus_americanus
ENSSHAG00000006906	-	100	97.786	ENSUMAG00000022674	PRPF38A	87	97.786	Ursus_maritimus
ENSSHAG00000006906	-	70	94.737	ENSVPAG00000000907	PRPF38A	87	89.299	Vicugna_pacos
ENSSHAG00000006906	-	100	97.786	ENSVVUG00000004475	PRPF38A	87	97.786	Vulpes_vulpes
ENSSHAG00000006906	-	100	80.882	ENSXETG00000008060	prpf38a	87	85.294	Xenopus_tropicalis
ENSSHAG00000006906	-	66	82.320	ENSXCOG00000007393	prpf38a	63	81.675	Xiphophorus_couchianus
ENSSHAG00000006906	-	66	84.444	ENSXMAG00000026143	prpf38a	86	77.206	Xiphophorus_maculatus